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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000345_pilon:212798..216289- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020099.2 ID=XLOC_020099.2|Name=XLOC_020099.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3492bp|location=Sequence derived from alignment at sc0000345_pilon:212798..216289- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAG
CAGCACTCCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAG
TTTCTAACGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGGTAAGGT
CTTCACTGAATTAAACTTTTCGAATCAATTGCGGGTTTTTCCGGTGTTTC
TAGGGAACATACTTCCACCAAGAATTTCAAACTAAAAATTCAATTTCACT
AGACTAAATGTGCGAGAAATTAAGCTCGAAGTGTGAAGGGCATTGACCCC
TGAGGTGGTCGATCGATGTAGACAAAAAAAATAAACAGAAAGGAATCCCT
ATATCAACGCCGTATTTACCTAACAGTTCAAAAGCCCCTAACAGTTCAAA
TTCCTAAAAATTTGAAAGCTGCTGCGGTAAAAAGTCACAAATGTTATTTT
TCCCTTTTTTCTGGCTCCTTTGTTTGATTTGAAATGACTGACAATGGGGA
CTCCCTCTCTCAAATTGACATTTCAAGTACCAATATCCTAGCGTGATTAG
GCATTTGGCAAATCCCGGGAAACCGAACAATAGAACAGAAGAATTGAACT
CTAAGGAATACTGCAATCAAGCGCCCCTGTTGTTCACCCTCCTTCCATCA
TTGAACCCTACAGAAAGTTTATTGAAAATCAATTATGACTTACAAAGGAA
TCGTGATGGAATTAAAAGAAATCGTGCTAATGTCATTGTATTCCTTCATC
GATTCTCCCCTAGAAAAATATCAAAGTACTGTGCGAGTCGCATCATATTC
TGTAGGTGATAAACCTTAATTTCAGGAAAAGAAACGAAGTACAGAACAGC
GAACAATATTGTGAAACGATTGATACTACACCACTAGGGTATGTCATCTT
CTTTACCGATCTGCTTCGATTCAAGAAAGTTGGAAAAAAGAAGATACCTA
TATACTATATATGAATGTCGTCAATATGATTTTAAAGGAGGGATAAAAGT
TATTTATAGCGTTATTGTGGCTAATTTGACTAATGGGTTCCTTTAATAAG
TAAAAAGTTGAAATTTTCCTATTTTCCCAACCCTTGCAGAGACTTTCAGA
TTCCAAAATGGCACCCCTAAGGGCGGTTCATACCCATACACTCCGTACAA
TACACTTGCCTAGCTATCTCCCGGGCTTTAAAAAAGGATTCAGGCATCAC
TGGTGGACCTGGTGTGTTATGTTGTGGCTTTTAAAGATTTAAATTGTTAA
TATTATTTAATATTTATTCTGAATATTTTACTTGCAATAAAAAATTCCAG
AGTCATACAACGCTTTTTTTAATAAGAATAGTGTACTTTGGATGAGGGTC
AAGTATTCTTAAGAAATGCTAAAATTGAGGGTGAAATATTCTTAACTTAT
TCTTACGTTTTTAGACTTGACTTCTTTACAAACATGAGAAATAATCAATC
TGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTAAATTGCTT
CCTCAAGGTTCAATTTATTTCTAACCAGAGTCCGTATAAAAAACCCTGGT
CTGGAAGCTTATTGTTTTAACTTTTTGTTAGCTTTTTCCTTTGTTAATAT
CAAAAGATAGAAATCGACTAGCTCAGTATTTGATCACGTTACCAAATACT
CCTCTTGGGATTGGTTTAAGATTTAATCACGTGATCAAAAAGTGAGCAAA
ACAAACTAATTTCTCAACACAAGTTCAAGTAAGTAACAATGGAAAGAAAC
AAAAGGCTTCCAGACCAGGGTTTTTTATACGGACTATGCTCTAACAAAGG
AAGCAGTTTTTCTCATCCTAGAGGGTATTCTTACGATTTGGCCAATTTTC
ACCCTGATACTCTCATAGAAGATATTCTTATAAAAAAAGCGTGTATTTAT
TTTTCAGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGAT
ATCCCGTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTT
TGCAGATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGGTA
AGTAACGCTCTGCTGTGGGCCACGGGCTGTACATTATTAACGTTTCTTAA
ACGATACAATTATGGATATTCCGAGCTTTAAGTTCAAGGCAAAAAGTATT
AAGATTACGTAAGGCATAATCGAGAAAAAGAGAAAGACGAGTATAACTTA
TAATTAACAAAGGAGCTCTACACAATTCCGAAGAATCAACCTTTGAAAGT
ACTTACGCTAAAAGTACTCTCACTAATCTGAACTCGAAGATGGAGTCAAA
CTTGTTTGAGTTAAATGAAATTGGGTAATTAAATTTCTATTATAGATAAT
AGACGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGC
TTCCATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCA
AAAATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGT
ATTCAATCTTATTACTTTTAGATACAATAGTGTCAAAAAAAAACAAGAAT
CTTGGTCAAACGTTAAAAAATCTTTCTATTGATTTACCCAAACCAATTTG
ACAATCTTTTTACTTTTGCCAGAAAGCAAAATATAGATTTAGCTCCCAAA
GCTATACAGGTCTGCATTTTTGACGATTTCTAAAAAATTATTTTCAACAA
