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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000263_pilon:61194..64175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019814 ID=XLOC_019814|Name=XLOC_019814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2982bp|location=Sequence derived from alignment at sc0000263_pilon:61194..64175- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAACTCTTTCACTATTGCTTGCATATTTCTAGCAGTATGGTCGAC
TGCCTATTCACGTAAGTACACGCTATTTTATTCATAAGGCTCAAATTTAC
AAAAAAATTGAGAATTCTTTAAGGAAATATTTTTATATAAAATATTTATT
TTTAGCCTCAAAGATTTGTTCAGTTTTTTTATTCAGTTAGGACTTTTCAG
GTTTTCGCTTTTTTTGTTTTCTTTTTGCATTGAAAATCTTTAAGAATCAA
GGCTAGACGAGACTTAATTATTATAAATCATTTCGGTGAATAGAAGTTAA
TCTCTCCCATCTTCATGACTTTTAACAACCTGTTCGAGAGGTTTAATTTA
TGAATTTAACTCACTTAATTTTTAACCAACAATTCATATGGTTTATTAAG
CCGATTATTGATGATGTTCTTAATTTCTTTTTTTCAGTAAATGGTCTTGA
CCTGAAAAAACCAAGTAAGAATTATTGCTTCCTAATTTCCCTTCTTCGTC
AATGCAGTTTGAGACAATAGTTTTTTTTTTCAGAATCAGTTTCAGAGATT
CATTTGAATTCCCCTCCCCTTGTTTTTCATTTTTTGAAAGTATCTTAATC
TTTTCCTGATTTTCACCTAAGATTTTAATAACTTTTATATAATCGGTCCA
TTTTTCCTTTTCGACTGTGGCCCTTACCATTTAATATTTACGAGTAACAA
ACATTCATTCACTTTTTGAGGCTACTTATCAAATCTGTTTTATCACAGGG
CAATTCGTTAAAGCTCTGAACATGGTTAACCAAGAATGCAACGCCGTCAA
TGTGCGTGCCATGAAAGCTATGATGACAAGTGGGTTTGCATTTTTCTTTT
TCATTTTTGCTGACTATTCTTTCTTATGTGTCTAATATTGGTAAAGTTCT
CCATAAAGTGAATATAACTTGAAAATACACGTTTTTTATAAGAACATCCA
AAATCTTTTAAGCCTTTGGATTTTCTTAACTTCGTGAGTTTTAAGCCTAA
AATATTCAAATTCTCAAGCATTTTTGTCCATTTTCCTAAGACCATAGTAT
AAGAAAGCCGCGGCTTTCTTATACTATGCTAAGACACTGGCTGTTTTGAG
TCCGTGAAGTCTTATAATGTTTTTAACTTCTTCGTAATATTTTGGCCATC
AAACCTTATTTAGTTTGTTCTTATGAAAAACGTGTATTCCTTCTTTCAGC
CGACCCTTCGAAAGTTGACATTGTCAAAACACAAGCAAAAATTGATGGAT
TGTTGGATGACGTTGAAAAGTTAGAACATGCATTATCCAAATTGAGACTG
GGACCGCGTCAGCGCAAAGGACTTACCAAAAAATTGGAAAACTTGAAAAA
GAAAGTTCAAATGAAAGCGAACAGCTTGAGCAGTATCACTGAAAATGCTA
GTTGTTTCGGCCAAAAAAGTATTTTCAACGCCCATCTTGCAAAAGCTGAC
AGTTCTTTCAATAACTTGTTGGAGCAATTTGACAAAGTGAAAGAAGAATG
CAATGGTGAGCTTTTTGGAATATTCGAATAAAGTTTTAATCTCTCCTTAA
AGGTATTGGGAAAAATTGCTGCAAGCAACTTCTTTAGATTAAGAATGAAT
TTTGTCAAACTTACTTTCTAGTCGGAGAAACTGTCACTCAAGAGCGTAAC
TAACAGAATACCATACAATTCTTAATATAATTCATGTAACTTCCTTTCCA
TACTCAGTGTTCTCTAAACCATGCGTACACAAATTCACTCACATCAAAGA
AAAGTTCTCCAAGTTAAACATGAATAATGTGCAACCCATCAAAGGAAAAG
TGGATGAGCTGAAGACTGCTGGTTGCTTTGTTTCACAAGCAGATCGTGCT
