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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000377_pilon:238206..241698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020099 ID=XLOC_020099|Name=XLOC_020099|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3493bp|location=Sequence derived from alignment at sc0000377_pilon:238206..241698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAG
CAGCACTCCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAG
TTTCTAACGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGGTAAGGT
CTTCACTGAATTAAACTTTTCGAATCAATTGCGGGTTTTTCCGGTGTTTC
TAGGGAACATACTTCCACCAAGAATTTCAAACTAAAAATTCAATTTCACT
AGACTAAATGTGCGAGAAATTAAGCTCGAAGTGTGAAGGGCATTGACCCC
TGAGGTGGTCGATCGATGTAGACAAAAAAAATAAACAGAAAGGAATCCCT
ATATCAACGCCGTATTTACCTAACAGTTCAAAAGCCCCCTAACAGTTCAA
AATCCTAAAAATTTGAAAGCTGCTGCGGTAAAAAGTCACAAATGTTATTT
TTCCCTTTTTTCTGGCTCCTTTGTTTGATTTGAAATGACTGACAATGGGG
ACTCCCTCTCTCAAATTGACATTTCAAGTACCAATATCCTAGCGTCATTA
GGCATTTGGCAAATCCCGGGAAACCGAACAATAGAACAGAAGAATTGAAC
TCTAAGGAATACTGCAATCAAGCGCCCCTGTTGTTCACCCTCCTTCCATC
ATTGAACCCTACAGAAAGTTTATTGAAAATCAATTATGACTTACAAAGGA
ATCGTGATGGAATTAAAAGAAATCGTGCTAATGTCATTGTATTCCTTCAT
CGATTCTCCCCTAGAAAAATATCAAAGTACTGTGCGAGTCGCATCATATT
CTGTAGGTGATAAACCTTAATTTCAGGAAAAGAAACGAAGTACAGAACAG
CGAACAATATTGTGAAACGATTGATACTACACCACTAGGGTATGTCATCT
TCTTTACCGATCTGCTTCGATTCAAGAAAGTTGGAAAAAAGAAGATACCT
ATATACTATATATGAATGTCGTCAATATGATTTTAAAGGAGGGATAAAAG
TTATTTATAGCGTTATTGTGGCTAATTTGACTAATGGGTTCCTTTAATAA
GTAAAAAGTTGAAATTTTCCTATTTTCCCAACCCTTGCAGAGACTTTCAG
ATTCCAAAATGGCACCCCTAAGGGCGGTTCATACCCATACACTCCGTACA
ATACACTTGCCTAGCTATCTCCCGGGCTTTAAAAAAGGATTCAGGCATCA
CTGGTGGACCTGGTGTGTTATTTTGTGGCTTTTAAAGATTTAAATTGTTA
ATATTATTTAATATTTATTCTGAATATTTTACTTGCAATAAAAAATTCCA
GAGTCATACAACGCTTTTTTTAATAAGAATAGTGTACTTTGGATGAGGGT
CAAGTATTCTTAAGAAATTGCTAAAATTGAGGGTGAAATATTCTTAACTT
ATTCTTACGTTTTTAGACTTGACTTCTTTACAAACATGAGAAATAATCAA
TCTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTTAAAATTAAATTGC
TTCCTCAAGGTTCAATTTATTTCTAACCAGAGTCCGTATAAAAAACCCTG
GTCTGGAAGCTTATTGTTTTAACTTTTTGTTAGCTTTTTCCTTTGTTAAT
ATCAAAAGATAGAAATCGACTAGCTCAGTATTTGATCACGTTACCAAATA
CTCCTCTTGGGATTGGTTTAAGATTTAATCACGTGATCAAAAAGTGAGCA
AAACAAACTAATTTCTCAACACAAGTTCAAGTAAGTAACAATGGAAAGAA
ACAAAAGGCTTCCAGACCAGGGTTTTTTATACGGACTATGCTCTAACAAA
GGAAGCAGTTTTTCTCATCCTAGAGGGTATTCTTACGATTTGGCCAATTT
TCACCCTGATACTCTCATAGAAGATATTCTTATAAAAAAAGCGTGTATTT
ATTTTTCAGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGG
ATATCCCGTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACC
TTTGCAGATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGG
TAAGTAACGCTCTGCTGTGGGCCACGGGCTGTACATTATTAACGTTTCTT
AAACGATACAATTATGGATATTCCGAGCTTTAAGTTCAAGGCAAAAAGTA
TTAAGATTACGTAAGGCATAATCGAGAAAAAGAGAAAGACGAGTATAACT
TATAATTAACAAAGGAGCTCTACACAATTCCGAAGAATCAACCTTTGAAA
GTACTTACGCTAAAAGTACTCTCACTAATCTGAACTCGAAGATGGAGTCA
AACTTGTTTGAGTTAAATGAAATTGGGTAATTAAATTTCTATTATAGATA
ATAGACGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGA
GCTTCCATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATT
CAAAAATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACG
GTATTCAATCTTATTACTTTTAGATACAATAGTGTCAAAAAAAACAAGAA
TCTTGGTCAAACGTTAAAAAATCTTTCTATTGATTTACCCAAACCAATTT
GACAATCTTTTTACTTTTGCCAGAAAGCAAAATATAGATTTAGCTCCCAA
