|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:157998..161164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019470 ID=XLOC_019470|Name=XLOC_019470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3167bp|location=Sequence derived from alignment at sc0000098_pilon:157998..161164- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCCTTTAGGATTTATCATGTAATCACAAAAATCAAACATGTGAG
ATCATTACAAACATTTCGAAAATTTCATTTTGATAGTATGAGCAACCAAG
GGACAACAACAGCTGTGAGTGAAGTAGCTACTCAAGACAGCTGGTGGTGG
TCATGGTTCAGCTGGAGACCTACCTCTTTCCAACTGTTAGAAGTTGCTGA
AAAGAAAATGTTAGAAGGTATGGCTGTTGCCATAGTTTAAGAAAACCATG
GCTGGTCTTTTCAGTTAATTGCTACCTCTGTTTCCTAGCTCTATAAGAGC
GTATTGCCAGTTTATTCTTGGTACAATAGATAGTTTTTTTGAATTTCTCT
TTTATTTTCCTTCACAAAAACTTTTTTGTTGTTTGATATTTTTTTAATCC
AGCCCTAATAGAACACTTTGAACTAATTTTGGACACATTTCAAATAATAC
TTTTTAACCAAAATTGAAATTATAAGAACTAAATTTACTGTCAGTTTAGC
CTGAAATTTTCACAGTATTATATTGAAGAATTTTTTGATTGATTTCTTTT
CTGTCTTTCTCAAAAGTATAACGGCCAAAAATAGCCATAAATAGACCTAA
TTCACAGGATTGTAGACTTAGGTAAGGATTATTGACAAAAAAATTAAGTT
AATACAAGAAAATTTTATTTCTTAGGTGTTCGTAGATCCTTCAAAAGTTA
CTTTGTCCCTATAAGTGATGACAACAAAATTCAAACCATTGAAACTGAAT
CAGAAGAGGACCGATTACCAGTTTTGCTACTCCATGGATTCGCTGCTGGT
GTTGGATTCTGGACTTTAAATTTGGATGAAATCTCACAAAAACAAAAAGT
ATATGCCATAGATTTACTTGGTTTTGGTCGAAGTTCTAGACCTAATTTTC
CATCTGACAGTGCTGATGCTGAGAAATTTTACGTCCAGTCTATAGAAGAA
TGGCGACAAAAAGCTGGATTAGAACAATTTGTCTTATTGGGACATAGTTT
TGGTGGCTATTTAGCTTGCTCTTACACCTTGGAACATCCAGAAAGAGTTC
GACATTTAATATTAGCAGATCCTTGGGGAATACCTGAAAAGCCCCCACCA
GGGGAAGAAGAATCCTTTAAGCTTCCACGTTGGGCAAAGGCTGCTGCTGC
CGTGTTAAGTTTGTTTAATCCTTTAGCTGCACTACGAGTTGCTGGTCCAT
GGGGTAAGTTTATCAGCCCTTAAATTTTTTTGGATTTTTTCTGTTATTTA
GAGATTGAATAAGATTTCAATGGAAGAGCTGCATTTTATGTCTTGTTTTT
ACTCACCCGCACTGCGTACTGTACCCTGGTTAAGGATAGATACTCAGAGT
TCAGATTAATATAATTCTGCTCATGAAAGTTTTTTTTATATATCCAAAAA
TTCTTTCCATCAGGACCAACTTTGATCAGTAAATTTCGTCCAGATTTACG
AAAGAAATATGAAGGAATATTTGGTGAAGACGACACGAGAGTGATGGAAT
ATATTTACCATTGTAATGCGCAATCCCCAAGGTATCTTTCTTTAGCTTTT
ATTAATCATTCTCCTGAAGTTTAAAATAACCAGAAATAACAGCACTGCCA
AAAGTGTTTAAGATAAAACATTATTAATGTTTGAAATCTGAAATCTTGGT
TCAATCTTCTATACAGGTATACAAGTTTTCTTTATTGTTTTATAGTGGTG
AGACTGCATTTCGCTCTTTATCCATACCATACGGATGGGCCAAATACCCA
ATGATTCATCGCGTTAAAGAAATTGACTCCAAAATACCAATGACTGTTTT
