|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000179_pilon:157230..159810+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019922 ID=XLOC_019922|Name=XLOC_019922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2581bp|location=Sequence derived from alignment at sc0000179_pilon:157230..159810+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAAGCGAAAATTAACCTGGCAGAGACATGAAGTTGATTTATGTTA
TTGTTATCTTTCATCTGTACAACCTCATAAACACTGCCCCTGTTTAAATT
GTGAAGGCGCACCTGTACACGAAAAGACAGAGCGAAAACATcgcaaacaa
ttttttgaacgTTTTGGGGAAGAATTATCTGAAGATGAGGTTGGTAGTGG
CGAAAATAGTAGTAGTGATACCTCTAATTATGATTCAAATGAAGACAACC
GACAAAGCATGCAGCAGACAGACACTGAGGAAGAACAGAATTTTGACAGT
GATGACAACAGTCAAAATAGTGGCGGTCAAAGTGATGATAACAATCTTGA
TCTTAGTGATAACAATATCGGAGATGGTGTGGGAGAAAGAGATGTAGATG
AAGCCAATGAATTAAACCAATTGAATGTAGACATTGTCGTAAACAACAAC
CGGTAAGTTTCTTCATTtcatatttctatatttttgtgCATTATTGCTCT
GGTATATATCAGTCTCAGTAGGTTAGACTGGTAGACAAGAGGgccgcaaa
atttgtgtagaagATTTTTTATGATACAGTACCATAAGCTAGTTAGTCTa
ataatatcgacatccctcttctctaatttcgacacccttcatTAGATAGA
AATAATATgaaggtcagaatcgctgatggaaatttttttctttacttaaT
GATTCggagaggaaaaaatcttttgtctatcagtacTGATAGTCCGAATT
ACTGCAGTAATTCGGACGTTCCTATTATTCGCATCTCTGATAAGGGTTTC
GAAATTGGAGGaaggatgtcgacattagaccaacttaagtCTAATCTCGA
CAcccgtcttctaatttcaacacccttctttatagatatgaataatatga
aagttggaatcgaaaattttttcctctcttaccactaagcaaagaaaaat
agttttggcctttctattattttcagctCGTCGAATttagacaagggatg
tcgacattagaccaagttacggtagttGTTTGGGAGATCGCGACGGCCTA
TTgtataacaaattactccacatattTCATTACTCTTAgacatagtgtgc
accccccccccactctgCAgggggggTTTTGGATTTTTGGGTCCAAAACA
GCCAGGTGGGAGtctgaaattttggactttcagGTGGGGGAAATAGGTTG
AGGTGGGACTAGaaatctttaggtgggacttttatggaaatcttgaaaga
aaaattattttaaattttagatttttaaatatttgtctTTGAATCCTGTA
ATctgtttttcattgaaaattcccctaactttttattggaattttcaTTC
CAAACTGCCCGAAGTGCCAACTGTTTGCCAATCAAATATGCAAAAAAGTT
GGCCTTCATAAGGCAAAAATTAATGCTTTTAAACGAGtcattcgaaagtt
cgaaagaGTCTGCAAAGCCAATTAAAATCATTCTATTCTTCATGTACGTT
AGTTCCCTATTTTAGGTGGGACTTGGAAAGTCAACTATCAGGTGGGAGTT
TCTCAAGTGCTGGGACCTGAAATTTTAGGTGGTACCTTGAcccccccTGC
ACACTAtgctcttaggtgccaaataaacggggggttcaaataaaaagggg
gttcaaaaatcttTGAGATTTTAATATACGGGGAGGACCTAATTgctggg
gggttggaaattgcaCTTCTGaaagcccaaaaataaggtaaatataggct
aaaatcaggctatttagagcaaaataaggggccttctctttgacggctga
gaatatttttaaaaattaataaacaggggggtcctaataaggtccggggg
ttggaaaattttcaaaaaattaacaagcgggggggggctttatttggcac
ctaagagtagtaCTTTCCCTCAGCGATTAGCTTAAGTTTCTGTAAATCAT
AAATAGCACCGTGAAGTCGGggaacttgcatcagtggaggcaaacataca
