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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000269_pilon:278329..282455+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_020052 ID=XLOC_020052|Name=XLOC_020052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4127bp|location=Sequence derived from alignment at sc0000269_pilon:278329..282455+ (Clytia hemisphaerica_ch_hm2_pilon)
agaCACGCGGAGGTAATGAAGAAGATTATTTCCACAGTCCAAGATGGCGG
CGGTGATATTGGTGTTCATATGtgagttttgttttaaattttatactCGC
ACAGTCGGCCATACCTtaccctttaactgccgatgACGGCACATATGCCG
ATATGGAcgctttcgatttctttgcaaATGTCGGCATTTGCCGGCATGag
cactttccatttctttgccgccgttttttttaagttgaatttgaactact
gtagatttcattaaatagaacagttgaataattaaaatatatttcaaaga
tgtttttcataattatacatttttcaactcaaagtcAACACATATCActt
atatttctgatatttctcaggaaataaagaattatttgTACAGCATTCTG
CTGTTGTTTTTGCTGAAACACTAATTCTTTCTAtcactcgttgtcggaca
aaatctGTTTTGGAAAACTAATGCAACCGTCAAATGTATTGTCCGACTTT
TTTGAGGTCGGACTAGACAGTGTCGGACTTCTGAAAACTCCCCGATTTGA
TATCCTGGAAagttactttttttatataattttttaattcttatgGTCTC
TTATGTAGACTGCCTCTGACCAGACGAAAAAGGTTTTCTGTTTTaggttt
ttcgaaaattattattttgaaaggTCAAAGAGCTCagaaaaaactccaaa
tattaagaaatcgtaaaaattcaaactaaaccagaatgctcagaaaaaac
ataaaacGCCTTCGCCTCCTCAgtctttttaatgtttttttttggggggc
gggggAGCAACTGCCAATCTGACGCCATGTGACACATTAATTTACGTTTT
GTATTTCAATTGAAATCTGAAACCGCtctcctgttttttttttcacaggt
acattcttgtatttttgaaattcgTACAAGCAGTAATTCCAACGATCGAG
TATGACTATACTCGACATTTTGCTATGTAAACAACCATACACGTACGCCC
GCACCACCCACGCGCCTTCTCAAGAAGATAATATATAAATTATTCtaatg
aaattgtatttttgacaatcgtaatttttttcagcttttatttaactaaa
aataataatttttgattttcagttctttttaaaatttcatttcattcttt
cccgtctccgccctttttttaataatttgataAAACTGTCAATATATCAT
GACattttggatttattacatgttttttgatgatccattttggctaaatt
ttttcagcttttatttaactaaaaaataataatttttgattttcagttct
ttttaaaatttcatttcatgctttaccgtctccgcgcttttttttaataa
tttgatgAAACTGTCAATATATCAtgacattttgaatttattacATGATT
TTTGATGATCCAATTTGGGACTTTGGGAGGATTTTTTGCGTTCTAGAAAT
TTGAAATCGAATGACGATTCTTCAAGCGttttttcaaaggccttcttttt
cttctatttttctttttttcttttcttttttttcttttcagaaagaTTTT
CTCCAATTTAATGTATTTGATCCAAGTTCGTGAGGTATTGAAACACGATT
TCAATTTCTAAGTTTTTGAACTGATTGccagggagtttctaaacatcgac
cagaaatagcgaccagataaatttggactatcgagtttatctgctctttc
caccgtagagaatgtttaaattaagaatactaaaaagtgacctttgaagt
aaccagtcattttcttgacaaagtgatactatttgacaaaaatattgaca
