XLOC_019900 (mRNA) -

Overview
NameXLOC_019900
Unique NameXLOC_019900
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000146_pilon:740351..741779-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019900 ID=XLOC_019900|Name=XLOC_019900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1429bp|location=Sequence derived from alignment at sc0000146_pilon:740351..741779- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTATCAACTTTACTTTAAAGGAGCAAGATGATACATTCTTTTATCA AATATCCTTAATGGAATTCCTTGCCCTTTGGGAAAATTTCTATGATGCAA CAAAGGAAGGAGATGGAAAAAGATTGATGAGGTGTTGGAAATTTTTAATA CCTTATTTTGTCCAAGATGGAATCCACAGCAACAAATACGCAATAGAGGC ATTTTACTTGGTCCTACAGCTCAACTGCCTGTTATCGCAAAAAGATGCAC ACAGTTTGATGTGGAATCGTTTTGCCAAAATGAAAAATGGCTCAGGTAAG TTATAAAATATAAAGGGAAGAAATTTTGGCGAATTTGGTAAATTGCCCAG AATTGCCTTAAAAATTCGCCAAATTCGCCAAAATTTCTTCCCGCAAAAAT TAATTTGCACTAGTCTCTATTTCTTTTAAAAACCTCTTTTTTCAGCTAAA ATATTCAACTAAAAATGGGTACAGTAGTTTGCCAAAATTAATTCTCACCA AATTTAAGATTTTATCAATTCCCCAAAATAATTTCCGCAAAATTGCATCA AAATTGGCAAATGGGCTCATTCATCAAAATTTCTTCCCGCCAAAATTTCT TCTCTTAGGGTAAAGTCTTTGATTTTAAATACTAAAGTGTTGTTTCGTGT CCCACAGTGCTCTACTTGAAAAATTTAAGATGTGATATTTAATTGTTTTC TCTGTTAAATTGCATCATTAAATATTCTATTCTAGGTGGTAACATTCCAC TTGATCTTGAGATGGAACATTGCATTCGCCTAATCAAGGTTATAAAGAGA AAGCTTGGACCAAATGCTTTGAATGAAGATGTGATGACAAGGTATTCCCA ATTCGATTTGTACTTTTTGATTATTAATTTTTTTATTTTTTGTATTGTGG ATATTCATGAATTTAGCTTATCAGGCAAGTTGTCTCGAAGAAAAGCATGT CAGAAAACCTTTTTTTAACCCATCGAGTAAATAAATATGGATTTCACGAT TTGTACTTTTGGGAGAAAATAGTATAGATAAGGGCAGTAGGGAATTGTTG ACAGATGGTGTTTCCTACATCATCAGAAGTGCCTGACATTTAATAACCCA AGGAGTAATTTTTCTTCTTGTATTTTTTTTTTTACATCAGGTATGCAAGG GCCTTGAATTTCAACAAAGATCTGCTTGAAAAGTACGACAATGAAAATGG CTTGAAAAGAAGATCTGGGAAGCATGTTAAGAAAAGAGATGATCAAGATT TAAAAAAGCTGGTTGAAAAACTTCAAAAAGAAAAATCATTACAAATCAGT CCGAATCGCACATATAAATTTTATCCTAATATGAAAGAAAGTATTTTGGT TAACTTTGATATGTCGAACTTTCATGGTTGGCTCAATAAACACAAGGAGC AAATGATAAGTGCAAAGACTGTTAGATAA

Coding sequence (CDS) from alignment at sc0000146_pilon:740351..741779-

>XLOC_019900 ID=XLOC_019900|Name=XLOC_019900|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1380bp|location=Sequence derived from alignment at sc0000146_pilon:740351..741779- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTTTATCAACTTTACTTTAAAGGAGCAAGATGATACATTCTTTTATCA
AATATCCTTAATGGAATTCCTTGCCCTTTGGGAAAATTTCTATGATGCAA
CAAAGGAAGGAGATGGAAAAAGATTGATGAGGTGTTGGAAATTTTTAATA
CCTTATTTTGTCCAAGATGGAATCCACAGCAACAAATACGCAATAGAGGC
ATTTTACTTGGTCCTACAGCTCAACTGCCTGTTATCGCAAAAAGATGCAC
ACAGTTTGATGTGGAATCGTTTTGCCAAAATGAAAAATGGCTCAGTTTTT
TATCAACTTTACTTTAAAGGAGCAAGATGATACATTCTTTTATCAAATAT
CCTTAATGGAATTCCTTGCCCTTTGGGAAAATTTCTATGATGCAACAAAG
GAAGGAGATGGAAAAAGATTGATGAGGTGTTGGAAATTTTTAATACCTTA
TTTTGTCCAAGATGGAATCCACAGCAACAAATACGCAATAGAGGCATTTT
ACTTGGTCCTACAGCTCAACTGCCTGTTATCGCAAAAAGATGCACACAGT
TTGATGTGGAATCGTTTTGCCAAAATGAAAAATGGCTCAGGTGGTAACAT
TCCACTTGATCTTGAGATGGAACATTGCATTCGCCTAATCAAGGTTATAA
AGAGAAAGCTTGGACCAAATGCTTTGAATGAAGATGTGATGACAAGGTGG
TAACATTCCACTTGATCTTGAGATGGAACATTGCATTCGCCTAATCAAGG
TTATAAAGAGAAAGCTTGGACCAAATGCTTTGAATGAAGATGTGATGACA
AGGTATGCAAGGGCCTTGAATTTCAACAAAGATCTGCTTGAAAAGTACGA
CAATGAAAATGGCTTGAAAAGAAGATCTGGGAAGCATGTTAAGAAAAGAG
ATGATCAAGATTTAAAAAAGCTGGTTGAAAAACTTCAAAAAGAAAAATCA
TTACAAATCAGTCCGAATCGCACATATAAATTTTATCCTAATATGAAAGA
AAGTATTTTGGTTAACTTTGATATGTCGAACTTTCATGGTTGGCTCAATA
AACACAAGGAGCAAATGATAAGTGCAAAGACTGTTAGATAAGTATGCAAG
GGCCTTGAATTTCAACAAAGATCTGCTTGAAAAGTACGACAATGAAAATG
GCTTGAAAAGAAGATCTGGGAAGCATGTTAAGAAAAGAGATGATCAAGAT
TTAAAAAAGCTGGTTGAAAAACTTCAAAAAGAAAAATCATTACAAATCAG
TCCGAATCGCACATATAAATTTTATCCTAATATGAAAGAAAGTATTTTGG
TTAACTTTGATATGTCGAACTTTCATGGTTGGCTCAATAAACACAAGGAG
CAAATGATAAGTGCAAAGACTGTTAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_019900XLOC_019900-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146_pilongenomesc0000146_pilon:740351..741779 -
Properties
Property NameValue
Aaloc403-690:289
Aaloc298-399:693
Aaloc1-294:1430