XLOC_019467 (mRNA) -

Overview
NameXLOC_019467
Unique NameXLOC_019467
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000098_pilon:66778..68400-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019467 ID=XLOC_019467|Name=XLOC_019467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1623bp|location=Sequence derived from alignment at sc0000098_pilon:66778..68400- (Clytia hemisphaerica_ch_hm2_pilon)
TCACTCTCGATTATGCATATCTTCAAATATGTAATACTAAGTATGTAAAT GTTTAGTTTATCGAATTTATCGAAGCACAGTGTCCAGTATGAAAAACTTA GATTAAAATATGTACCAGACACATTTTGGTATTTTGTCCAGTGTGAATAT TCTATACAGCATTTTGGTGTGACCGTAGGGTTTCGTAAACCTTGATTCGG GTGTATTTTAATAACATAAAAAATAATCTAAATTGTATTTATGTTTCTAG GACGTATGATATGTTTGTGGGTTTTTAGTAGTTTGATAATGACAGAAGTT TCATTATAAAATTTAAAATATTATATTTCTCGAAAAAAATTACATACGTA ATGTAAAACATGAACTTCGAAATTCTGATGACGTCAGAAATTCAAAGTTT CGGTTTTTAACTGGCGATCAGACAACGTTTTCAAAACAGTTTGTATCAAT GTCTAATTAAAAAAAAAAAAAATACGAAACACAATACTGTTGGAGTATTA AAAATCTTGCTCTAAAAATAAATTTCTTTGAACCATAAAATGTACGTAGA GTAGCTACATGTAAAAAAGAAATTGTAGATTGCATTGATTAAAATAAAAA TTCTGTTATGTATCACAATGCCAAAAATATAATTTGCGTGGCTTTGTAAA CCACAATGTGTTAAGGGCAACAAAATCCAAAGTTTTCACCATTTTGATCT AGTCATAATCACTGACCTCATTTTAGCTTCGTCAGGACGACCTTTTTCTT CTCGCTTTCAAACTTACGGCAGAATGTTTTTTTCTGAAAATTCTCCGTGG CTTTCTAGTTTGAATTTTCTCAAACTAGCGACGCAACTTTTCCCAGGAAT GACAACAGTCCCTCAAAATTTCAAAGAAATGAAATTCCGTGCGGGGCGGG TACAGTCTAGTCCCAATTACGTACAGATTGAATCTGCCAAAGAGTTTTTT CTATAGTATTGTGAAAAATTTTATTCGGTCAAAATAGAACAAAAAACAAA AATTTTGAAAAGTTGCTTGCTATTTCAATCAAAGTATTTTTCAATTTCTT TCAGGTCAGCGCATAACACAACCCAACGACACGATGCCGGACTTCTTATC AACACTAACAACAGATATAACACTAACAACAGACACGCTACACACCAGCG CTGTTGATCTCATCAGCTCCATACATGGCCATCAGCGCAGAGCTGAGCGA GCCATTGAGAAGAAAGATCTGCAATCGGCCGTCTTGCATGGTACACGAGA ACGCCAAGAGAGATTGAAGAATGGAATAACACAAATCCGCTACAAATATA CTTTTGCGGATATCGTGTACATTACAGATGTTACAAGTACCCATGAGATC ACAAGTTGGGTCTTACCGCTACCTCTGGATTCAGTCCGCGTTTCTGATAA CGATCAACACCAATACAACGCCGCAGTATCGCGCATTGCTCAAGACCCGA AGATCATCACATCGCATTCAGTGTTCGTGATCGACTGCAGTGGATCAATG AAATCAGCAGACGTTGAAGCACATCGCTGTCGAGCAGATGCCGTCAGTTA TTCAGTGGCCAGTGAATTCATCGCAAAGCGACTTCACAACCCATCTTTTG GTGTGACACCTTATAACGTGGTA

Coding sequence (CDS) from alignment at sc0000098_pilon:66778..68400-

>XLOC_019467 ID=XLOC_019467|Name=XLOC_019467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1218bp|location=Sequence derived from alignment at sc0000098_pilon:66778..68400- (Clytia hemisphaerica_ch_hm2_pilon)
TCACTCTCGATTATGCATATCTTCAAATATGTAATACTAATCACTCTCGA
TTATGCATATCTTCAAATATGTAATACTAAGTCAGCGCATAACACAACCC
AACGACACGATGCCGGACTTCTTATCAACACTAACAACAGATATAACACT
AACAACAGACACGCTACACACCAGCGCTGTTGATCTCATCAGCTCCATAC
ATGGCCATCAGCGCAGAGCTGAGCGAGCCATTGAGAAGAAAGATCTGCAA
TCGGCCGTCTTGCATGGTACACGAGAACGCCAAGAGAGATTGAAGAATGG
AATAACACAAATCCGCTACAAATATACTTTTGCGGATATCGTGTACATTA
CAGATGTTACAAGTACCCATGAGATCACAAGTTGGGTCTTACCGCTACCT
CTGGATTCAGTCCGCGTTTCTGATAACGATCAACACCAATACAACGCCGC
AGTATCGCGCATTGCTCAAGACCCGAAGATCATCACATCGCATTCAGTGT
TCGTGATCGACTGCAGTGGATCAATGAAATCAGCAGACGTTGAAGCACAT
CGCTGTCGAGCAGATGCCGTCAGTTATTCAGTGGCCAGTGAATTCATCGC
AAAGCGACTTCACAACCCATCTTTTGGTGTGACACCTTATAACGTGGTAG
TCAGCGCATAACACAACCCAACGACACGATGCCGGACTTCTTATCAACAC
TAACAACAGATATAACACTAACAACAGACACGCTACACACCAGCGCTGTT
GATCTCATCAGCTCCATACATGGCCATCAGCGCAGAGCTGAGCGAGCCAT
TGAGAAGAAAGATCTGCAATCGGCCGTCTTGCATGGTACACGAGAACGCC
AAGAGAGATTGAAGAATGGAATAACACAAATCCGCTACAAATATACTTTT
GCGGATATCGTGTACATTACAGATGTTACAAGTACCCATGAGATCACAAG
TTGGGTCTTACCGCTACCTCTGGATTCAGTCCGCGTTTCTGATAACGATC
AACACCAATACAACGCCGCAGTATCGCGCATTGCTCAAGACCCGAAGATC
ATCACATCGCATTCAGTGTTCGTGATCGACTGCAGTGGATCAATGAAATC
AGCAGACGTTGAAGCACATCGCTGTCGAGCAGATGCCGTCAGTTATTCAG
TGGCCAGTGAATTCATCGCAAAGCGACTTCACAACCCATCTTTTGGTGTG
ACACCTTATAACGTGGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_019467XLOC_019467-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000098_pilongenomesc0000098_pilon:66778..68400 -
Properties
Property NameValue
Aaloc43-609:568
Aaloc1-39:1624