GTATGGATCAAGGTCTTGGATGGACTCTAGCTCAGGATACAACATCAAAT
ATCTGAGGGATAAAAGTTATGTCGATGTTCAAATCATAAAAGGTGCAGGA
CATCATATTTATGCGGACAGGCCGGATGAGTTTAATATGTGTGTGAATAA
TATTTGTGATAAAGTAACCGAACAAAGTGACTTGTCAAATATAGCTCAAC
ATTTTATGGCTGATGATATTGAAGCTCCTTCTAGCCAATCAGGAGAATCT
TGATTATACGTGCCTCATTTATGAATCATTGTGTGGACTGTATAATCTCA
ATTTACGCGTTGTCAAGTGTCAACGGTGTATATATTTTACGAATTATTAA
TTTTTAACAGATATTTAGAAATTTTCCTGTTGAGATGATTGGAATTTGGA
TGAGGGATGGTTATAGTATTTAAAGTTTTTTTTAAAATGAGACTCTAATG
TGCTCATTCTCTTTTCGTCATGTTCCAAGAAATTTCCAACAATATTTTAT
TCAGTATTGGCAGACTTCTTAGAATTAGGAGAGGCTCGGTTCTCACCAAA
CGTTTTATCGAGTGGAGCTTTCCGTGGTAGTTTGCAGAAGCCCTGTCTTA
GTACCTATCACTACCGAGTTTATGTATCGGAGGATATCGAGGGCGACGGT
AAGTGAAATGATACAAAACAAAGTCGATAGTTCATGTACGGCTCTATATC
GCCTTTGCTCACCTAAACAGACGACGGTATTTTGGTGTTTTTACCGTCTT
CGAGCAAAGTGGACGGTGATTTTGGAGATATGTCAATTATGCTTTATACC
GTTCCCATCGATTTATCTCGAATACATAAACTCGCTACTATCAGGATCCT
CCACCAGCTCTGATTATTTTTCTCTTTAAATTATTTGGTTTTGTATTGTA
ATATTGAATGAAATTTTATATTATTTTATGTAGATACCAGGACTTGTTTG
CATCAATTTTCTCCTCGAATTTTTAGAATTTTGACTTGTATAGAAAGGCT
TACTATCCAATAACATTTGCCTTATTTGTTCCTAGGTCAATAAGATTACG
GGTTGATTTACCAAACTTTGACATTGGATAGTTCATAAAAAAATGAATTT
CTTGGATTACGAACTTAAAGTCCCTTTTTAAATTAAAAGGTTGTTTATAA
CATTTAAATGAAAACATGGCGAACTTTCATTGAAATCCAATTTGAAATTT
CAACATTTATTTTTTCATTTATTTTAGGAAATATAAAACTGAAAACAAAA
AAGAACGAAAAAGAAACATCAAATGAACTAATAAAGAAAGAAACTACACA
AATAAAGAAAGTCTTCAACAAACTTCAAATACACATTCAGCATGACAGAA
GCAAAGAGACTCGATGA Coding sequence (CDS) from alignment at sc0000098_pilon:157998..161164- >XLOC_019470 ID=XLOC_019470|Name=XLOC_019470|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2400bp|location=Sequence derived from alignment at sc0000098_pilon:157998..161164- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTTCCTTTAGGATTTATCATGTAATCACAAAAATCAAACATGTGAG
ATCATTACAAACATTTCGAAAATTTCATTTTGATAGTATGAGCAACCAAG
GGACAACAACAGCTGTGAGTGAAGTAGCTACTCAAGACAGCTGGTGGTGG
TCATGGTTCAGCTGGAGACCTACCTCTTTCCAACTGTTAGAAGTTGCTGA
AAAGAAAATGTTAGAAGATGTTTTCCTTTAGGATTTATCATGTAATCACA
AAAATCAAACATGTGAGATCATTACAAACATTTCGAAAATTTCATTTTGA
TAGTATGAGCAACCAAGGGACAACAACAGCTGTGAGTGAAGTAGCTACTC
AAGACAGCTGGTGGTGGTCATGGTTCAGCTGGAGACCTACCTCTTTCCAA
CTGTTAGAAGTTGCTGAAAAGAAAATGTTAGAAGGTGTTCGTAGATCCTT
CAAAAGTTACTTTGTCCCTATAAGTGATGACAACAAAATTCAAACCATTG
