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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000319_pilon:265179..269239- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019751 ID=XLOC_019751|Name=XLOC_019751|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4061bp|location=Sequence derived from alignment at sc0000319_pilon:265179..269239- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATGCAGAACTTTTTGGAGCTCAAGAAAACTCTCTAGGCAGCCT
GGACGACATTGTCAATCCAACTGATGCCGATGACGAGTCTCAAAATCCAA
ACTGTTCAAAGAAAAAACTAAAGAAGCGCTCTTCCATTGTATCATCATGT
TCAAAAAACGATAAGCAACAAGATCCCAAAAGCACACCATTACGTTGTTC
AAAACATTTAAAAAAACGAGATCCAGCAAGCACACCTACTTCAAAAAGAA
GTAAATGTAAGATGTTAATTATTGTTAAATTTTTGAAACTTCTATTTTGA
CACTTTCAGTCTGAAGCTTGTAGGTATATGACAGTCAGGAGTAATACCTT
AAACAAGGCGTATACCTTGTTCAAGTAAGAATTCCATATTTCTATTGTAC
GATACTTCCTATTTAGGCACTCTCTCTTCTATACCATTGGAAAGAGCACA
AGAAACTGAATTGCCATGGTGATTTTTAGTAAATTCCACAGCCGGAATTG
ATCACAATCTTAAAACAACCTTAAAGTCCAGTCTACATGAAACGAAATCA
GCTTTTTTAAAGGGTGTAGAAAGAGCTTTACACAAAAAATACAAAACAAT
TTAAAATGGTACCTGACGACTGTAGATTTTGATAATTTTTTCACTACTTG
GTCAATCAAAGACTCCTCTTTCCTATTTGCTAAAATTCAATATGCCCTTT
TTCCTATAACACATTAAAATCGATGTTTTTTCAGGAAATCTTTAAAAATA
CCCTTACTTAAACAAGGTATATGCTTGTACCTTGTTTAAGGTACCTCCTA
AACAAGTTATACACCGTGTTTAAGGTATTACTCCTGACTGTATGAAATGA
ATTTAAAATATAAATAAAAAATAGATGAAATTAATTAAAGGAGATCACTC
AAACGCCTCATATCTAAAGGAAGAACCATAATTTTTTTGTACAAAGGAGG
TGTGTTTCAAGAGGCCATCTACTTAGTCTGTACGCAATAAGGGAGATGAG
TGTCAGCTGAAAGCTGACCTGCTTATTGGTGTAGTACTTCTCTAAACTAT
TTTAGTTTTCCCTTTTTGTCAACAATCATCACAATTATTGTCCAAACAAT
ATCCCAGCTTGCCGTTATACATGCCTCTTTCATTTTTTTAAGCTCCTCCT
ATCATTGCTGAGCGACCAATTGTAGTTGAACATACAGGAGATACACCAAC
ACAAGAATGGTCAACAACAGGAATAGCATGTGAGTAATGGTAGTTAATTA
AGGGTAGAAGGGATCTTAGAGCAGGGGAAGAGCCTATTTAATAATCACCA
ATCAATGGGGAAAATGCCTTACAAAAGGAGGAATATTTTATTATTATATT
TGTGTTGAATAAGTTGAATAATGTGCAAGTTATTTTGTTACAAGTTGAAA
CCTTTCTGAAAACAATTGTGATAAAACTTATTATTTGGAAAATTATTATA
ATTAAAGTATAACTTGGGCCATTACATTATGCCAAATTAGACATGAAGGC
TCTTAAAATATAGAGTTTTTCTTGGGGTGACTTCACTTTGCGAAACATAT
TCATGGAGGGTGTACACTATGAGTGGTTAAGTGATTTTCCAAATAAAGAG
GTCCCTCTTGATTGAGAGAAAACTTTATAGATACTCCTTTCTCCTATAAA
ATGATTCACCTTCCCTGATTATCAACTTGTTGTTTTGTTTTCTTAGGTTT
CAACGACTATGACATTGATAGAATCAATACTAGGCAGATAAAACTTATGA
AGCGCATAGAAGCCATGGAAGAGAACGACGAAAGTTTGGAAAAGAAGTTG
GAAAGGATGGAGAGGAAATATGAAAGGATGGAGGAGAAATTGTCGAATAT
GGAAGAAGAAGTTGAGGAAATGAAACAGTCAAGAAAAAAGAAAAAAGTTG
AAGTCCGAAAAATGACCAAAGTATGGAAAAGTTTATTTTATAAATGAATT
TTCTTTGCCCAGCCAGATTTACCAAAATTACATATTAAAAGGCAATAAAA
ACTATAATGGTTATGAGCTAGTATAGCTTTGGATGCTTATTTGCTGAATG
GAGAGAACATCCCCTAGTTTTATTTTGTGGTCTTATGGGCTGCACATCTA
