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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000634_pilon:6363..9711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019960 ID=XLOC_019960|Name=XLOC_019960|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3349bp|location=Sequence derived from alignment at sc0000634_pilon:6363..9711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTGGAGGAGACGCTAAGTCAATCATCAGACCAACAACAAGACCA
ACAACCAGGAAAGCGACATGGTAGTCACGGGTCGTTTAAAAAAAGCGTAA
GTGTATTTTTTATTTGTATAGGTACCTAAGTTGTAGCTGTATAATTCTAT
AATTGTAACAAGTTATTTAACAACTTTGATTCTAGGTTGATATTCTGTAA
AAATGCTTGGTCAATTATTTACATTCCTTTTCTATCATAATTTTAGGATA
AGTACATAACCGATCCTGCCTCTCGCAAAAACAAAGAAAAAGCGAAAATA
GCATCAATTCGAAGAAATGTAAGTTAAATCTTGGCATATATGAAAGGAAA
CAGTATATGATTCCAATTTGTTGTTGTAAAACCAATTTCTTTGATTTTAT
AACTACAAAATGACTCCTCTAATGAACATCATTTTATTTGGTAAGCATTG
GCAGATTTAACTCTTGATCGAGACTTCATTTTCTGCTCTCTGTAGAAGAT
ATTTTGAATCGTTGGAAAAGTAAAAGAAAATATTATAATATTCTGCATAA
TGCATTTTTTTGCTCTATTTTAAGATACGCGACGCGGCTGTATTAACCAA
GATGCCGAGTGCATTTTTTGCCTTCTCTGAAGGTAAAGTAGAAGTAATTG
GTAAGTACCAAGCAGATTACCTACAATCTTAGTGTTTAAAACAACTGATC
TGAAGTGACACTAATCACAAAAAGACCATTATAAAAAAAGAATCAAAAAG
ACTGTTTCAGACGTACTTTATAATAATACATTTCACTCTTCTCAGGCTCA
ACAAAAGCAATGAAAGAGTTTTTGAACGACGAATCTATTAAACGTCGCTT
TCTTGAATGTGCGAAAGCTAATCCGGAAGTGGAGTCGTCAGATGATGAAG
AACCAATAGCTGAAAGTAGTCCAAGTAAAATTTCCTACTTTCCTCCGATT
TTCGACATTCTACTAGTGTTGATTATTATTTTTCTACACATTAAACAAAC
AAACTAATTCTATGATGAAAATTTAAGCTATTTCTTTAAGCTCAAATTGT
AAAATTAAATGTTATGTCGAAAAGACATAATTAGAGTTTCAAGAATTAAT
TCACACCGTGCTTTCCGAAGTGTGAAATTGAATCTGAATTGCCATCCCCT
ATCCTTATTTTTACTTATTTTGTTCATAGGCAGTAAGCAAGAAAGTGCAA
CATATCCCTTGGAGGAAGGATGGAATACTGGCAACGTCCATAAAAAAAGG
AAAGTCATCCGAGATATCGTGGTTTGGGATTCAGGTACATGATTTTCAGT
ACGGCTTTTAATTATCATTGCAAAGAAGTCTTTCTAAGAATGAACAAAAT
ATAAAGAGGATGGGTCAGTTATTTTCAACCTATGAGTATTCCTGTTTAGT
TTTTCAAATCTAAGAATTTCCGTAAAAATTAACTCTTTTTAAATCTATTT
TATTGTTTGTACAAACTTTCGAATTAAGTATCTTTTCGTCTTGAACAAAA
CTTTTTATTGTTTTTCTAATTTCTGTTCAGGTTTGGGGGACGCTTTCAAA
TGGGACAAGGAAAGAACACCATTCTGGTGGCCGTCTAACCTTACATTCGG
TAACATGAAAAGTGTGAATGTTGCATCTTGCGATCGAATACTCGATGCTT
ACCGAAAGATGTTGATAAAGTCGAGGATTGTGAGTTTTTTTCTATTATGG
CTGTCATAAACCCGTCTTTTATTTTATTTATTTAATTATGATATAGGCAC
TTCTGTCCAATTTTGGACTGAAAATATCGGTATGGACCTCAGCGGACCCA
ACTTTCACGCACTCATGCAAGAAAATGCTAGTAACATAAACCCAATGATA