CACTCTTAATCCTTCAAGCATCTCGTCAAGCACTTAAAACGAAAAACTTT
TTTAATAACTTTTGAAATATTTATCCAATTGACAAGTTTGTCAGTATGCA
CCAAATATGGATTGACATAATTGGTAAAAATCTCTGTATTACCTTATCGG
CCAAAATTAGTCGGCCTCAATTTTAGTCGCCCCAAAATTTTAGTCGGCCC
TAATTTTAGTTACCGAGCCAAAATTTAGTCACTTAGAGCCGAGTAAGTTT
TGGCCGATAAGGTATAAAAAACTTCATCGTCACTTGATGACGTCATCTAT
TTTACTAAATTTTGTGATATACCTTATCGGGGGGAAGAAACTCGGGGATA
AGTGACTAATTATCTAATTAACTAATTAAGTAACTAATTGAAATTAAAAT
TTTCCCCGACTCAAAAAAATACCGGCTTTTTTTTCCTCGATAAGGTAGTG
TTCTCGTCTCCTGATTCACCCTTGCGTTTCTGTAGCTTATACATAGATGA
TGTTCTTTACCTGTTATAAATTGCTTTAATCTCAGGTTATCCGAAGATCT
GTATTGACGACAAAGGAAAGATAAAGGCGGCGTCAATACAGATCAATCAA
ACTGAAGAGGAGCTTAATGAATTTTTCGTACAAAACTTTCCAAATTTGAG
GCGGTCACCGATATATTTTTTTAAAATCGGCAACCATGGAAAATATGTGC
CCCTCCAGATCAAAACCCCTCAAGACTTGAGAAATTTGGCAAAAGACGGG
AAACGCTACCAAGGCATCGTTATTGTTACGAATCACGACCTT Coding sequence (CDS) from alignment at sc0000345_pilon:212798..216289- >XLOC_020099.2 ID=XLOC_020099.2|Name=XLOC_020099.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1512bp|location=Sequence derived from alignment at sc0000345_pilon:212798..216289- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAG
CAGCACTCCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAG
TTTCTAACGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGATGGCAA
ACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAGCAGCACT
CCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAGTTTCTAA
CGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGGAAAAGAAACGAAG
TACAGAACAGCGAACAATATTGTGAAACGATTGATACTACACCACTAGGG
AAAAGAAACGAAGTACAGAACAGCGAACAATATTGTGAAACGATTGATAC
TACACCACTAGGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCG
CGGATATCCCGTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAAC
ACCTTTGCAGATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGA
TGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCC
GTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTTTGCAG
ATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGATAATAGA
CGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTC
CATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCAAAA
ATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGATAAT
AGACGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGC
TTCCATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCA
AAAATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGT
TATCCGAAGATCTGTATTGACGACAAAGGAAAGATAAAGGCGGCGTCAAT
ACAGATCAATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTACAAAACT
TTCCAAATTTGAGGCGGTCACCGATATATTTTTTTAAAATCGGCAACCAT
GGAAAATATGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGAGAAATTT
GGCAAAAGACGGGAAACGCTACCAAGGCATCGTTATTGTTACGAATCACG
ACCTTGTTATCCGAAGATCTGTATTGACGACAAAGGAAAGATAAAGGCGG
CGTCAATACAGATCAATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTA
CAAAACTTTCCAAATTTGAGGCGGTCACCGATATATTTTTTTAAAATCGG
CAACCATGGAAAATATGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGA
GAAATTTGGCAAAAGACGGGAAACGCTACCAAGGCATCGTTATTGTTACG
AATCACGACCTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000345_pilon | genome | sc0000345_pilon:212798..216289 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-756:256 |
| Aaloc | 349-498:1146 |
| Aaloc | 208-345:1585 |
| Aaloc | 145-204:2667 |
| Aaloc | 1-141:3493 |
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