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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:140758..146675+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019466 ID=XLOC_019466|Name=XLOC_019466|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5918bp|location=Sequence derived from alignment at sc0000098_pilon:140758..146675+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGCACCAAAACATATACCTACAGAACATAAAGATATCATTCATGA
TGTTTCTTTTGATTACTATGGAAAACGGATGGCCACTTGTTCCTCAGACC
ACACTGTGAAGGTACTAAGTGTTcccttcaaaagatttttttgtttttcc
taaATATGATCTTCTTATGTGAAGTGCAAAAGGAGTCTCGTCTTTTGCCA
TTCAATTTGTAGTTCTCTTCGCATTGTTTTATCTCATCTCTCATAGTATA
ATTTGTTCAAAACTTTGTATTGTGCTTTTAAGATCATTTGTACTTTCAAA
AGATAAATATTCCCGAATTTCCATACGTCTTCCGTAATTTCAGCGTGTTG
TTTGAGTGGTAGGTAATCAAAgcacttgatatttttcatgaCAAAAAGCG
AGAACACTTTAGGGTGCCGGCATGCCAAGAAGACTTGGATTGTTTTAAAG
GAAGGTCAGTACCctttctgcattttgacctcttttctattctgattttg
tctttttctttcactctattctttctCCGTAGATTTGGGACTTGACTGAA
AATGGACAGTGGAAATGTACTGCAGATTGGAAGGTTTGATCTATTTACTT
AAATAAATAGCGaataggaagaaattttcaaattatcaaaGCATAGTTTt
ctaagtctgcgaccgcagtcggaggcggcCCGAAGGCTCAACTTttgata
gctgtctacccgaaggtaggggagggcgccactctttctctctggattgt
tccacttacccttgacccttctcttaattgctgaacaTCATCAGAGAGGC
ATCGAGTACTACTTTGGGAATTTTTGGTATGTCCtggctggggattgaac
ccacaaccttgcgcctGATGCTCtactaccactgcactacggtcgctata
GTTTCATACTTAGTTAATCTAGACGagaattcttatttttctttgtagAC
ACATTCAGGTTCAGTATGGAAAGTGACCTGGGCACATCCAGAGTTTGGTC
AAGTGATCGCTACATGTTCTTTTGATCGAACTGCTGTCGTTTGGGAAGAG
CAAGGTAGGTTTTGTTGTATaacttttaatgattttatcATTGCTGCCTT
ATCCACTGATCAGCCATTAAAGCGCGAGGCTGGGTTAGTGTTCTATGTTG
TCAATTTTTAAAGTCGCTGCATAGATTTCCATGCATTGATTTAAAATGCA
TTTCGATAAAAGTAAAAGATATCCcgaatttttcaatcaattgaaGCAcc
gtatttttattttgttctttttttcagtcGGAGAAATCAGTTTCCCTCTC
CAATCGAAAAGTAAATGGGTAAGAACAATACACAGAAAATGAAGTACcta
atcggccctttttacgccggccctaatttaacgccggccccttttacgcc
ggcccttattccgccacagcctaattttgggcttacgccaattagggccg
taaataacgccaaaacttgtaaaaatcgctaATCAGGCTTCAAAGTAGTA
cgaactaaaatttacattaaaatgtcatctttcagtattaaactgttgaa
aattccattgaaaataattgattttcgtgaagttttggatatagagtaaa
aaaatggatagttttcatcctttaatcatgcctaaaatcctataaattga
caaaaaatggtcaaaaattaacgccgcctttaggtaaaaattgctaaatt
ttggccctttttgcactggcccttttaacgccggccctaattacgccacg
agcccaaaaataacgccaataagggccggcgtaaaaagggccgataaggt
actctaagctctagtttagacggccgactttctgccctgcctattctaat
tgttagggTAGGCAGAAAGAGGGCACAAAGCTGGtatttaaaatctttgc