ATACAGTATGGTCAATTATCTGTATCTTATCTGATCTTATCTGTATGTAG
CAATGACAATGATGCGTTACTCTGTCAGATATTCGACTTTTTAACTAAAT
TTTGGATTTAGAATCAAATTACAGAGATGCCTAATCAACCCTGGTTAGAA
CTGAAGAAATGGGCAGATACGACCGTTGAAGAAGTTGATTTGGTGGTAGA
TTGGGTAAAATGTGACTGGCAGGAACCCACGATCAACAAAAGATTTGTTT
CGCGCAGGTTTGTTGCTTAGTTTCCGTTTAAGTAGGTTTATTTCATGTCA
TTTTTGGAACGAATACGTAGTAGTTGCGATTAGTATTGAATACCAACCGT
ACAACTATTTTACGAAACAATACCTTTGATACAAGGATAAAAACCTAAAA
TCTAAACAGCCAATCATTAACTTTAAAGAATAAGTTAAATTCATTTCCTT
TCTACTTTTATTCAGATTTAGATCTGTCACATCGGACTGGATTGCATCGT
CCGAAAGAGAACCTTTTTGGTGGCCAAATCTAACGAAATCTCTTTCTTTT
GCTGTTTTCGCCACATCAAAAGAAGAAAAATTCATTAAAAATCTTGCACT
TGCTGCATGCATTAAAGATTTTTCAGCTCTTTTAAACTTTGTAAGTTTTG
TTGGGATATTTGCTTTTTTTCTCACTACTTCTGTAAGTAAGTTTGCGACC
GCAGTCGAGGGCGACCTGAAGGCTCTCTTTTCTCTAACTGTCTACCGAAG
GTAGGGGAGCGGGCGCCACTCTTTTTCCTGGATCTCTCCACTTACCCTTG
ATCCGTCTCTTTAGTTCCTGATAATTAAGCAGAGAGGCATCAAGTACCGA
GAATCTTCGGTACAACCCGGCTGGGGATCGAATCCACATCCTTGCGCACC
GTAGCTGGATGCTCTAACTTAATGCCACGGTAGCCATTTTCTGTAAAGCA
CTTTTATGTCAAAAGATACTTATCAGTTTAAAACACTTTATTTTAGTTTT
TATTTCGTAATTTTAGGTTCGAGAAGGTACTGATTCTATAGATGCAAGCC
AAATCAAAACCTGGCTGAATGTTGATGGTGATTTTAACACGGAGGCCTAC
ATCGTTAAGGACCATTTAATGAATATATCCAGTGCTAGTGGTAATTATTA
TTGTCTTATTCTAAAGTGCAATGAATTTTTGTATTTAACTTGCTACCTTA
CCATAAATGTTACCAATAATTCTTAGATGTATTACTAAATTAGTAAAAGG
TTTAATATGTCTCCTGACGATGATCTGGAAATTTACCGGGGTTTAAAAGC
AATAACTAAAAACCATATTCAAGATTCTTTAAAAAAAAAGAGAGCTCAAA
CTTTAGGGAGGAAGATAAAAAAAGAAGGCAACAAAGCTCAAGGGAGAACC
AAAATCTAAGGCGTTAACATGTTATTTCATATTGATATATATTGATGTTT
TACTCTTTCTTCCTTTAAAGGACTGACGGAACTGTTTGCCGACGAATAG Coding sequence (CDS) from alignment at sc0000634_pilon:6363..9711- >XLOC_019960 ID=XLOC_019960|Name=XLOC_019960|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2202bp|location=Sequence derived from alignment at sc0000634_pilon:6363..9711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGTGGAGGAGACGCTAAGTCAATCATCAGACCAACAACAAGACCA
ACAACCAGGAAAGCGACATGGTAGTCACGGGTCGTTTAAAAAAAGCATGG
AAGTGGAGGAGACGCTAAGTCAATCATCAGACCAACAACAAGACCAACAA
CCAGGAAAGCGACATGGTAGTCACGGGTCGTTTAAAAAAAGCGATAAGTA
CATAACCGATCCTGCCTCTCGCAAAAACAAAGAAAAAGCGAAAATAGCAT
CAATTCGAAGAAATGATAAGTACATAACCGATCCTGCCTCTCGCAAAAAC
AAAGAAAAAGCGAAAATAGCATCAATTCGAAGAAATATACGCGACGCGGC
TGTATTAACCAAGATGCCGAGTGCATTTTTTGCCTTCTCTGAAGGTAAAG
