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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:557631..560549- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019685 ID=XLOC_019685|Name=XLOC_019685|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2919bp|location=Sequence derived from alignment at sc0000228_pilon:557631..560549- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTTTCTTTATGATTAAAACAGGTATGGTTTTTGGACTATCATTTGC
GAAGACACCCCTGTGTCACAGACCCGCTGGACAATTTGGCAAAAATTTGG
TCCCCGCTGGGAAAATACCCTGGAATTTCAGCCCTACTGGGAAATTGACT
TTGAATTTTGACTTTAACCCATTTGAAATTCAACGATTAAAAATTGCACT
CCAAAACCATCCCCACTTGATTTTTTAACGTTGAACAATAGAATCCCCAT
TGAGCTTTCAATATGAATTTTATCCCCATTGAGGGGAAACTTCCATCGGG
GTTGCGAGACAGGGGTGTGCGAAGTTGTGCTTGTGGGAGATCATTAACCC
TTTCAGTGCCGCTGTCGGCATTTACCAATAAGAGAGATCGCGACCTATTT
GCCAGAGGTTTTTTTTTAGTTTATTGAAAGTTCGATATTGAACTAGATTT
CATTAAAAAGCACCGGTAATCAATTAAAATATATTTTAAAGATGTTTTTC
ATAATTATACATATTTCAACTCAAAGTAAATACATATCACTTATATTTCT
GATATTTTTCAGAAAATAAAGCTAAATGTGATGGTCGCTCTTGTCGGCAT
ATGCCGACATCTGGCAAATAGGCAAATAGGTCGAACCTTAAAGAATTCGA
ACGAAAGTTAAAGGGTTAAGACGAACTGTTTCTACTTCACGACATATGAT
GCTTATCGGGGCAAAAAGTTTGGAAAAGTAACTCTGAGGACGACCCCAAT
CTTTCCACCGATTTATTTTAATTCCCGATCTTTATTTATCAATACAACAC
AATTTAGTAGACACGCCATCTGCCTCCTCATCTCAAATTTCTTCAAGAAA
AAAAATAAGTACTCGTCGGTTACACATTTTTTGTAAGCAACCCCAATTTT
CGGCTCAGGACTGGAGTTGCTAAGGATTTTCAGGATTTCAGCCAAAAAAG
TTGCTTATGGATTTTAAGCCAAAAATGCCAAAATTTTGGCTTTTTATGTA
AATTTATGTCCAAAATACCTCAAATTTGGTATTTAAATACCATTGGTACG
CATTTTAGGCCTCCTTTTTTAGATATTTTTGGTTGCTTTCCCGGTTCATA
CTATAAAAAAATGTGTACAAAAATTCGTCGGTAAACGTTTAGTCACAACA
TACATTTAGTAGATTTTTTGTCACTTTTCGCCGCCAAATTTTCTACTGAT
ATGGTATCTCTTTTTACATTTCCTTTCATTTTCTTTATAGAAGTGGAGGA
TAAATTTCAACAAATCTTAGCCAACTTAAGAGATCGTCTCGAAAACACTA
CTCCGAAAGGTATTGTATTACATTACGTAACATTACGTCCGGTACACATT
GTACGATTGTTTACACCTTCTATTCATGATATGCACCACTGGAAAAAGTC
TTCTGAGAACTTTTTAAAATCTTTCACCCAATACGTCACTTAAACAATAG
AAAAAGTGACGTATTGGGTGGGACAAAAACATTAAAGTTGCATAATTTCG
TGAAGTCATTGCAGTGGTGCATATCATGAATTGCTTATCAAGCATCATTA
AATTCTGAAAAATTAAAATTGACGGATCATGCCCGAAAACCACCTGAATG
CTTACGCACGCACTTTTTGCTGACATCGTCAGGCTGGACTATCATTTTGA
TTACCGGTAATTTGCATGGAGAGATGAGAGAGAATACAGCCCGACTTTTA
TCGGACTGTATTGTTTCGGACAACTGACGAGGCGGTTTATTTATCATTAA
TTTGCTTTACTTTCTACTACAGACTGTAATAATAAATTAGCCATACTTTA
ATGCATATGCATTTAAAGGGCAGAAACTTTCGTGATTTTTGCCCTTTTTT
