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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000240_pilon:257578..259057+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019493 ID=XLOC_019493|Name=XLOC_019493|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1480bp|location=Sequence derived from alignment at sc0000240_pilon:257578..259057+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTCAAGTTGTTGTACACGAAAGGTGCAAGGTCAGCACAAGATGAAGT
CAGTGTTACCATCTTACCACCAAACACACCTCAGTTGGTTGTCTACTCAT
CACAACATCGAATCTCAAGAGCTTCTCCTGTTGCTTTCGTTGCTGAAGCC
TTTGGCACTTTCACTGAAACACTGTCTTATTCGTGGAAATGTTATGACAG
TCTTGGTAAGGAAATTTTCTTTGGACTTCAAATTTCTTAGGACTTCAAAT
TTCTTAGGACTTCAAATTTCTTAGGACTTCAAATTTCTTAGAACTTCAAA
TTTAAACTACTTGGCAAAGGAAACCTTTCACTGAAACACTGTTATATTCG
TGGAAATGTTATGACAGTCTAGGTTCGCAAGGTTTCTTTTAGGACTTCTC
AATTAAATAGTGACCTAGACGTCAAGTGAACATTCTAACATAACAAAGCT
TACTCTTTGAGATGGTGACAAAGAAAGAGAGTCGCTTGTCGATCCATGAG
TTTGGAATTTGTGTTGGTTGTATTTTTTCCTGTTAACAGATAATgttcga
tagatttaaaaatgaccttttcatGATTCTATTGCAGATCTGtccaagaa
aaacattttgccatCAACCATGACTCAATCAGGATCCATGACCATTGATC
AAGGTGTGACCAAGCATCACGTGCAACTTGCTGTTCTAAGGATCCCTGGC
CTCACTTTCTTAAAAGAGATTGACTTGGTTTGTGAATGCACTTTTGGTGA
AAATGTTGCAAGCGCTAGAGTGACCTACACGCGTATCTATTCGCCGTTTT
TGGTGCGTCAACCAAAATCTGGTGAAAGCCTTGCGACTGAATTCCGATTT
CACTTGGATTACGTTTTATCAGGATTCGGAAACTCATTGCTTTCGTACCG
GTTCGGGTATTACCCTGATACCGATCTGATTCCGGTTCAGTATCTCACTG
GATGGACCAGCCTGAATTATATTGACAAAGTAAGGTTACCTCTACTGGCT
GACCTTGAAGCTGGTGAATCAAAGAATCTGAAGATCTTTGCGCAAATCAG
AAATGATGTTGAAATGTTAGACTATGTAGACCACGAAGTTGTGCTCACCA
AACCTTCAAATCAAGATACAAACCTCCTCTCACTGGTCAGTAAATCAACG
AAAGAAATGCTTAAGTATAACTTGTACGAAGGTTGCGCTTTCTTGACGAT
GCAACTCATTTTACAACCTAACCTTAACTCCTTGGTGGTCAAAAAACGCC
GTAGAAGAGCGTTACCAGAAAGTGATCTTCAAACGGATGTTATTGAGTTG
ATTGATATCACCATGGCATCACCCTTTCAACCAGAGCTCATTGACCAAGC
TATCAATACCATCAATTATTTGATTCAAAGGTCGAACGGTCGTCTGCATG
AAGACATGACTTCCAAGATCAATGATTTTCTCTTACACGTGACGTCACAC
AGTGATTTTATGGACCTTTCTGGAGATATT Coding sequence (CDS) from alignment at sc0000240_pilon:257578..259057+ >XLOC_019493 ID=XLOC_019493|Name=XLOC_019493|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2196bp|location=Sequence derived from alignment at sc0000240_pilon:257578..259057+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTTTCAAGTTGTTGTACACGAAAGGTGCAAGGTCAGCACAAGATGAAGT
CAGTGTTACCATCTTACCACCAAACACACCTCAGTTGGTTGTCTACTCAT
CACAACATCGAATCTCAAGAGCTTCTCCTGTTGCTTTCGTTGCTGAAGCC