GCTTACAGTAAAAAGATGCTAGATATCGAGTGTCGTGTGGAGGGAATGAT
CATTTTTGTACAATCGGCACTCTCTGACTTGATCAAAGCTGAACTTATGA
TAGTGTCGGACACGAAAACAACATTGGAGAGTTTGTTGAATGGCAACGTT
AGTATGGAAACTGATGGTAAGTGTAGATACCCATTCTAATAAAGAAAGTA
TTTTGACAGAAGAGTCTAAATCAATTTAAGTACAATTTTCCAGAATTACT
ACCACAATAAATTGCTTTTCCCTTTAAATCGAATATATTGTTCAAATCAA
TTAAATCCATAACGATTTTCAAACACTTTGGCCGATGTAGGGGCTTATAG
GGGTACGAAATACCGTTTTAAATACCGTACTAAAAAGGCCAATCCCGTCA
CACCTTAAAAGTAACCCCCAAATATAGGCAAGCTTTTTTTCTAGTTAAAG
GAAACAAATTGGACACACGAGCTATTCATCTGAAAATCAAGGATATCTTT
CATCAATCGATCGTTTTGAAAAAAAGGTTCATCATTGTGTATGATTGTAT
CTACGACATCAGAGGCTGGATTGCCGGCACCGATTACGACAACCTCCATG
TGGGCGCAAATGATATGTATTGGGGTCTGGGAAACCTTTGTGTTTCAATT
GATAACGCTCTCACCCTTTGGGATCGACTTGAGAAAGAAGAATGCTTCAA
GGAGGATGTTGACAAGAAGAAAAAGGAAGTGACTCAGTTGGAAACTGACA
TCAATAGTGTGTTCAGCGAAATTGGTGATACTGGTAAGTTTAATTGTAGT
CATCATTTCGTCGTGTTTTTGCCATGATAAAAACACTTTATTAGGTTACT
TTTCATTAAATTCATCCATTGAAATCTTTTTCAGCGAGCATGGTGTGCGG
TGACTTGCTAAACAAAGCACGAACAGAAACTGAAAAATTAAAAGTAAAGC
TGACCGTTTGCGGTAACGAGGCGAATCGGTTGAAAGCTCAGGTCACTAAA
GAACTGACTACTGGAGACGAGCTGATGATCATTATGGGAGATGTTGACAT
GATCATAACGGATATAAAAACGCACAACACACTTGCTGAAAAGAATCATT
ACTTCTTGAGAATCTTCGACCATTTGTACTGT Coding sequence (CDS) from alignment at sc0000263_pilon:61194..64175- >XLOC_019814 ID=XLOC_019814|Name=XLOC_019814|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2742bp|location=Sequence derived from alignment at sc0000263_pilon:61194..64175- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAACTCTTTCACTATTGCTTGCATATTTCTAGCAGTATGGTCGAC
TGCCTATTCACATGAAAAACTCTTTCACTATTGCTTGCATATTTCTAGCA
GTATGGTCGACTGCCTATTCACTAAATGGTCTTGACCTGAAAAAACCAAT
AAATGGTCTTGACCTGAAAAAACCAAGGCAATTCGTTAAAGCTCTGAACA
TGGTTAACCAAGAATGCAACGCCGTCAATGTGCGTGCCATGAAAGCTATG
ATGACAAGGCAATTCGTTAAAGCTCTGAACATGGTTAACCAAGAATGCAA
CGCCGTCAATGTGCGTGCCATGAAAGCTATGATGACAACCGACCCTTCGA
AAGTTGACATTGTCAAAACACAAGCAAAAATTGATGGATTGTTGGATGAC
GTTGAAAAGTTAGAACATGCATTATCCAAATTGAGACTGGGACCGCGTCA
GCGCAAAGGACTTACCAAAAAATTGGAAAACTTGAAAAAGAAAGTTCAAA
TGAAAGCGAACAGCTTGAGCAGTATCACTGAAAATGCTAGTTGTTTCGGC
CAAAAAAGTATTTTCAACGCCCATCTTGCAAAAGCTGACAGTTCTTTCAA
TAACTTGTTGGAGCAATTTGACAAAGTGAAAGAAGAATGCAATGCCGACC
CTTCGAAAGTTGACATTGTCAAAACACAAGCAAAAATTGATGGATTGTTG
GATGACGTTGAAAAGTTAGAACATGCATTATCCAAATTGAGACTGGGACC
GCGTCAGCGCAAAGGACTTACCAAAAAATTGGAAAACTTGAAAAAGAAAG
TTCAAATGAAAGCGAACAGCTTGAGCAGTATCACTGAAAATGCTAGTTGT