TAGAAGTAATTGATACGCGACGCGGCTGTATTAACCAAGATGCCGAGTGC
ATTTTTTGCCTTCTCTGAAGGTAAAGTAGAAGTAATTGGCTCAACAAAAG
CAATGAAAGAGTTTTTGAACGACGAATCTATTAAACGTCGCTTTCTTGAA
TGTGCGAAAGCTAATCCGGAAGTGGAGTCGTCAGATGATGAAGAACCAAT
AGCTGAAAGTAGTCCAAGCTCAACAAAAGCAATGAAAGAGTTTTTGAACG
ACGAATCTATTAAACGTCGCTTTCTTGAATGTGCGAAAGCTAATCCGGAA
GTGGAGTCGTCAGATGATGAAGAACCAATAGCTGAAAGTAGTCCAAGCAG
TAAGCAAGAAAGTGCAACATATCCCTTGGAGGAAGGATGGAATACTGGCA
ACGTCCATAAAAAAAGGAAAGTCATCCGAGATATCGTGGTTTGGGATTCA
GGCAGTAAGCAAGAAAGTGCAACATATCCCTTGGAGGAAGGATGGAATAC
TGGCAACGTCCATAAAAAAAGGAAAGTCATCCGAGATATCGTGGTTTGGG
ATTCAGGTTTGGGGGACGCTTTCAAATGGGACAAGGAAAGAACACCATTC
TGGTGGCCGTCTAACCTTACATTCGGTAACATGAAAAGTGTGAATGTTGC
ATCTTGCGATCGAATACTCGATGCTTACCGAAAGATGTTGATAAAGTCGA
GGATTGTTTGGGGGACGCTTTCAAATGGGACAAGGAAAGAACACCATTCT
GGTGGCCGTCTAACCTTACATTCGGTAACATGAAAAGTGTGAATGTTGCA
TCTTGCGATCGAATACTCGATGCTTACCGAAAGATGTTGATAAAGTCGAG
GATTAATCAAATTACAGAGATGCCTAATCAACCCTGGTTAGAACTGAAGA
AATGGGCAGATACGACCGTTGAAGAAGTTGATTTGGTGGTAGATTGGGTA
AAATGTGACTGGCAGGAACCCACGATCAACAAAAGATTTGTTTCGCGCAG
AATCAAATTACAGAGATGCCTAATCAACCCTGGTTAGAACTGAAGAAATG
GGCAGATACGACCGTTGAAGAAGTTGATTTGGTGGTAGATTGGGTAAAAT
GTGACTGGCAGGAACCCACGATCAACAAAAGATTTGTTTCGCGCAGATTT
AGATCTGTCACATCGGACTGGATTGCATCGTCCGAAAGAGAACCTTTTTG
GTGGCCAAATCTAACGAAATCTCTTTCTTTTGCTGTTTTCGCCACATCAA
AAGAAGAAAAATTCATTAAAAATCTTGCACTTGCTGCATGCATTAAAGAT
TTTTCAGCTCTTTTAAACTTTATTTAGATCTGTCACATCGGACTGGATTG
CATCGTCCGAAAGAGAACCTTTTTGGTGGCCAAATCTAACGAAATCTCTT
TCTTTTGCTGTTTTCGCCACATCAAAAGAAGAAAAATTCATTAAAAATCT
TGCACTTGCTGCATGCATTAAAGATTTTTCAGCTCTTTTAAACTTTGTTC
GAGAAGGTACTGATTCTATAGATGCAAGCCAAATCAAAACCTGGCTGAAT
GTTGATGGTGATTTTAACACGGAGGCCTACATCGTTAAGGACCATTTAAT
GAATATATCCAGTGCTAGTGGTTCGAGAAGGTACTGATTCTATAGATGCA
AGCCAAATCAAAACCTGGCTGAATGTTGATGGTGATTTTAACACGGAGGC
CTACATCGTTAAGGACCATTTAATGAATATATCCAGTGCTAGTGGACTGA
CGGAACTGTTTGCCGACGAATAGGACTGACGGAACTGTTTGCCGACGAAT
AG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000634_pilon | genome | sc0000634_pilon:6363..9711 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1075-1101:28 |
| Aaloc | 949-1071:484 |
| Aaloc | 775-948:1034 |
| Aaloc | 628-771:1389 |
| Aaloc | 481-627:1818 |
| Aaloc | 376-477:2169 |
| Aaloc | 247-372:2553 |
| Aaloc | 169-243:2776 |
| Aaloc | 97-168:3104 |
| Aaloc | 1-96:3350 |
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