gggtcattaaagggacattaaagtagtaaaatgtaaacgtgtcattaaag
agaatacaattaaaatcacgtgtccaaaaaaaacctgcaaaacaattgaa
caatcaaaattaaccatatttggtcttattttttattttgacatgtgaca
tttgttttgattttgtatccgctgcatacagtttgtttacaaatttcgca
agtactgttatgtcccattaagtatgatgtttgTAGGCTTTGTTAAaccc
aaatattttaattatgttGAATGAGaagcctttagtatgaatagatagaa
cttgtcagtaggaaaaaattgggaaggccagttttagaggtATGAATCTA
tttaattattctattgtctttatgctgacaagatgactaatttcgacaga
aataacaatcagatgatgaaatacaaagcttctcaaaccattttcaaaaa
atgttgtgccactaattattttgatgctgataatacaaaaggatagaaat
tgacaccataatcaaactccaagagcgtcgaaatggttgCGTACGTATTT
GGCAAGTGACTTTTAAATCCCCTTTAaatagatgagacaggggtgagctt
actTTTCAATATGATATAATTCAAATGATTAGGAAAGACACTCTACGTTG
GTGAAAGGGAAAAAACTCggtaacccaaatttatctggtcgctggtcgtg
gtcgccattctgatcgacgtttagaaactccctgaTTGCCAAGTCTAttt
tttttAGGACATGgacataaatttcttttttattgtcttAGACAGTCACG
AGATCTCTTTGTTAAATACTCCCGACGTGATTTTGCTACATCAAATTTTG
TCTGTTAGTCTAGTAATTACTGAGACGGGAATTCAGAACATTTCTTTAAT
TTATTTCTGAAATGCAAAACGACCACACCCAAATTTTATACTCCCCCCGT
TACGGGCAATAAGTTTCCACATGGTTTCCACGAAAGAATTTATTTGGAAA
GAAGTAAGTTCTTACcgaaaatagaaatacagtcatTAAGAACCCCCGTC
TcttaaatgtaaacaaatgaataaaagcaaaataaaggaaaaaattcgGA
AGAGACAATTCATGTCTCTTTTTCATTGTGTGACTAGACATACATTTCGA
ATGATTTTCTTTGTCGTCACACCgagaaagagaaagaagaaatatGTAAA
ATTAGCCAATCAAATGAATGGGAATTGTATTAGTCTAGTACTCAGGCTTC
AGTCCATATAAAAGCTCGTGGCAACTTTGAAAAGTAAATCAGATTATTTG
CAGCATTCAACGAAGACTACTACTTGCAAATATTCTTAAATACTCTATCG
ATATATTTTATCTACATCGTGTTGTTGAAGAATCTCATTTGTCGAACGAA
GATTATGGCAACTTCAACCCAACATCACTTGGAGCCGCTGGATCCATTCT
GGCCACCATTCGACCCTACTTTACGTAACCAACCTCATCTCCATAAACCT
CGACAGCCACCACAAACAACGGATTGTGGAACTTGCACCATTCAAAGCAG
TTTTGCTCGCATGTCGATCAGCAATTCTCAAAATCGAAACTCGGCACCAA
CCGTGATTCCACCGTCGTACTACGTTCCTGTTTACATTCCGTCCGACTAT
CAATCGAGTTCGTTCTACTCTACGCCCTCTTCGTCTCCTCCGCTACATCC
GCCCACTCTTCCAACGATTCCACCACCAAAATACTTAAACACTCCACCTG
TCTCACCACCTCGCATTAACTACAGTAAGAAACCATTATCTTCGAAAACC
GACGACTCGGAACCCGTCATCCTGACACGATCGCACGTCAATCCAGACAC
GGTCTCGGAATCGTACACCTTAGCGACTTTATTTCGGAACAAGATTTTTG
TTGGTTCGCTCAACCAAACGGTAAGAGaagcttttcatttttttgtcagt
TTAAATCTTAGCAAAATTCCACTAGGTTACGTGTCTTTTCGGTGGGatta
ttttttctgaaacagCATTAATAAATTTGTGTTGACAAGAAAGCCTCGAA
AGCCTAAGTGTTTCACTTTGGAAAGTATTTCAGCTTCAGCCCTACACTCT
AGTTTCAAATTGACAGTTTTTCATTTCGCATGAAATTCAGAAAAAGTAAG
TGACTTTCAACAACTCTTCGCCCTAACTTaattatttcatatttcatatC
TTGACATTgttttatcactttttttctACAGATCACAGCAGGAGATTTGG