TTCGGCCAAAAAAGTATTTTCAACGCCCATCTTGCAAAAGCTGACAGTTC
TTTCAATAACTTGTTGGAGCAATTTGACAAAGTGAAAGAAGAATGCAATG
TGTTCTCTAAACCATGCGTACACAAATTCACTCACATCAAAGAAAAGTTC
TCCAAGTTAAACATGAATAATGTGCAACCCATCAAAGGAAAAGTGGATGA
GCTGAAGACTGCTGGTTGCTTTGTTTCACAAGCAGATCGTGCTGCTTACA
GTAAAAAGATGCTAGATATCGAGTGTCGTGTGGAGGGAATGATCATTTTT
GTACAATCGGCACTCTCTGACTTGATCAAAGCTGAACTTATGATAGTGTC
GGACACGAAAACAACATTGGAGAGTTTGTTGAATGGCAACGTTAGTATGG
AAACTGATGTGTTCTCTAAACCATGCGTACACAAATTCACTCACATCAAA
GAAAAGTTCTCCAAGTTAAACATGAATAATGTGCAACCCATCAAAGGAAA
AGTGGATGAGCTGAAGACTGCTGGTTGCTTTGTTTCACAAGCAGATCGTG
CTGCTTACAGTAAAAAGATGCTAGATATCGAGTGTCGTGTGGAGGGAATG
ATCATTTTTGTACAATCGGCACTCTCTGACTTGATCAAAGCTGAACTTAT
GATAGTGTCGGACACGAAAACAACATTGGAGAGTTTGTTGAATGGCAACG
TTAGTATGGAAACTGATGTTAAAGGAAACAAATTGGACACACGAGCTATT
CATCTGAAAATCAAGGATATCTTTCATCAATCGATCGTTTTGAAAAAAAG
GTTCATCATTGTGTATGATTGTATCTACGACATCAGAGGCTGGATTGCCG
GCACCGATTACGACAACCTCCATGTGGGCGCAAATGATATGTATTGGGGT
CTGGGAAACCTTTGTGTTTCAATTGATAACGCTCTCACCCTTTGGGATCG
ACTTGAGAAAGAAGAATGCTTCAAGGAGGATGTTGACAAGAAGAAAAAGG
AAGTGACTCAGTTGGAAACTGACATCAATAGTGTGTTCAGCGAAATTGGT
GATACTGTTAAAGGAAACAAATTGGACACACGAGCTATTCATCTGAAAAT
CAAGGATATCTTTCATCAATCGATCGTTTTGAAAAAAAGGTTCATCATTG
TGTATGATTGTATCTACGACATCAGAGGCTGGATTGCCGGCACCGATTAC
GACAACCTCCATGTGGGCGCAAATGATATGTATTGGGGTCTGGGAAACCT
TTGTGTTTCAATTGATAACGCTCTCACCCTTTGGGATCGACTTGAGAAAG
AAGAATGCTTCAAGGAGGATGTTGACAAGAAGAAAAAGGAAGTGACTCAG
TTGGAAACTGACATCAATAGTGTGTTCAGCGAAATTGGTGATACTGCGAG
CATGGTGTGCGGTGACTTGCTAAACAAAGCACGAACAGAAACTGAAAAAT
TAAAAGTAAAGCTGACCGTTTGCGGTAACGAGGCGAATCGGTTGAAAGCT
CAGGTCACTAAAGAACTGACTACTGGAGACGAGCTGATGATCATTATGGG
AGATGTTGACATGATCATAACGGATATAAAAACGCACAACACACTTGCTG
AAAAGAATCATTACTTCTTGAGAATCTTCGACCATTTGTACTGTCGAGCA
TGGTGTGCGGTGACTTGCTAAACAAAGCACGAACAGAAACTGAAAAATTA
AAAGTAAAGCTGACCGTTTGCGGTAACGAGGCGAATCGGTTGAAAGCTCA
GGTCACTAAAGAACTGACTACTGGAGACGAGCTGATGATCATTATGGGAG
ATGTTGACATGATCATAACGGATATAAAAACGCACAACACACTTGCTGAA
AAGAATCATTACTTCTTGAGAATCTTCGACCATTTGTACTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000263_pilon | genome | sc0000263_pilon:61194..64175 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1126-1371:247 |
| Aaloc | 787-1122:687 |
| Aaloc | 478-783:1274 |
| Aaloc | 172-474:1782 |
| Aaloc | 91-168:2233 |
| Aaloc | 64-87:2544 |
| Aaloc | 1-60:2983 |
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