TTTGGCACTTTCACTGAAACACTGTCTTATTCGTGGAAATGTTATGACAG
TCTTGACTTTCAAGTTGTTGTACACGAAAGGTGCAAGGTCAGCACAAGAT
GAAGTCAGTGTTACCATCTTACCACCAAACACACCTCAGTTGGTTGTCTA
CTCATCACAACATCGAATCTCAAGAGCTTCTCCTGTTGCTTTCGTTGCTG
AAGCCTTTGGCACTTTCACTGAAACACTGTCTTATTCGTGGAAATGTTAT
GACAGTCTTGATCTGtccaagaaaaacattttgccatCAACCATGACTCA
ATCAGGATCCATGACCATTGATCAAGGTGTGACCAAGCATCACGTGCAAC
TTGCTGTTCTAAGGATCCCTGGCCTCACTTTCTTAAAAGAGATTGACTTG
GTTTGTGAATGCACTTTTGGTGAAAATGTTGCAAGCGCTAGAGTGACCTA
CACGCGTATCTATTCGCCGTTTTTGGTGCGTCAACCAAAATCTGGTGAAA
GCCTTGCGACTGAATTCCGATTTCACTTGGATTACGTTTTATCAGGATTC
GGAAACTCATTGCTTTCGTACCGGTTCGGGTATTACCCTGATACCGATCT
GATTCCGGTTCAGTATCTCACTGGATGGACCAGCCTGAATTATATTGACA
AAGTAAGGTTACCTCTACTGGCTGACCTTGAAGCTGGTGAATCAAAGAAT
CTGAAGATCTTTGCGCAAATCAGAAATGATGTTGAAATGTTAGACTATGT
AGACCACGAAGTTGTGCTCACCAAACCTTCAAATCAAGATACAAACCTCC
TCTCACTGGTCAGTAAATCAACGAAAGAAATGCTTAAGTATAACTTGTAC
GAAGGTTGCGCTTTCTTGACGATGCAACTCATTTTACAACCTAACCTTAA
CTCCTTGGTGGTCAAAAAACGCCGTAGAAGAGCGTTACCAGAAAGTGATC
TTCAAACGGATGTTATTGAGTTGATTGATATCACCATGGCATCACCCTTT
CAACCAGAGCTCATTGACCAAGCTATCAATACCATCAATTATTTGATTCA
AAGGTCGAACGGTCGTCTGCATGAAGACATGACTTCCAAGATCAATGATT
TTCTCTTACACGTGACGTCACACAGTGATTTTATGGACCTTTCTGGAGAT
ATTATCTGtccaagaaaaacattttgccatCAACCATGACTCAATCAGGA
TCCATGACCATTGATCAAGGTGTGACCAAGCATCACGTGCAACTTGCTGT
TCTAAGGATCCCTGGCCTCACTTTCTTAAAAGAGATTGACTTGGTTTGTG
AATGCACTTTTGGTGAAAATGTTGCAAGCGCTAGAGTGACCTACACGCGT
ATCTATTCGCCGTTTTTGGTGCGTCAACCAAAATCTGGTGAAAGCCTTGC
GACTGAATTCCGATTTCACTTGGATTACGTTTTATCAGGATTCGGAAACT
CATTGCTTTCGTACCGGTTCGGGTATTACCCTGATACCGATCTGATTCCG
GTTCAGTATCTCACTGGATGGACCAGCCTGAATTATATTGACAAAGTAAG
GTTACCTCTACTGGCTGACCTTGAAGCTGGTGAATCAAAGAATCTGAAGA
TCTTTGCGCAAATCAGAAATGATGTTGAAATGTTAGACTATGTAGACCAC
GAAGTTGTGCTCACCAAACCTTCAAATCAAGATACAAACCTCCTCTCACT
GGTCAGTAAATCAACGAAAGAAATGCTTAAGTATAACTTGTACGAAGGTT
GCGCTTTCTTGACGATGCAACTCATTTTACAACCTAACCTTAACTCCTTG
GTGGTCAAAAAACGCCGTAGAAGAGCGTTACCAGAAAGTGATCTTCAAAC
GGATGTTATTGAGTTGATTGATATCACCATGGCATCACCCTTTCAACCAG
AGCTCATTGACCAAGCTATCAATACCATCAATTATTTGATTCAAAGGTCG
AACGGTCGTCTGCATGAAGACATGACTTCCAAGATCAATGATTTTCTCTT
ACACGTGACGTCACACAGTGATTTTATGGACCTTTCTGGAGATATT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240_pilon | genome | sc0000240_pilon:257578..259057 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 208-1098:590 |
| Aaloc | 1-204:1 |
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