TCTATTTCTTAGGTGGCACAAAGCGCAAGCCCATACATAAAGTACTTACT
TTTAAGTCTGTTTCATTTTCAAAAAACTGTAGCAGTAAAACTACAACACT
TGATTTTTTAGACAAATGTGAAAAGCTGCTATCTAGAAATGGTGGATAAA
GGAAAACAATTTGATTTGAAAGCAGGGTAAGGCAGTCTTCAAGTCAATAG
TAACATCATAAACCGACTAAAAGAATGAGTTACAAAACTTTATTTTTGAA
AATCAAAGTTGTGACTCATTCTTTTTAAATATCATCAAAACTTATCAAAC
TGGTTTTATATGATAACAGTTCATTGAGTTTGATAAATAACTTTCATCAA
ATTCCCTCAATTTTTCAAAGTCATATCAGTTCCATTAATTGTGATTAAAG
CATAAGGTGTAAGGGACTTTACCCAGACACCAAGTAGTTTGATAAAGCTT
GACTAAAATGATTTCAGCATTTGGAACATTTATACACTCAGGTGCATTTA
TGGAATCTAAAACTTTGCTTTATGTTAGTAAAACATAAAAATGATTTTTC
TAGTGTGCATAGTGGATCAAACAAAGGTTTGGTGGAGCAATTGAAGTTGG
ACTTGTATGGGCTTGATACTTCGTTGACCGAAGAAGAAGCTGACAGTAAG
TGCTTTAAATACATGTATGTTCAACTTTAAATTTTGACCATTGGAATGGT
TCTTGCGTTATTGTGAAGAATGTGTTTCAACTTTTGTAAATTCTTCAAAT
TTGCTAGGAGGAAGCCTTCTTTCTTTCTCTGTGTCACTTGATGGATGTAG
GATATTACAATTTTCAGACATCCCCTACCCGCGACAAGCAACCCCTAAGT
TTAACCCCCAGATAAGTAATATATGTTCCTAAGATGTATGGGCATTCTCT
AGAAGAGGCTATTGATGAACTTAATGTGATAAAATTTCAATTCTCAAGGC
TCTGACTGAACCTTTTATCCTTGTCTATTTTCTCAAATGTCATAAAATAA
TTTTTTCTCGTCTCTTTCAGCTGCCATTGCCACTTACTACAATTCTGTCA
AATATTATCAGCCAAAGAAGAATGACGAGAGCAGGAATACAGCCAAACTT
AATGGGAGAAAGAGAGAGGTAAATGATATGTTTTTGCAAAAAAAAATCAG
ATAAGCAGAACTTGGTGAATTATCATTTAGTTTTAATAACCTTTTCATGG
TGTCCTTCAGTGTGCCCATCCATACTTGCAATGAATATTTTTCCTTCTCC
CCTTTAGTTTTCCCCATCCTGGTCAATAATTTTGTTGCCTCAAAATGCCT
TTAATTTTGGATTCTTACTTAAAAATTGCCAGTTTTTCCTTTTTGCGATT
AATTCACATATATGGCAGCAAGAACACACATATATGTCACCCAAAACAAG
TTTGTCCCCTTATTATTTAGATGATATGCAAAATCCTTTTACCCCTTTAA
ATTCCCACACCTGGCTCCAGAAAAAATTGTCACCCTCTATACTTGATGTT
TTTTTCAAATCCATCTAGAGGATTAATTTTTCCAAACATCAGTGCAGTAT
TTAGAGGGTATTTAGAAAGACCAGAGCAGAACTGCATGACAGGGAATCAA
AAGTGACGGTGCATTTTAAACAATTTATTCTCCTTTTCAGAAATTGAACA
AACGCAAGAAGGCATTAGAAGATGGACCTTTCAAAGATGCTGATAGGGCT
ACAGCACTCAAAGTCCTTATTATGGACTTCATGTCGTCTGAAGAGGATGA
ACTGGACGGTAGTTTTAGTGTGCGACCTTTAAGATGGAGATCAACGATGT
GTGATGATATGTTTGAACGGTTGGACCAGAAAACGAAAGACAAAATGTCA
GCCAATTCTAGACGGCAAACAGTATCGCGAAAAATTGGACTGATTAGCGG
AAGAGGAATGCCTAGAAAGCTCCCAGACAAGACCGAATGGGCAGTACGTA
AAAGTCAATGA Coding sequence (CDS) from alignment at sc0000319_pilon:265179..269239- >XLOC_019751 ID=XLOC_019751|Name=XLOC_019751|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2286bp|location=Sequence derived from alignment at sc0000319_pilon:265179..269239- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATGCAGAACTTTTTGGAGCTCAAGAAAACTCTCTAGGCAGCCT
GGACGACATTGTCAATCCAACTGATGCCGATGACGAGTCTCAAAATCCAA
ACTGTTCAAAGAAAAAACTAAAGAAGCGCTCTTCCATTGTATCATCATGT
TCAAAAAACGATAAGCAACAAGATCCCAAAAGCACACCATTACGTTGTTC
