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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000452_pilon:136328..141460+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019947 ID=XLOC_019947|Name=XLOC_019947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5133bp|location=Sequence derived from alignment at sc0000452_pilon:136328..141460+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAACTTCAACCCACTTCAATCATTGAACAATCATTTCACTGGAGC
AGATAAGGCAGATATGGTATGTGATGCCCCTTGTTGTTCACATCGAGCTA
GTAAGAATAGCTTTATATGTAAACTAGACTAGTTACTTAATACAAGTAGG
ATAACAGGCGTTTAACAACTTTCTCGAATTTTACTAGAGATgtagaaaat
aaattcatttcgAACACATCCACCTGTGGATAGGGATATAGTTACAGACA
TTGCCCCCtaaaatttgacgaaatttcaaagtcaatatTTATTTATGGGT
TTTATAATATAAAACCCAAAGCCACTTATACCAATCGAAATCAAATGAAC
acaccttcgcccgggtcaaccaatacaatgtgaggggaattgggtaccac
tacTATGATACGAGAGTGTGGGTGATATGCCAGACATTATGGTGTGTGGT
CTGTAACGAGCTATATGGTCTCCAGCGTGGTTCGAGTGTCATCactatgc
atcatggtatcAGTGTCTTACGTGCACAGAACCAGAGGTTCTGAGCGTTC
CGACTTGAAAAAAGAGGAATTCCTAATTCGCAAGTAGTAGGGCCATCCCA
TCCCCTAatggggagggctcatatcatcgTCTTTGAAAGCTTTCGATTGG
TATAAGTGTTTTCGGGTTTTATTGTCTTTGGAATTTCGTCAAATTCTAGG
GGTTTAGGGGTTTTGCCTTTGACGTCAATTTATGAGTCCTAAAACATTTT
CTTAGGCCTTAACCAAAAACCCCTCTCGCGAAAAACTCTGTAAATACTTC
AGTCTTTAAAATGGACCAGGCTTGGTTTGTGTAAATGTTTACTAAAATAG
CTACCACTTCTCTAAATTTGGTTGGTGTTATACACAAGATTCTacaaaat
ccttttagtacttgTATATGTCTAAAATTCTTTTAGTGAGTCCTCCCCTT
AAATTGGAATCGGGCTACCTTCCTATGTACTTATCATTGTCTTCATTGTT
TTACACATAGCCAGTGCTTGAAGAAAACGGGAGACTGGATGAAGAGAAAA
AGATTATTCACCAGTGCACCATCAAGTATGATGGGAAGACACATGGCCCC
TTCGAAGCGCCCACCAAAATGGAAGCCAAACACGCAGCGGCTGCGTTCGT
GTGCGATCTGTTGAAGCTCTACCATACTGGTGTTCCtgtcaaagaaaaaa
gtaaaatcttttaGAGATTACATAATATATACGTAAGATAAATTTCGGCC
ACACTGTTATTATAGCTGGTCATATACTTGGCAGACTGGAAGTCAGAGTT
ACATTATACAGTGTAATCTCCATAACAACGCCACCTTGCTCATTTCATGT
TAATAATAAGTTTTTCCATCCAGTCTAACCCTTTATCTTTAGCTTGGGGG
GTTTTGAACCTAGTCTAGACATAGAGTTAGTAATGTTTAGGACTGGTCTT
ATTATGAATCTGTTTTCCACCAAGTAGAAGTAAAGCAACCATCTTTCTTT
CATCTATCGGTCGgacaaaacattaaaaagaacCGAATATCCAGGGGTAC
ATATCTAAATATTTCCCATGAACCAATCAATTTCCtcgacaccccccccc
ccccacacacacacacacacaattGTTTTCTTGAATGGCCTATTGAATAT
CACAATATTCTCTTTTCCAATTCCAGAAAAGCCAGCAAGTAATTCTGAAA
AGAATTGCATTGCGTTATTGCACGAGTTTTGTCAACGAGAAGGCTGGACG
CAACCTTTCGACTCCGTTGTTGAGGAGTGCGGTGTTGTGCATGAACGCAT
ATTCAAAATGAGGTGCATTTCGTCATTAAACTGTTTTACTTATCAgtaat