GCATAAGTCTGTATGTTAAAGCATTTACCGTATCTACACATATAGTAGAT
TTACGGATTCTACATATCTACACATATGGTAGAAATAAGTGCGAGATTGG
CCTGATTTGTACAGTATGAAATACAACATTTATGTACGCGTTTTTAGCCA
ATCAGATTTCTTATATTTTTCATGTGGATGATAAGTTCGAATTATAGAAA
AATTCAATTAATAGAAGTTCAGATTAGCGTACCTTATTGGAACTAATTTT
CGCGGGAATAGATATTAACGTTTTTCGCGGTTTTTCGTCAAAAGCGCGAA
AATTTGAGCCCACGAAAAATTTTGAGAGTTAAAATCCGCGAAAATTAATT
CCCGCGAAATACAATTTTTTACAATTTTGTCGTATAATTTGAAAAACTCC
TCGGAAAATGAAAGAAATTTGTCCAAAAAAGTGCAAAACCGCGAAAATTG
AAATCCGCGAAATGCAATTTTCGGATATTTTTTTCGACCGTGAAAATTAG
TTCCAATAAGGTAAGTCCGCCGTATTGGTAACCTCATTCTTTCTTTTGAT
TATAGAACAATCTCCAAAGAAAGACGAGAAATCATCACTCACCATCAACC
CTTCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGGCTGTC
ATCACTGGACAAGAGGCTATCATACAAGTAGGTTCCAAACCTCTTCGTTC
AAATTATCCATTTTGTGTATTATAAATTCAATTCGATTTTCGGAGGGAAA
AATATTTTCATTGAATAAGGGTTTGAATAGTAGAGTGTATTGAATTGTAG
AGAGTCGTTTATGATAGTTTCTTGTTGACGGCGACGACGAATATTAGACG
TCGGTCGAATTAGAAAGGGTCAAATGTATTTGAAATTCGGAAAGTCGCCG
AATCCAATCCTCAGGTGGAAAGGGAAAAATGGCTCAACATTTGCTGCATT
ATTTCTTTTTGTAGGAGCTGAAAGAAGGCTATTCACAAGAAGCTTTTGAA
AGAGCATTGTTGGTAAGTCTCTTAACAGATCTCATTCACTTTCCATGCCC
CTTTGAAACCGTAATAAAA Coding sequence (CDS) from alignment at sc0000228_pilon:557631..560549- >XLOC_019685 ID=XLOC_019685|Name=XLOC_019685|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000228_pilon:557631..560549- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCTTTCTTTATGATTAAAACAGATGCCTTTCTTTATGATTAAAACAG
AAGTGGAGGATAAATTTCAACAAATCTTAGCCAACTTAAGAGATCGTCTC
GAAAACACTACTCCGAAAGAAGTGGAGGATAAATTTCAACAAATCTTAGC
CAACTTAAGAGATCGTCTCGAAAACACTACTCCGAAAGAACAATCTCCAA
AGAAAGACGAGAAATCATCACTCACCATCAACCCTTCTTCAACAGATGAA
TTGCAACAAAGGTTGGAACAATGCAAGGCTGTCATCACTGGACAAGAGGC
TATCATACAAAACAATCTCCAAAGAAAGACGAGAAATCATCACTCACCAT
CAACCCTTCTTCAACAGATGAATTGCAACAAAGGTTGGAACAATGCAAGG
CTGTCATCACTGGACAAGAGGCTATCATACAAGAGCTGAAAGAAGGCTAT
TCACAAGAAGCTTTTGAAAGAGCATTGTTGGTAAGTCTCTTAACAGATCT
CATTCACTTTCCATGCCCCTTTGAAACCGTAATAAAAGAGCTGAAAGAAG
GCTATTCACAAGAAGCTTTTGAAAGAGCATTGTTGGTAAGTCTCTTAACA
GATCTCATTCACTTTCCATGCCCCTTTGAAACCGTAATAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:557631..560549 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 217-321:106 |
| Aaloc | 97-216:513 |
| Aaloc | 28-93:1678 |
| Aaloc | 1-24:2920 |
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