XLOC_019770.3 (mRNA) -

Overview
NameXLOC_019770.3
Unique NameXLOC_019770.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000345_pilon:172869..173406+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019770.3 ID=XLOC_019770.3|Name=XLOC_019770.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=538bp|location=Sequence derived from alignment at sc0000345_pilon:172869..173406+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAGAAAAGCTATGCCATCTGTAACgggaaaatctacaaaaaggc
TCCAGATAGTGCTTTCTCTTATGTGTACTGTCTTACAGTGAAGAGGTTCC
TGATGAGATCACTCCGTGTTGGCTCGGTCGCCAATGTGCTGGCATCGCAC
ATCAATTCGGTATCGAATTTGCTTTCAGATCCAGACTGCGGATTGATAAA
GCCACTGAAGATACTTTACAATATCATTGAAGTGTTGCCGGCACGTACTA
TCTTCGTAATTTCAGAGAAGCGGTTTTACAAAATCAGGAATTTTCCTGAA
GGGTGCACACCCCGTGCGTTCATCCGCTACACATATGATAAATCATACGT
ACCATATCCTGGACCTTTCATCCAAGGTAACCACTTCCAGATTTTTAAAT
TGGCCTTTGTCATTTCGACACATTTCGATATACTTGAAAAGTGACATAAA
ACTTTTGaactttgtaaatttgtttgaaaCTATGAAAaccttctttttgt
ttttctcttcagGAATAATGAACAGTTTTCCCGAACGG

Coding sequence (CDS) from alignment at sc0000345_pilon:172869..173406+

>XLOC_019770.3 ID=XLOC_019770.3|Name=XLOC_019770.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=804bp|location=Sequence derived from alignment at sc0000345_pilon:172869..173406+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAGAAAAGCTATGCCATCTGTAACgggaaaatctacaaaaaggc
TCCAGATAGTGCTTTCTCTTATGTGTACTGTCTTACAGTGAAGAGGTTCC
TGATGAGATCACTCCGTGTTGGCTCGGTCGCCAATGTGCTGGCATCGCAC
ATCAATTCGGTATCGAATTTGCTTTCAGATCCAGACTGCGGATTGATAAA
GCCACTGAAGATACTTTACAATATCATTGAAGTGTTGCCGGCACGTACTA
TCTTCGTAATTTCAGAGAAGCGGTTTTACAAAATCAGGAATTTTCCTGAA
GGGTGCACACCCCGTGCGTTCATCCGCTACACATATGATAAATCATACGT
ACCATATCCTGGACCTTTCATCCAAGATGAAGGAGAAAAGCTATGCCATC
TGTAACgggaaaatctacaaaaaggcTCCAGATAGTGCTTTCTCTTATGT
GTACTGTCTTACAGTGAAGAGGTTCCTGATGAGATCACTCCGTGTTGGCT
CGGTCGCCAATGTGCTGGCATCGCACATCAATTCGGTATCGAATTTGCTT
TCAGATCCAGACTGCGGATTGATAAAGCCACTGAAGATACTTTACAATAT
CATTGAAGTGTTGCCGGCACGTACTATCTTCGTAATTTCAGAGAAGCGGT
TTTACAAAATCAGGAATTTTCCTGAAGGGTGCACACCCCGTGCGTTCATC
CGCTACACATATGATAAATCATACGTACCATATCCTGGACCTTTCATCCA
AGGAATAATGAACAGTTTTCCCGAACGGGAATAATGAACAGTTTTCCCGA
ACGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_019770.3XLOC_019770.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000345_pilongenomesc0000345_pilon:172869..173406 +
Properties
Property NameValue
Aaloc379-402:515
Aaloc1-375:1