ttttaagaattgtCACATCAAAAACTGTCAAAGATGCCTAATCGTTTTGT
CCTTTTATGAAATTAGATTTAAACGTCATAAAGCAGGACATGACCTTTCA
GTTTAACACGAAACAAAAAATCGGCTTTTCAGGTACAGTTTGGCAGGTTT
CAACTTTCCTTGTGGAATTggtgaaaataaagatgtaGCAAGGAGGAGGG
CGGCTGGTCAAGCACTGGCTATCATGAAAAATATGGACGTTCGAGGTATT
CATATCATTTTATGTATGATTGTGATTGGCACTTTTTGACAACATGAAAA
GACGCTGCGACCGGAGGGGCCAGAAGGTTCCTCTTTGGAAAGCTACCTAG
GGGTAGGGAAAGACGCCACTCTTTCACTATGGATTGCATAATACTTAGCT
ATGATCCTGTTCGGCCTTTATAATGCGAATCGCTTTGCAACATAtaggcc
cggggggggtactagggttgcgagctgacggggggggtgccgcccgactt
tcgaactttggacccttaccgggactaaaaaggagaaaacaaaggaaaat
tttgggaattttacgacccttagcgggacaaatttgaccaattttgacca
aatttcgatctttcagggggtagacagttgaaattttcttatttttccga
cccttagtgggactgagatttgattttctgatttttccgacccttagcgg
gacttttgaagtcccaaaaaggtacccttaagggcggcacataccgtacc
cttcatttgcctaagtaccccccccccccgggcacatAGGGGATACATGT
TGTACGAAATTCTAATCTTATCAAGTTTGTTTGTCAGAAAGGCCGACCCT
TCACACAACCAACAACTCAATCTCTAAAAGAAAGTTTATCGATAATTCTT
CAGGTTTCGACAAAACATGAGGGTTTGAAAATGAATCGAACCGAAAACTA
AATCGAGTTAATCTTAGTTAAAATTTTCCGAACATTAAAAGGCTTTAGAA
GTTTTGGGCATTATTTTAACTaggtttatttttttcttactttagAATGC
TATCGTGGACCCGATCCGAATAAACCGTTTGGTCCACAGATTGCAGCGTT
TTCTTGGGAGGCTTTCGGAATTTTTTGTAAgtgttaatttcaaaattttc
actcGCCACGCTCCACCGCTCCACGGAGATGGTAATTCTACTCAGATACT
ttaagattcttttttttttcaacgaaaaaaCACCTCTAAAAGATTATTTT
ATTGTAGCCTCCATATGTTTGAAAAACTTATCTGAATGTAAGTAGTTTAC
CGTAGATGAAGCCAAGTTTGTCTAAAATCTCTTTACTTTTTCAGGTGAAG
AGATAGCAAAAGATGTTTCACTTTTTGCTGACCCTCGAACGTGCAAATCG
TTCAACCTCTGTGCTTTTCTGCTggaaaacatcaaaaatggAGAATTGCG
AGTGGTCGGAATGGGCACTGGTAAAAGGTACTTGaaaaaaaCGTGTGGGT
AAAAACTTTGTCAATTGGTGAAACTCTCAATTTTCAAGTTTGTACTAGCT
AATTCTTTTCTGTGATGGTACATTTATATTTGTGTTGCTTACCCATTCTT
TCAGCACAGCTAAGAAAAGTCATCGAGTATCAGACGGAGAAACGGTCATC
AATTCCCACGCAGTGGTCATCGCGCGTCGTTCTTTGCTGGTCTTCCTGTA
CAGACAACTTGTGCGGCTTTTCGAAGGACGTTTCTCTATTTTCGAATACC
ATGATAGAGAAGATGTGAAGATAGCACGCCTTCGACTGCATTACAAAATC
CACCTCTATACGAAAAACCCGCCTTGTGGTGACGCTTCAAACGTTTCAcc
acactcaaaacatgcaagTGATCATGAGTAAGTTCATCATAATATCCTAC
TTCGCAAGCGAAACCCGTTTGTTTTATTCTGTTTTCCAATTTGATTTCCT
CCCTTTAAACTTTATTATTCGTTGTGTCCAGCCCCAAGGAAGCGACGAAT
GAATTCTGAGATGCTTGAATTTAGAGTGGATTTAATAGTCTCGGTTGACG
AGTCAAGGCAAATCAGTAGCGTAGatataaaaaagataattacagtTTCA
TACAAATCTACTCTCATACAAAAATTTTGCGCCCCGCCTGTCTACGCTAC
TACAGATGAATGATACCAACTTCTTCTTTTAGAGTTCGGAATGACCACCA
GACGTATTGGTGCAAGAAGGACTCGATCAAAGGAGAAGGCCAGGTGCTCA
ACGCAAAGTCAACTGCTGACATCGCATCTTGCTCTGATAAAATTCTCCTC