AGCTATACAGGTCTGCATTTTTGACGATTTCTAAAAAATTATTTTCAACA
ACACTCTTAATCCTTCAAGCATCTCGTCAAGCACTTAAAACGAAAAACTT
TTTTAATAACTTTTGAAATATTTATCCAATTGACAAGTTTGTCAGTATGC
ACCAAATATGGATTGACATAATTGGTAAAAATCTCTGTATTACCTTATCG
GCCAAAATTAGTCGGCCTCAATTTTAGTCGCCCCAAAATTTTAGTCGGCC
CTAATTTTAGTTACCGAGCCAAAATTTAGTCACTTAGAGCCGAGTAAGTT
TTGGCCGATAAGGTATAAAAAACTTCATCGTCACTTGATGACGTCATCTA
TTTTACTAAATTTTGTGATATACCTTATCGGGGGGAAGAAACTCGGGGAT
AAGTGACTAATTATCTAATTAACTAATTAAGTAACTAATTAAAATTAAAA
TTTTCCCCGACTCAAAAAAATACCGGCTTTTTTTTCCTCGATAAGGTAGT
GTTCTCGTCTCCTGATTCACCCTTGCGTTTCTGTAGCTTATACATAGATG
ATGTTCTTTACCTGTTATAAATTGCTTTAATCTCAGGTTATCCGAAGATC
TGTATTGACGACAAAGGAAAGATAAAGGCGGCGTCAATACAGATCAATCA
AACTGAAGAGGAGCTTAATGAATTTTTCGTACAAAACTTTCCAAATTTGA
GGCGGTCACCGATATATTTTTTTAAAATCGGCAACCATGGAAAATATGTG
CCCCTCCAGATCAAAACCCCTCAAGACTTGAGAAATTTAGCAAAAGACGG
GAAACGCTACCAAGGCATTGTTATTGTTACGAATCACGACCTT Coding sequence (CDS) from alignment at sc0000377_pilon:238206..241698- >XLOC_020099 ID=XLOC_020099|Name=XLOC_020099|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1512bp|location=Sequence derived from alignment at sc0000377_pilon:238206..241698- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAAACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAG
CAGCACTCCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAG
TTTCTAACGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGATGGCAA
ACTTCGTATCGTCGTCCTTCCCAAAAGAAATGTACATTGATAGCAGCACT
CCTGAGGGACAAGGAATGTTCCACCGTGTGCTACTCAATGAAGTTTCTAA
CGAAGAATTGGAGTTATTTTATCAAGATCAAAATAGGAAAAGAAACGAAG
TACAGAACAGCGAACAATATTGTGAAACGATTGATACTACACCACTAGGG
AAAAGAAACGAAGTACAGAACAGCGAACAATATTGTGAAACGATTGATAC
TACACCACTAGGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCG
CGGATATCCCGTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAAC
ACCTTTGCAGATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGA
TGCAGAGAAATGGAATGGAAAGAGAATGACTTGCCATTCGCGGATATCCC
GTTGTTATTAGGTGATGGGTTTGAAGAAAAAGTTGAGAACACCTTTGCAG
ATGTACAGTTGGCAAGGACCTTTTCTTTTGCCAGAAAGGATGATAATAGA
CGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGCTTC
CATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCAAAA
ATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGATAAT
AGACGAAACACCGGTACAAAGAAAACACGGGGCCCTGGTGTATCAAGAGC
TTCCATAAAGTTTTATCATCTCCCTGAAGCGTCGGAGAGGCCAAAATTCA
AAAATCTCGATTGTGCAGTAGTAAAAAGGCACATGTCAAAAGGCTACGGT
TATCCGAAGATCTGTATTGACGACAAAGGAAAGATAAAGGCGGCGTCAAT
ACAGATCAATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTACAAAACT
TTCCAAATTTGAGGCGGTCACCGATATATTTTTTTAAAATCGGCAACCAT
GGAAAATATGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGAGAAATTT
AGCAAAAGACGGGAAACGCTACCAAGGCATTGTTATTGTTACGAATCACG
ACCTTGTTATCCGAAGATCTGTATTGACGACAAAGGAAAGATAAAGGCGG
CGTCAATACAGATCAATCAAACTGAAGAGGAGCTTAATGAATTTTTCGTA
CAAAACTTTCCAAATTTGAGGCGGTCACCGATATATTTTTTTAAAATCGG
CAACCATGGAAAATATGTGCCCCTCCAGATCAAAACCCCTCAAGACTTGA
GAAATTTAGCAAAAGACGGGAAACGCTACCAAGGCATTGTTATTGTTACG
AATCACGACCTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000377_pilon | genome | sc0000377_pilon:238206..241698 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 502-756:256 |
| Aaloc | 349-498:1145 |
| Aaloc | 208-345:1584 |
| Aaloc | 145-204:2667 |
| Aaloc | 1-141:3494 |
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