tagccatcaaatgactgaccaatgaaagcagcaaaatttcaaaacaaatt
aactacgcagctccgctcgcagctctactctaccatttttgttttgattt
aagtttgtattttaatgaccagacaggtcattaatttgagggctatgtat
gttTGCCTCCACTTATGCAAGTTAGCCGACTTCACGGTGGTCAGTCTGTC
AGAGGATGTACtgtattgttcttatattttgtgAAAGATATTGCTTACTG
tagacttttttatttgaatcagcaatttcaaatatcttgtgtgaactaaa
tttttcaaaaatggtttaaATTACACAAAAATTGCATAAATCCTTAAATT
AGATAGAAATACAATAATATCTATAATTTCACCTTTAGTGGTCAAGTGTT
GGTGGAAAACCTACTTCAAACATTGACCCTAGCTTCTGATATGAACGCTT
CAATCTCAATGACGGAGAAACTTTTGGTGTATGTTGGCAGTTTGGTTAAC
AAGTTTTCAGATGTTGGAGATGATTGGCCAAAAACTTTTGCAAAGGCAAC
ATCCATCCTCAAAACAACAGGGCTGTACAGT Coding sequence (CDS) from alignment at sc0000179_pilon:157230..159810+ >XLOC_019922 ID=XLOC_019922|Name=XLOC_019922|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1290bp|location=Sequence derived from alignment at sc0000179_pilon:157230..159810+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAAGCGAAAATTAACCTGGCAGAGACATGAAGTTGATTTATGTTA
TTGTTATCTTTCATCTGTACAACCTCATAAACACTGCCCCTGTTTAAATT
GTGAAGGCGCACCTGTACACGAAAAGACAGAGCGAAAACATcgcaaacaa
ttttttgaacgTTTTGGGGAAGAATTATCTGAAGATGAGGTTGGTAGTGG
CGAAAATAGTAGTAGTGATACCTCTAATTATGATTCAAATGAAGACAACC
GACAAAGCATGCAGCAGACAGACACTGAGGAAGAACAGAATTTTGACAGT
GATGACAACAGTCAAAATAGTGGCGGTCAAAGTGATGATAACAATCTTGA
TCTTAGTGATAACAATATCGGAGATGGTGTGGGAGAAAGAGATGTAGATG
AAGCCAATGAATTAAACCAATTGAATGTAGACATTGTCGTAAACAACAAC
CGATGCCAAAGCGAAAATTAACCTGGCAGAGACATGAAGTTGATTTATGT
TATTGTTATCTTTCATCTGTACAACCTCATAAACACTGCCCCTGTTTAAA
TTGTGAAGGCGCACCTGTACACGAAAAGACAGAGCGAAAACATcgcaaac
aattttttgaacgTTTTGGGGAAGAATTATCTGAAGATGAGGTTGGTAGT
GGCGAAAATAGTAGTAGTGATACCTCTAATTATGATTCAAATGAAGACAA
CCGACAAAGCATGCAGCAGACAGACACTGAGGAAGAACAGAATTTTGACA
GTGATGACAACAGTCAAAATAGTGGCGGTCAAAGTGATGATAACAATCTT
GATCTTAGTGATAACAATATCGGAGATGGTGTGGGAGAAAGAGATGTAGA
TGAAGCCAATGAATTAAACCAATTGAATGTAGACATTGTCGTAAACAACA
ACCGTGGTCAAGTGTTGGTGGAAAACCTACTTCAAACATTGACCCTAGCT
TCTGATATGAACGCTTCAATCTCAATGACGGAGAAACTTTTGGTGTATGT
TGGCAGTTTGGTTAACAAGTTTTCAGATGTTGGAGATGATTGGCCAAAAA
CTTTTGCAAAGGCAACATCCATCCTCAAAACAACAGGGCTGTACAGTTGG
TCAAGTGTTGGTGGAAAACCTACTTCAAACATTGACCCTAGCTTCTGATA
TGAACGCTTCAATCTCAATGACGGAGAAACTTTTGGTGTATGTTGGCAGT
TTGGTTAACAAGTTTTCAGATGTTGGAGATGATTGGCCAAAAACTTTTGC
AAAGGCAACATCCATCCTCAAAACAACAGGGCTGTACAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000179_pilon | genome | sc0000179_pilon:157230..159810 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 454-645:2390 |
| Aaloc | 1-450:1 |
|
