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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000352_pilon:132786..134257- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019982 ID=XLOC_019982|Name=XLOC_019982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1472bp|location=Sequence derived from alignment at sc0000352_pilon:132786..134257- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACCCTTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAAGT
GGTCATACCTTTCCACATGAAACAGTTCAAAAAGATAATTGAAAAGTGTT
CTGAAAGCCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCTGT
ATTCGATTCATCACAACTTTGCTTTTCCTCCGAGTTAAATGCTCAAGACC
TATGACGTACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAATA
ATGGTGGATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGGTATGAT
TATGGTTCTAAAGAATTTGTATTAGATTAAGACAAAGTCTACCCTTTCTG
CTTGATATCCTAATTTTAAGAAACGATGATTTTTGATCTAATAAATGATA
CCATACATTTTATATCACTTACTGTATCTTTAAATCAAAGTTTAATTCTC
ATTTAAATCACATCTATCATATGATAATTATTATTTTGTTATGATATTTA
AACTGTTTTATTAATAGTATAATATAATAACAATGCATGTTTATTGTTTT
AAGGTATATCTTCGACACTTTGATATTATCAGACGATACGATAGAGATTA
TTGATTTGTACTTAGAGTACATCCGACCTCGTCTCAATCCACAATGCGAC
TTCCTTCTACTCTCAACAAATGGAACTCAATTTCAATCCTTGACTTCAGC
TATGACGATCCTCGTTCATGAAGCCATTGGCAAGCACATCAACCCAACTC
GTTATAGGCAAATAGTCGAAACGGAAAGCAGCGAAAGGCTTAACTTGGAA
GAGCAACATTATATCACCGAAGATCAAAAGCACAGCTCTACTGTAGCTAA
AATACACTACAAGAAGACTCAATCGAGGATCGTTGCAGTAGAGGGACGTA
AATGTATGGAAAAGATGACAAAGGACGCAAGGTCTGACGGCAACAAAAAC
CTTGTTGAAATGTTTAATAATATATCTTGTTCTTTCGATAACGACGTATT
GAGTCATAGTCGACGCATAATAGAAGGTATGAAACCTAACGCTCAAAATT
CGATTTCGAGTGCTTCTTGCTCATCAAGCCATATGGAAGTTGATACCGAT
CCATACCAACCAGTGAGTGAATCACTAAACGAATCGACAGATATGGTCAT
CACAGAAACTTTTCCTACTAATAACACTCCAGCCGTGGCTGATGTACAGG
AAGTCAGCATCTTAAATATACCAAATGACAATATTGTTATCAAAAAGGAG
GCTGCTCGACAACAAACTAACAGAAAACAACCTAAAAATGTGAAATTCAC
TAGTGCAGAAGATCATTGTTTAAAGCAGGGCATCGAAAAATACGGTCGTA
AATCATGGGCTATAATTTTGAAAGACCCTAACTTAAAGTTTCATGAAACT
AGAAGTAGAGATTCTTTGAGGGTTAGAGCTGATAGTGCTTGCTTTAGAAA
GCTTTTTAATGATAATAAATAA Coding sequence (CDS) from alignment at sc0000352_pilon:132786..134257- >XLOC_019982 ID=XLOC_019982|Name=XLOC_019982|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2424bp|location=Sequence derived from alignment at sc0000352_pilon:132786..134257- (Clytia hemisphaerica_ch_hm2_pilon)
GAAACCCTTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAAGT
GGTCATACCTTTCCACATGAAACAGTTCAAAAAGATAATTGAAAAGTGTT
CTGAAAGCCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCTGT
ATTCGATTCATCACAACTTTGCTTTTCCTCCGAGTTAAATGCTCAAGACC
TATGACGTACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAATA
ATGGTGGATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGGAAACCC
TTATCGCCAGAAACAGCTGGGCAACGTTGGAGGAAATGGAAGTGGTCATA
CCTTTCCACATGAAACAGTTCAAAAAGATAATTGAAAAGTGTTCTGAAAG
CCACGAAGCAAGATTTCTAACGAAAGGTGAATTGGTCTTCTGTATTCGAT
TCATCACAACTTTGCTTTTCCTCCGAGTTAAATGCTCAAGACCTATGACG
TACCAGTTTCTCACGGTTGAAATGGTTAACAAAGCAAGAAATAATGGTGG
ATTTGTCGATCAAAGAGAGTTCAAAACAGCATCAAGGTATATCTTCGACA
CTTTGATATTATCAGACGATACGATAGAGATTATTGATTTGTACTTAGAG
TACATCCGACCTCGTCTCAATCCACAATGCGACTTCCTTCTACTCTCAAC
AAATGGAACTCAATTTCAATCCTTGACTTCAGCTATGACGATCCTCGTTC
ATGAAGCCATTGGCAAGCACATCAACCCAACTCGTTATAGGCAAATAGTC
GAAACGGAAAGCAGCGAAAGGCTTAACTTGGAAGAGCAACATTATATCAC
CGAAGATCAAAAGCACAGCTCTACTGTAGCTAAAATACACTACAAGAAGA
CTCAATCGAGGATCGTTGCAGTAGAGGGACGTAAATGTATGGAAAAGATG
ACAAAGGACGCAAGGTCTGACGGCAACAAAAACCTTGTTGAAATGTTTAA
TAATATATCTTGTTCTTTCGATAACGACGTATTGAGTCATAGTCGACGCA
TAATAGAAGGTATGAAACCTAACGCTCAAAATTCGATTTCGAGTGCTTCT
TGCTCATCAAGCCATATGGAAGTTGATACCGATCCATACCAACCAGTGAG
TGAATCACTAAACGAATCGACAGATATGGTCATCACAGAAACTTTTCCTA
CTAATAACACTCCAGCCGTGGCTGATGTACAGGAAGTCAGCATCTTAAAT
ATACCAAATGACAATATTGTTATCAAAAAGGAGGCTGCTCGACAACAAAC
TAACAGAAAACAACCTAAAAATGTGAAATTCACTAGTGCAGAAGATCATT
GTTTAAAGCAGGGCATCGAAAAATACGGTCGTAAATCATGGGCTATAATT
TTGAAAGACCCTAACTTAAAGTTTCATGAAACTAGAAGTAGAGATTCTTT
GAGGGTTAGAGCTGATAGTGCTTGCTTTAGAAAGCTTTTTAATGATAATA
AATAAGTATATCTTCGACACTTTGATATTATCAGACGATACGATAGAGAT
TATTGATTTGTACTTAGAGTACATCCGACCTCGTCTCAATCCACAATGCG
ACTTCCTTCTACTCTCAACAAATGGAACTCAATTTCAATCCTTGACTTCA
GCTATGACGATCCTCGTTCATGAAGCCATTGGCAAGCACATCAACCCAAC
TCGTTATAGGCAAATAGTCGAAACGGAAAGCAGCGAAAGGCTTAACTTGG
AAGAGCAACATTATATCACCGAAGATCAAAAGCACAGCTCTACTGTAGCT
AAAATACACTACAAGAAGACTCAATCGAGGATCGTTGCAGTAGAGGGACG
TAAATGTATGGAAAAGATGACAAAGGACGCAAGGTCTGACGGCAACAAAA
ACCTTGTTGAAATGTTTAATAATATATCTTGTTCTTTCGATAACGACGTA
TTGAGTCATAGTCGACGCATAATAGAAGGTATGAAACCTAACGCTCAAAA
TTCGATTTCGAGTGCTTCTTGCTCATCAAGCCATATGGAAGTTGATACCG
ATCCATACCAACCAGTGAGTGAATCACTAAACGAATCGACAGATATGGTC
ATCACAGAAACTTTTCCTACTAATAACACTCCAGCCGTGGCTGATGTACA
GGAAGTCAGCATCTTAAATATACCAAATGACAATATTGTTATCAAAAAGG
AGGCTGCTCGACAACAAACTAACAGAAAACAACCTAAAAATGTGAAATTC
ACTAGTGCAGAAGATCATTGTTTAAAGCAGGGCATCGAAAAATACGGTCG
TAAATCATGGGCTATAATTTTGAAAGACCCTAACTTAAAGTTTCATGAAA
CTAGAAGTAGAGATTCTTTGAGGGTTAGAGCTGATAGTGCTTGCTTTAGA
AAGCTTTTTAATGATAATAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000352_pilon | genome | sc0000352_pilon:132786..134257 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-1197:376 |
| Aaloc | 754-822:448 |
| Aaloc | 670-753:535 |
| Aaloc | 292-669:919 |
| Aaloc | 103-288:1368 |
| Aaloc | 1-102:1473 |
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