TGGAACTTCGTTGGTATGTAATTATTGAGTTGTCCAATGAACTTCTTGTT
CGAgagaaacaaaaaatctttatcgCACTTTTCGTTATTTGTTCACAATA
TACATCAAATCATTGGAGCAGAATTCATTTAAACCAAAAACAAGGAGCTT
AATGTGGTCtaattctttaaaatttgttaAGAATGTCTTTCGATTCTCAA
GGTAGTTTAATTAAGTCTATGAGTATCTTTGGACATGATCAACAGGGTGA
TCAATTTTTTTTACTCAGGACTTCAAGGCGCATTATTGGACACTTTGATC
GAACCCATCTTCATGGATTCCATTACAATCACCAATGATTACGTACCACG
TGACTTAGTACGCGCTTTTTGTTGCCGACTGTCCGCCGATCGACTCATTC
AACACCCATGGATGCAAGTGGGAGAGGTACGAGGTGTCCAATCTACATCT
GCATATCACCAACCTAACGTCAGTGCCTATTGGACACATAATGATCTAGG
TACATATTTTTCATGAGAGCAAAGCTAGAAAAGATCTGAGCCTGAGGATT
GACGGTGGGCGGGGACGTGTTGCTGGAGTCCCTGGAGACCCTGTCAAAAA
CCAATTTTTTTAaatctttgaatctgaacttttttctttttttttcagag
ttGCAGGAGGAATTATTGAACATGCCAGCCAACGGAGGTGTTTTGTTCGC
CATGGTGGGTGGCCATTACAAAGGCTCTGCTCGTGATGGGGAAATACCCA
TGATATGTAAACGGTTCCTTTTCATGCTCTACCAGCAAGTCACCACGTTC
CTCGATGAGAAGAGCACCGTCTTCAGCaaaaaaaCTTATAAACAAATCAA
AGATATCAATGTCGAGTAtcgaaaaaagaagaatttgttttttaagatGG
TCACTGAACAGAACTTAGGGAATTACCCTAAACTATTGGATGACGTAGAT
GAGTTTTACTTGGATGATAACGTCGAACAGTAG Coding sequence (CDS) from alignment at sc0000452_pilon:136328..141460+ >XLOC_019947 ID=XLOC_019947|Name=XLOC_019947|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2880bp|location=Sequence derived from alignment at sc0000452_pilon:136328..141460+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAACTTCAACCCACTTCAATCATTGAACAATCATTTCACTGGAGC
AGATAAGGCAGATATGATGGATAACTTCAACCCACTTCAATCATTGAACA
ATCATTTCACTGGAGCAGATAAGGCAGATATGCCAGTGCTTGAAGAAAAC
GGGAGACTGGATGAAGAGAAAAAGATTATTCACCAGTGCACCATCAAGTA
TGATGGGAAGACACATGGCCCCTTCGAAGCGCCCACCAAAATGGAAGCCA
AACACGCAGCGGCTGCGTTCGTGTGCGATCTGTTGAAGCTCTACCATACT
GGTGTTCCtgtcaaagaaaaaaCCAGTGCTTGAAGAAAACGGGAGACTGG
ATGAAGAGAAAAAGATTATTCACCAGTGCACCATCAAGTATGATGGGAAG
ACACATGGCCCCTTCGAAGCGCCCACCAAAATGGAAGCCAAACACGCAGC
GGCTGCGTTCGTGTGCGATCTGTTGAAGCTCTACCATACTGGTGTTCCtg
tcaaagaaaaaaAATGCTATCGTGGACCCGATCCGAATAAACCGTTTGGT
CCACAGATTGCAGCGTTTTCTTGGGAGGCTTTCGGAATTTTTTAATGCTA
TCGTGGACCCGATCCGAATAAACCGTTTGGTCCACAGATTGCAGCGTTTT
CTTGGGAGGCTTTCGGAATTTTTTGTGAAGAGATAGCAAAAGATGTTTCA
CTTTTTGCTGACCCTCGAACGTGCAAATCGTTCAACCTCTGTGCTTTTCT
GCTggaaaacatcaaaaatggAGAATTGCGAGTGGTCGGAATGGGCACTG
GTAAAAGGTGAAGAGATAGCAAAAGATGTTTCACTTTTTGCTGACCCTCG
AACGTGCAAATCGTTCAACCTCTGTGCTTTTCTGCTggaaaacatcaaaa
atggAGAATTGCGAGTGGTCGGAATGGGCACTGGTAAAAGCACAGCTAAG
AAAAGTCATCGAGTATCAGACGGAGAAACGGTCATCAATTCCCACGCAGT