ttgaaaagggttgaaagaagacattgcattgacgtcaaaagagggcaatg
cattgactttagacagcccactttatgtcCGCaggaataggcagggcaaa
agtGGGCCTCCTAAGCTAGAGCTACCATTCCGAAGTGCGCAACGAACTTT
TTCTTTTCGATTTTCTGCAAGTATCCAATCTatatattagtttttttttt
aaatcagaccACTCGGACTAGCGGACAAAATCTTCTGCACTCGATTCCCT
TTCCGCTGATTAGAGCTCCCGCTCAAATACCGTTTAAACGTCTCGTGTTT
CAGGTACAACGAGCATCATTGGTGGATAGCAGTAACTCAGTAACAGACAT
CAAATTTGCTCCCAAAGATCTAGGCCTCTTATTGGTAAGCTATCGGATAC
GTTATAGACTTGAAAAGTAACAATTTTTCAAGGTCTATAAACgaggaaaa
ttttttgtcaCAATAATAtgactagtgtatatgtataagaattgcgaagc
aatccaggcaagtcactcgattcgcaagttgcaagcaaaatatttataag
gGTCACGCACTAGAAATTGCGATTTTAAAATAGATTCGTAATCAATTCGT
AAATACAAACCCTGCGAAACCCCGACAACAGCTCAGGTTCAGGAAGACCG
GGCCCCTTTAGAATGATGTTTTCGGTACCGTAGAAAACGCACATCAAGTT
TTCCTTGGCGCTCCCCTaggtatatagaatttaaagctacatgcacacga
tagcaaaactgcttcgctcatgtatattcgcttcgcaataaaaGATGTAC
CATATATGAGGAGACCATCTGAAGAAACAAACTTCATATTTTCAGGCGAT
GTGTTATAAAGACGGAGTTTTCCGAATCTATGAAGCTACTGACGTCATGA
ACCTCAGCCATTGGTCGGTACAGGTCAGTTTAAATGTTTCCTATTTTCAT
TCCACTGTTTATCCTGCTCACTGTTTTACTGGATAATAACTTGTGTCAtt
tggggccgtccacatagtacgtacgtacgcactaaggggggggagggggt
attctcaaaagcgtatgcttgcgtacagggggaggggaggggtcaaagga
aaatgtacgtacgcagagaaaatttaTTCATAGCCCTTTTTCGATTGTta
ttttgtcgacttttacgcttgttatacgcatcaaggaaaagaaaaagttt
cttgataaacattgagtttcatgtatgaaataaaggtccgaaccaaacta
TTTGAATTCaagattttcttcaaccgagggggggggggcgtgaatgaaaa
agtacatacTTACCAGAgggggggtatagccatttgcgtacgcttgcgta
caggggggagggggtactcgattttcgacattttagtgcgtacgtactat
gtggacgacCCCTTTCATCGATTGCATTAAAAAGCCTCACAACCCCCAct
tcttattttcattattgGGAAATCGCCTGAAGAAGCCTCACAACCCCCAC
TTCTACTTACTTTCATTACTTCATACTTTCAGCACGTCGTCGAATGTAAA
TTGGCCAGTGCAAGTTGTATATCATGGAATCCCTCAAGGTCAGTATGTCA
ATTAATTCGTACGTTAGAACAATTCTGGGGAAATTTTGATGGCCTATATT
AAAGGTAAATATTTTATTCTGGGATGTCACCTTCAAAGAATTGCTTCAAA
AGCTTGTCCTATATTCAAGCAACTCAATCGGCGTattaaagtttcaattt
tcttatctCTTCATTTAGATCCATTGCACCGATGTTAGCAGTAGGGAGCG
ACGACCCGAGCACAAATGTTGGTGGAAAAGTCGAAATTCATGTACTAAAC
ACTAATACAAGGTTGAGAATCTATTCACCACACCttagaaaaacttaaaa
tagaCTCTGCGGATCCTTTTTTAATCTGAGAtttttttCGCGCTGAAATC
TACTAAGGATAGGTAATGGCCATTTCATTAtgtgtgtgtatgtgtgtCAT
TCAATTATTAAATTTAtctcttttttcagaaaatggggCAAAATCGCAAC
GCTAATGGGTGTGACGGACGCTGTACATGATATCTCGTTTGCACCTAATG
TGGGAAGGTACTTTTTGATGTtctatgtctttcttttttttcttaatgCA
TTATTGTAACCAGTCTGGGTACCTGAAGTGATTTGATATTTTACGACAGA
AAAGATTTTCCTAATGCAATGTATGCTTTAGtatatagactggagtcgtt
tataatgcatgtagtactaataataccaatactaataataatacgggatt
tagtttgtataaacgactggaagaatccggtgttccagccttatagatac