AAAACATTTAAAAAAACGAGATCCAGCAAGCACACCTACTTCAAAAAGAA
GTAAATATGTCTGATGCAGAACTTTTTGGAGCTCAAGAAAACTCTCTAGG
CAGCCTGGACGACATTGTCAATCCAACTGATGCCGATGACGAGTCTCAAA
ATCCAAACTGTTCAAAGAAAAAACTAAAGAAGCGCTCTTCCATTGTATCA
TCATGTTCAAAAAACGATAAGCAACAAGATCCCAAAAGCACACCATTACG
TTGTTCAAAACATTTAAAAAAACGAGATCCAGCAAGCACACCTACTTCAA
AAAGAAGTAAATCTCCTCCTATCATTGCTGAGCGACCAATTGTAGTTGAA
CATACAGGAGATACACCAACACAAGAATGGTCAACAACAGGAATAGCATC
TCCTCCTATCATTGCTGAGCGACCAATTGTAGTTGAACATACAGGAGATA
CACCAACACAAGAATGGTCAACAACAGGAATAGCATGTTTCAACGACTAT
GACATTGATAGAATCAATACTAGGCAGATAAAACTTATGAAGCGCATAGA
AGCCATGGAAGAGAACGACGAAAGTTTGGAAAAGAAGTTGGAAAGGATGG
AGAGGAAATATGAAAGGATGGAGGAGAAATTGTCGAATATGGAAGAAGAA
GTTGAGGAAATGAAACAGTCAAGAAAAAAGAAAAAAGTTGAAGTCCGAAA
AATGACCAAAGTTTCAACGACTATGACATTGATAGAATCAATACTAGGCA
GATAAAACTTATGAAGCGCATAGAAGCCATGGAAGAGAACGACGAAAGTT
TGGAAAAGAAGTTGGAAAGGATGGAGAGGAAATATGAAAGGATGGAGGAG
AAATTGTCGAATATGGAAGAAGAAGTTGAGGAAATGAAACAGTCAAGAAA
AAAGAAAAAAGTTGAAGTCCGAAAAATGACCAAAACAAATGTGAAAAGCT
GCTATCTAGAAATGGTGGATAAAGGAAAACAATTTGATTTGAAAGCAGGA
CAAATGTGAAAAGCTGCTATCTAGAAATGGTGGATAAAGGAAAACAATTT
GATTTGAAAGCAGGTGTGCATAGTGGATCAAACAAAGGTTTGGTGGAGCA
ATTGAAGTTGGACTTGTATGGGCTTGATACTTCGTTGACCGAAGAAGAAG
CTGACATGTGCATAGTGGATCAAACAAAGGTTTGGTGGAGCAATTGAAGT
TGGACTTGTATGGGCTTGATACTTCGTTGACCGAAGAAGAAGCTGACACT
GCCATTGCCACTTACTACAATTCTGTCAAATATTATCAGCCAAAGAAGAA
TGACGAGAGCAGGAATACAGCCAAACTTAATGGGAGAAAGAGAGAGCTGC
CATTGCCACTTACTACAATTCTGTCAAATATTATCAGCCAAAGAAGAATG
ACGAGAGCAGGAATACAGCCAAACTTAATGGGAGAAAGAGAGAGAAATTG
AACAAACGCAAGAAGGCATTAGAAGATGGACCTTTCAAAGATGCTGATAG
GGCTACAGCACTCAAAGTCCTTATTATGGACTTCATGTCGTCTGAAGAGG
ATGAACTGGACGGTAGTTTTAGTGTGCGACCTTTAAGATGGAGATCAACG
ATGTGTGATGATATGTTTGAACGGTTGGACCAGAAAACGAAAGACAAAAT
GTCAGCCAATTCTAGACGGCAAACAGTATCGCGAAAAATTGGACTGATTA
GCGGAAGAGGAATGCCTAGAAAGCTCCCAGACAAGACCGAATGGGCAGTA
CGTAAAAGTCAATGAAAATTGAACAAACGCAAGAAGGCATTAGAAGATGG
ACCTTTCAAAGATGCTGATAGGGCTACAGCACTCAAAGTCCTTATTATGG
ACTTCATGTCGTCTGAAGAGGATGAACTGGACGGTAGTTTTAGTGTGCGA
CCTTTAAGATGGAGATCAACGATGTGTGATGATATGTTTGAACGGTTGGA
CCAGAAAACGAAAGACAAAATGTCAGCCAATTCTAGACGGCAAACAGTAT
CGCGAAAAATTGGACTGATTAGCGGAAGAGGAATGCCTAGAAAGCTCCCA
GACAAGACCGAATGGGCAGTACGTAAAAGTCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000319_pilon | genome | sc0000319_pilon:265179..269239 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 820-1140:322 |
| Aaloc | 724-819:940 |
| Aaloc | 631-720:1408 |
| Aaloc | 565-627:1851 |
| Aaloc | 343-564:2364 |
| Aaloc | 256-339:2918 |
| Aaloc | 196-252:3864 |
| Aaloc | 1-195:4062 |
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