TGGACTTCTTTCAAAAGTTTGGAGTGGTTACCGAAGCCAAAGTCGTGATG
GATGACAAAGGCAGCTCTAGAGGGTAA Coding sequence (CDS) from alignment at sc0000269_pilon:278329..282455+ >XLOC_020052 ID=XLOC_020052|Name=XLOC_020052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1578bp|location=Sequence derived from alignment at sc0000269_pilon:278329..282455+ (Clytia hemisphaerica_ch_hm2_pilon)
agaCACGCGGAGGTAATGAAGAAGATTATTTCCACAGTCCAAGATGGCGG
CGGTGATATTGGTGTTCATATGtgagagaCACGCGGAGGTAATGAAGAAG
ATTATTTCCACAGTCCAAGATGGCGGCGGTGATATTGGTGTTCATATGtg
agCATTCAACGAAGACTACTACTTGCAAATATTCTTAAATACTCTATCGA
TATATTTTATCTACATCGTGTTGTTGAAGAATCTCATTTGTCGAACGAAG
ATTATGGCAACTTCAACCCAACATCACTTGGAGCCGCTGGATCCATTCTG
GCCACCATTCGACCCTACTTTACGTAACCAACCTCATCTCCATAAACCTC
GACAGCCACCACAAACAACGGATTGTGGAACTTGCACCATTCAAAGCAGT
TTTGCTCGCATGTCGATCAGCAATTCTCAAAATCGAAACTCGGCACCAAC
CGTGATTCCACCGTCGTACTACGTTCCTGTTTACATTCCGTCCGACTATC
AATCGAGTTCGTTCTACTCTACGCCCTCTTCGTCTCCTCCGCTACATCCG
CCCACTCTTCCAACGATTCCACCACCAAAATACTTAAACACTCCACCTGT
CTCACCACCTCGCATTAACTACAGTAAGAAACCATTATCTTCGAAAACCG
ACGACTCGGAACCCGTCATCCTGACACGATCGCACGTCAATCCAGACACG
GTCTCGGAATCGTACACCTTAGCGACTTTATTTCGGAACAAGATTTTTGT
TGGTTCGCTCAACCAAACGCATTCAACGAAGACTACTACTTGCAAATATT
CTTAAATACTCTATCGATATATTTTATCTACATCGTGTTGTTGAAGAATC
TCATTTGTCGAACGAAGATTATGGCAACTTCAACCCAACATCACTTGGAG
CCGCTGGATCCATTCTGGCCACCATTCGACCCTACTTTACGTAACCAACC
TCATCTCCATAAACCTCGACAGCCACCACAAACAACGGATTGTGGAACTT
GCACCATTCAAAGCAGTTTTGCTCGCATGTCGATCAGCAATTCTCAAAAT
CGAAACTCGGCACCAACCGTGATTCCACCGTCGTACTACGTTCCTGTTTA
CATTCCGTCCGACTATCAATCGAGTTCGTTCTACTCTACGCCCTCTTCGT
CTCCTCCGCTACATCCGCCCACTCTTCCAACGATTCCACCACCAAAATAC
TTAAACACTCCACCTGTCTCACCACCTCGCATTAACTACAGTAAGAAACC
ATTATCTTCGAAAACCGACGACTCGGAACCCGTCATCCTGACACGATCGC
ACGTCAATCCAGACACGGTCTCGGAATCGTACACCTTAGCGACTTTATTT
CGGAACAAGATTTTTGTTGGTTCGCTCAACCAAACGATCACAGCAGGAGA
TTTGGTGGACTTCTTTCAAAAGTTTGGAGTGGTTACCGAAGCCAAAGTCG
TGATGGATGACAAAGGCAGCTCTAGAGGGTAAATCACAGCAGGAGATTTG
GTGGACTTCTTTCAAAAGTTTGGAGTGGTTACCGAAGCCAAAGTCGTGAT
GGATGACAAAGGCAGCTCTAGAGGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269_pilon | genome | sc0000269_pilon:278329..282455 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-813:4032 |
| Aaloc | 103-717:3106 |
| Aaloc | 25-99:1 |
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