aggggctagctacgcagaaacttgcgtagcgagaaaacaatttatcaagc
aacaacaaactctcaaaacgaaatcaactcaaatgaaaaactttcaatac
acaaatccacacatcttttttttctcaagaattattttgagcaggaaaaa
attataattacaatattgacacttttcttttgtttcgagttagtgcacaa
aggtttctagacgactaaaattgttccctttattactttttgctttattt
ctactatgtataaattagttgtctagcttgctagactatttAGTATATGA
AAATCCATTCATCTTCCGAATTTTTCAGGTCACGTCATTTGTTAGCCATT
GCCTCCAAAGAGATTTTCATTGTTGCCATCAAACCAATTCGGTAAGTTTA
CTTTCGATTTAAAATTGGGAGAAAAGCAAACCTTTCATCCGTGCTCCAGG
TCAACATGAATCGAAAGGAAAGTTTCATTTAACCATCATTAACTCAAAAC
TAATTTCGCAATTAATTTGACAAATTGACATGAGAAAAAACTCTTCTATT
CATTCAATACTCGGATGTCCGAATTAACTGTATCATGAAATAAGTAATAA
TCTTAATATTCCATTTTGTTTGACAGAACACCACCAGAAAACACGGCAAC
ACAAGCAATCACTGACAAACCTGACATTCAAATATTGGCCACACTCTCTG
ATCAAGACTCACAGGTATTTCCAAGCATCACGTTTAACTTGTCACAACTG
CTCCCTTTTCCTACTCCAAAACGTTCCGAATCCAATATGAACATAATACC
GAACCCATACCGAAGCGATGCTAAACCGTAACGCCCGAACGTGGCCTTAG
AATTTAACATTAATCACCTTTACTTTCTCTTTAGGATCGCTTCAATAGTA
CGACACAAGTATGGCGTGTAGAATGGAATATTACTGGAACCATCCTGGCT
TCAACAGGCGATGATGGCAGAGTTCGACTGTGGAAAGGTaaaaaaaTGTC
TCTCATTGACGGTGACTGTTGTAATGCAGCTCCCCTCTGTTGAACTTTGC
AAAGGCAAAGGAATTCATTCGAAGGATACCTCAGTAAATTATAAGGACAA
TTATGCAACTTTGTTTCCAGCCATATTTCATCTTTAACAAACTCTAGTCC
TTTATCATAATTTGCACTGATGTTCTCATCgttataataaaaatgaattc
gCCTATCTACAAATGTTGTGGCTTTTTATACACTCTCATAATTTCCCTAG
GCAATACGCAAATAGTAATTAGTAATAAAACGACGTAGCAATATGTTCTA
TAAATTCTCTAGGCAATATAGTCGTATCAGTAAacaaatttctataaaat
gaaattctcaaaGGAAACGCAATAACACCCTCTTTATAAAGTGTACTGTA
TGAACTCTTTGAGCTCATTCGTTCGCTTAATGCATTAATCTACCACGCAA
AAAGAATCAGCGTAAAATTTATTCTATTTGGACTGGTTATCTCCACGtaa
acttttcttcaaatttataTCCCATTTTTAGGAAACTACATGGACACGTG
GAAATGTTTACCTAGTTGGCGTGGTGACGGTACGACCACATCCATTCTCA
CACGACCCGCGTCAAATTCGATGAGTCAAGCGCAGAATATTCTTGATATG
TCAACACAGAAGAGTTAC Coding sequence (CDS) from alignment at sc0000098_pilon:140758..146675+ >XLOC_019466 ID=XLOC_019466|Name=XLOC_019466|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2172bp|location=Sequence derived from alignment at sc0000098_pilon:140758..146675+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGCACCAAAACATATACCTACAGAACATAAAGATATCATTCATGA
TGTTTCTTTTGATTACTATGGAAAACGGATGGCCACTTGTTCCTCAGACC
ACACTGTGAAGATGGAGGCACCAAAACATATACCTACAGAACATAAAGAT
ATCATTCATGATGTTTCTTTTGATTACTATGGAAAACGGATGGCCACTTG
TTCCTCAGACCACACTGTGAAGATTTGGGACTTGACTGAAAATGGACAGT
GGAAATGTACTGCAGATTGGAAGATTTGGGACTTGACTGAAAATGGACAG
TGGAAATGTACTGCAGATTGGAAGACACATTCAGGTTCAGTATGGAAAGT