GGTCATCGCGCGTCGTTCTTTGCTGGTCTTCCTGTACAGACAACTTGTGC
GGCTTTTCGAAGGACGTTTCTCTATTTTCGAATACCATGATAGAGAAGAT
GTGAAGATAGCACGCCTTCGACTGCATTACAAAATCCACCTCTATACGAA
AAACCCGCCTTGTGGTGACGCTTCAAACGTTTCAccacactcaaaacatg
caagTGATCATGACACAGCTAAGAAAAGTCATCGAGTATCAGACGGAGAA
ACGGTCATCAATTCCCACGCAGTGGTCATCGCGCGTCGTTCTTTGCTGGT
CTTCCTGTACAGACAACTTGTGCGGCTTTTCGAAGGACGTTTCTCTATTT
TCGAATACCATGATAGAGAAGATGTGAAGATAGCACGCCTTCGACTGCAT
TACAAAATCCACCTCTATACGAAAAACCCGCCTTGTGGTGACGCTTCAAA
CGTTTCAccacactcaaaacatgcaagTGATCATGAAGTTCGGAATGACC
ACCAGACGTATTGGTGCAAGAAGGACTCGATCAAAGGAGAAGGCCAGGTG
CTCAACGCAAAGTCAACTGCTGACATCGCATCTTGCTCTGATAAAATTCT
CCTCTGGAACTTCGTTGAGTTCGGAATGACCACCAGACGTATTGGTGCAA
GAAGGACTCGATCAAAGGAGAAGGCCAGGTGCTCAACGCAAAGTCAACTG
CTGACATCGCATCTTGCTCTGATAAAATTCTCCTCTGGAACTTCGTTGGA
CTTCAAGGCGCATTATTGGACACTTTGATCGAACCCATCTTCATGGATTC
CATTACAATCACCAATGATTACGTACCACGTGACTTAGTACGCGCTTTTT
GTTGCCGACTGTCCGCCGATCGACTCATTCAACACCCATGGATGCAAGTG
GGAGAGGTACGAGGTGTCCAATCTACATCTGCATATCACCAACCTAACGT
CAGTGCCTATTGGACACATAATGATCTAGGACTTCAAGGCGCATTATTGG
ACACTTTGATCGAACCCATCTTCATGGATTCCATTACAATCACCAATGAT
TACGTACCACGTGACTTAGTACGCGCTTTTTGTTGCCGACTGTCCGCCGA
TCGACTCATTCAACACCCATGGATGCAAGTGGGAGAGGTACGAGGTGTCC
AATCTACATCTGCATATCACCAACCTAACGTCAGTGCCTATTGGACACAT
AATGATCTAGagttGCAGGAGGAATTATTGAACATGCCAGCCAACGGAGG
TGTTTTGTTCGCCATGGTGGGTGGCCATTACAAAGGCTCTGCTCGTGATG
GGGAAATACCCATGATATGTAAACGGTTCCTTTTCATGCTCTACCAGCAA
GTCACCACGTTCCTCGATGAGAAGAGCACCGTCTTCAGCaaaaaaaCTTA
TAAACAAATCAAAGATATCAATGTCGAGTAtcgaaaaaagaagaatttgt
tttttaagatGGTCACTGAACAGAACTTAGGGAATTACCCTAAACTATTG
GATGACGTAGATGAGTTTTACTTGGATGATAACGTCGAACAGTAGagttG
CAGGAGGAATTATTGAACATGCCAGCCAACGGAGGTGTTTTGTTCGCCAT
GGTGGGTGGCCATTACAAAGGCTCTGCTCGTGATGGGGAAATACCCATGA
TATGTAAACGGTTCCTTTTCATGCTCTACCAGCAAGTCACCACGTTCCTC
GATGAGAAGAGCACCGTCTTCAGCaaaaaaaCTTATAAACAAATCAAAGA
TATCAATGTCGAGTAtcgaaaaaagaagaatttgttttttaagatGGTCA
CTGAACAGAACTTAGGGAATTACCCTAAACTATTGGATGACGTAGATGAG
TTTTACTTGGATGATAACGTCGAACAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000452_pilon | genome | sc0000452_pilon:136328..141460 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-1440:4801 |
| Aaloc | 877-1104:4421 |
| Aaloc | 745-873:4034 |
| Aaloc | 472-741:3456 |
| Aaloc | 340-468:3197 |
| Aaloc | 259-336:2898 |
| Aaloc | 67-255:1011 |
| Aaloc | 1-66:1 |
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