AAACTGAATCAGAAGAGGACCGATTACCAGTTTTGCTACTCCATGGATTC
GCTGCTGGTGTTGGATTCTGGACTTTAAATTTGGATGAAATCTCACAAAA
ACAAAAAGTATATGCCATAGATTTACTTGGTTTTGGTCGAAGTTCTAGAC
CTAATTTTCCATCTGACAGTGCTGATGCTGAGAAATTTTACGTCCAGTCT
ATAGAAGAATGGCGACAAAAAGCTGGATTAGAACAATTTGTCTTATTGGG
ACATAGTTTTGGTGGCTATTTAGCTTGCTCTTACACCTTGGAACATCCAG
AAAGAGTTCGACATTTAATATTAGCAGATCCTTGGGGAATACCTGAAAAG
CCCCCACCAGGGGAAGAAGAATCCTTTAAGCTTCCACGTTGGGCAAAGGC
TGCTGCTGCCGTGTTAAGTTTGTTTAATCCTTTAGCTGCACTACGAGTTG
CTGGTCCATGGGGTGTTCGTAGATCCTTCAAAAGTTACTTTGTCCCTATA
AGTGATGACAACAAAATTCAAACCATTGAAACTGAATCAGAAGAGGACCG
ATTACCAGTTTTGCTACTCCATGGATTCGCTGCTGGTGTTGGATTCTGGA
CTTTAAATTTGGATGAAATCTCACAAAAACAAAAAGTATATGCCATAGAT
TTACTTGGTTTTGGTCGAAGTTCTAGACCTAATTTTCCATCTGACAGTGC
TGATGCTGAGAAATTTTACGTCCAGTCTATAGAAGAATGGCGACAAAAAG
CTGGATTAGAACAATTTGTCTTATTGGGACATAGTTTTGGTGGCTATTTA
GCTTGCTCTTACACCTTGGAACATCCAGAAAGAGTTCGACATTTAATATT
AGCAGATCCTTGGGGAATACCTGAAAAGCCCCCACCAGGGGAAGAAGAAT
CCTTTAAGCTTCCACGTTGGGCAAAGGCTGCTGCTGCCGTGTTAAGTTTG
TTTAATCCTTTAGCTGCACTACGAGTTGCTGGTCCATGGGGACCAACTTT
GATCAGTAAATTTCGTCCAGATTTACGAAAGAAATATGAAGGAATATTTG
GTGAAGACGACACGAGAGTGATGGAATATATTTACCATTGTAATGCGCAA
TCCCCAAGGACCAACTTTGATCAGTAAATTTCGTCCAGATTTACGAAAGA
AATATGAAGGAATATTTGGTGAAGACGACACGAGAGTGATGGAATATATT
TACCATTGTAATGCGCAATCCCCAAGTGGTGAGACTGCATTTCGCTCTTT
ATCCATACCATACGGATGGGCCAAATACCCAATGATTCATCGCGTTAAAG
AAATTGACTCCAAAATACCAATGACTGTTTTGTATGGATCAAGGTCTTGG
ATGGACTCTAGCTCAGGATACAACATCAAATATCTGAGGGATAAAAGTTA
TGTCGATGTTCAAATCATAAAAGTGGTGAGACTGCATTTCGCTCTTTATC
CATACCATACGGATGGGCCAAATACCCAATGATTCATCGCGTTAAAGAAA
TTGACTCCAAAATACCAATGACTGTTTTGTATGGATCAAGGTCTTGGATG
GACTCTAGCTCAGGATACAACATCAAATATCTGAGGGATAAAAGTTATGT
CGATGTTCAAATCATAAAAGGAAATATAAAACTGAAAACAAAAAAGAACG
AAAAAGAAACATCAAATGAACTAATAAAGAAAGAAACTACACAAATAAAG
AAAGTCTTCAACAAACTTCAAATACACATTCAGCATGACAGAAGCAAAGA
GACTCGATGAGAAATATAAAACTGAAAACAAAAAAGAACGAAAAAGAAAC
ATCAAATGAACTAATAAAGAAAGAAACTACACAAATAAAGAAAGTCTTCA
ACAAACTTCAAATACACATTCAGCATGACAGAAGCAAAGAGACTCGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:157998..161164 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1063-1200:139 |
| Aaloc | 865-1059:1472 |
| Aaloc | 748-861:1753 |
| Aaloc | 220-744:2491 |
| Aaloc | 1-216:3168 |
|