GACCTGGGCACATCCAGAGTTTGGTCAAGTGATCGCTACATGTTCTTTTG
ATCGAACTGCTGTCGTTTGGGAAGAGCAAGACACATTCAGGTTCAGTATG
GAAAGTGACCTGGGCACATCCAGAGTTTGGTCAAGTGATCGCTACATGTT
CTTTTGATCGAACTGCTGTCGTTTGGGAAGAGCAAGtcGGAGAAATCAGT
TTCCCTCTCCAATCGAAAAGTAAATGGtcGGAGAAATCAGTTTCCCTCTC
CAATCGAAAAGTAAATGGGTACAACGAGCATCATTGGTGGATAGCAGTAA
CTCAGTAACAGACATCAAATTTGCTCCCAAAGATCTAGGCCTCTTATTGG
TACAACGAGCATCATTGGTGGATAGCAGTAACTCAGTAACAGACATCAAA
TTTGCTCCCAAAGATCTAGGCCTCTTATTGGCGATGTGTTATAAAGACGG
AGTTTTCCGAATCTATGAAGCTACTGACGTCATGAACCTCAGCCATTGGT
CGGTACAGGCGATGTGTTATAAAGACGGAGTTTTCCGAATCTATGAAGCT
ACTGACGTCATGAACCTCAGCCATTGGTCGGTACAGCACGTCGTCGAATG
TAAATTGGCCAGTGCAAGTTGTATATCATGGAATCCCTCAAGCACGTCGT
CGAATGTAAATTGGCCAGTGCAAGTTGTATATCATGGAATCCCTCAAGAT
CCATTGCACCGATGTTAGCAGTAGGGAGCGACGACCCGAGCACAAATGTT
GGTGGAAAAGTCGAAATTCATGTACTAAACACTAATACAAGATCCATTGC
ACCGATGTTAGCAGTAGGGAGCGACGACCCGAGCACAAATGTTGGTGGAA
AAGTCGAAATTCATGTACTAAACACTAATACAAGaaaatggggCAAAATC
GCAACGCTAATGGGTGTGACGGACGCTGTACATGATATCTCGTTTGCACC
TAATGTGGGAAGaaaatggggCAAAATCGCAACGCTAATGGGTGTGACGG
ACGCTGTACATGATATCTCGTTTGCACCTAATGTGGGAAGGTCACGTCAT
TTGTTAGCCATTGCCTCCAAAGAGATTTTCATTGTTGCCATCAAACCAAT
TCGGTCACGTCATTTGTTAGCCATTGCCTCCAAAGAGATTTTCATTGTTG
CCATCAAACCAATTCGAACACCACCAGAAAACACGGCAACACAAGCAATC
ACTGACAAACCTGACATTCAAATATTGGCCACACTCTCTGATCAAGACTC
ACAGAACACCACCAGAAAACACGGCAACACAAGCAATCACTGACAAACCT
GACATTCAAATATTGGCCACACTCTCTGATCAAGACTCACAGGATCGCTT
CAATAGTACGACACAAGTATGGCGTGTAGAATGGAATATTACTGGAACCA
TCCTGGCTTCAACAGGCGATGATGGCAGAGTTCGACTGTGGAAAGGATCG
CTTCAATAGTACGACACAAGTATGGCGTGTAGAATGGAATATTACTGGAA
CCATCCTGGCTTCAACAGGCGATGATGGCAGAGTTCGACTGTGGAAAGGA
AACTACATGGACACGTGGAAATGTTTACCTAGTTGGCGTGGTGACGGTAC
GACCACATCCATTCTCACACGACCCGCGTCAAATTCGATGAGTCAAGCGC
AGAATATTCTTGATATGTCAACACAGAAGAGTTACGAAACTACATGGACA
CGTGGAAATGTTTACCTAGTTGGCGTGGTGACGGTACGACCACATCCATT
CTCACACGACCCGCGTCAAATTCGATGAGTCAAGCGCAGAATATTCTTGA
TATGTCAACACAGAAGAGTTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:140758..146675 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1086:5784 |
| Aaloc | 847-948:5135 |
| Aaloc | 760-846:4878 |
| Aaloc | 697-756:4580 |
| Aaloc | 619-693:3931 |
| Aaloc | 526-615:3670 |
| Aaloc | 469-522:3433 |
| Aaloc | 391-468:2746 |
| Aaloc | 310-390:2204 |
| Aaloc | 271-309:1280 |
| Aaloc | 163-267:949 |
| Aaloc | 112-162:533 |
| Aaloc | 1-111:1 |
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