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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:135023..138276+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019465 ID=XLOC_019465|Name=XLOC_019465|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3254bp|location=Sequence derived from alignment at sc0000098_pilon:135023..138276+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAAAACAAGTAGACTTTTAGGAAAACTAGCACAAGCATCTACTAC
AACAACAAGCGTACGAGAAATGAATAAATTTCCACCCGTTACAACGCCCA
TGTTGCCACCCAAATCTTTTGATGGGAAAGTTGCCCTCATTACGGGCGGT
GGTACTGGTTTGGGAAAAGGAATGGCTACAATGTTGTCCAGATTAGGTGC
TACCGTTGCAATTGCGGCTAGGTATGTATGCATGTATAGCCAATTCGCTA
TCACCTGAGATTAAATACTTTTAAAGAAACACTTGCTCTCACAAATTTCA
TTGTGAAATACTTATAGGTTTAACTTAGGCTTAACTTAGGACCACTTCAG
GTTTCTGcaggccaaatatctcaaaccatctgattatccctttaatttat
atattgtattatagatgtttaaaatatttcaattttcttacaGACGGTTA
CCAGTATTGGAGGCAACTGCAAACGAAATCATGAACGAAACTGGATCTAC
AGTATAGTTCTTGACTTATTCTAAACTTAACTTATAAACTTATAAACTCC
AATCACATTTTAGCAGCTGATGATGTTCTTAAGTGAaacttttcatattt
tgttcTTCACCATGTTATATGTTAATGAGGCTATCTTAAAAACTTCTCCT
TAGGCTactaagaaaatataaaaattacaagaaggttcattttcttttgt
cataTTCGACTTCACTGCTCACAAAATGAGGCTTTTAGTAAAAAGATAAT
AACAAGTTTGAAATCTTAAGTCTTAGGTCCTAGGTCATTTGAACAATCCC
ACTCAGTgttcataaaaatttttaacCTCCTCATACACTAGGTTCTTCCC
ATCAAGATGGACGTACGTGATCCAGAAGCTGTCAAAGCAGCTATCGATCA
CCTGGAACAAGCTCATGGTCTTCCCAACATTGTCATCAACAATGCAGCTG
GCAACTTCATCTCACCTTTTGAACGTCTTTCACCAAACGCCTTCAAAACT
ATTGTGGATATCGTATTGAATGGAACAGCTAATGTGACTTTAGATGTTGG
CAAACGATTGATCAAGGCTGGACAAGGTAACGCGCCTTTAAGCTAAGATG
ACTTGAGATTCATTATTAAAAATTCAAGTTTAAGGAAATGGTCTATTCAA
GATTATTTATTATTGAGCAGGACTGTGATTTAGGCTTTGACTTGAGACTT
TAAAACCAAATTAATTCCCTGTAGATGAAAGGGAGTTTCAGCAAGAGACT
ATCTACCAACGTGAAATAGCTTTCCCTGTATACAGACATACTAAAATCCT
TGTCTTGACAAACCTTTTGTGTTGTTAACTATTATAACCTAACTTAACTT
AATTTGCTTATTGGAAAACTAGATGATACCATTGTTGAAATAGAAAGACT
TCTTATAACATAATAGCATAAcataaatatttaattttgttttaaacaaa
aggtGAGCTTTTGACTAGTTTCTATAAACGTGATTTTCACTCCAGGTGCG
AATTTTTTGGCCATCACAACTTGGTATGCAGAGATGGGTTCTGGTTATGT
CGTCCCTTCAGCATGCGCTAAATCTGGCGTCGAAGCTATGACTAAGTATT
TCAATCTATTGTTCATCTTCTTACTTTTTGCATAATTAGCTCTGTTGGAA
GTGTCTCTCAAATCCTCATTCGGCACTTCAAAGACAAATTACTTTAAAGA
AATTCTGTTATCGCTTTTGTGTATCAGTTACGAATTGATGTAAACTTTTC
ACAGGTCCctattcatttttgaaattcgtCATAAGAAGGTACAAACACTT
AAAACACAACTAAGCTTACATTTGCCCACTAGAAGAACCGAGAAActaga
aataaaaagaaatgataaaaaataatccCTTCTTTAGATCGTTGTCATCA
GAATGGGCGAAGTATGGGATGAGGATGAATATTATCGCCCCTGGTCCTTT
TGAAACGGAGGtattttaaagtgttattgCTTTTTTCGACGATATAACGA
TATCCCAATATATACAGGGTCTTATTTGAAGAAAAGTCTGTATGCATAAA
ATCATGTTCCGGCGAGGATTAAATTTGCCGGACGGCATGGTAAATCGGTa
tctttttgcctaaaaatgagTGTTTTGGCAAGAATTAAGGTTTGATttcg
aaaattacaaaaaaagttaattttggcGACAGCCCATTTGGCAAATCTTG
TCAAAATTCCTTTAAAGATAATAGATTTTCTCCAATACGAGGACTTGGGG
ATGGTTTGTTGATTGCTTTCCATTGTTTGTGCTTCTATTATAGGGTGCTT
TCAAACGACTCGACCCTACTGGTGAATTCACAGCTCAAGGGAAGAAGAAA
ATTCCAGTGAAACGCTTTGGTGAGATTGAAGAACTGGCGAACTTAGCTGC
ATACATGGTGTCTGACTACTCGAGCTTCTTGAATGGTGAAGTAAGTACTT
GTAAACAATCGTATTGTTTGATCAAAACTTAAagctattgttccaaggtt
aaggGTTGCTTCTAaggctcaaaaatattttaatcaacTAGATGTCTTTT
GAGAAGTTAACATGTCTTTTAGAAGGccgtgattttgattttgatttatc
ttattttccctttttaactgaactctggttctttttctcaataaatgaaa
atgtttttcctcTTTGTCTAGATAATTACTTTCGATGGTGGAGAGAAGAG
AGCTTACAGTGGAAACTTTAACGGTTTGGATATGGTATGTTCTTAAACTG
ATTCATTCAGTTTCTGTTATTGACACCTTGCCATCACTTCGTAACTTAAC
GTTTTCAAATAGTTTCCTTTTGATTTCAAAGTGCGTTTACACCCCTGAGA
AAAAGAAAGTTAATCTGGACTTTATTTCGGGTGGGGTCAAAAGTAGGACG
GCATGGTCTCAAAGCTCCTAGGTTCAAACCTACTGGTACAAGACTGAAAA
AGTAAAGCGATTCCTTTTGATGTCAGTGTGTTCAAAGGGTTAATATCGTG
GAACCCTTTCAACACCTACCAACCTTCATCAGTATATTAGCGTCCGAAAT
AACCAGGATCAAATTTCGTTAAATGTTGTTTTATCTGAGCGTATAGTAAA
ACCTATGTAAACTCAAACCTAAACTCGCTTagctttttttttcacttaaa
acgCCAATAATTAAATTACTTTGTTATTTTTCCAGGTACCACAAGAGCAA
TGGGATATGCTCGAAAATATGATCAGAACCACCAACAAAAAATCCAAATT
GTAG Coding sequence (CDS) from alignment at sc0000098_pilon:135023..138276+ >XLOC_019465 ID=XLOC_019465|Name=XLOC_019465|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1932bp|location=Sequence derived from alignment at sc0000098_pilon:135023..138276+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACAAAACAAGTAGACTTTTAGGAAAACTAGCACAAGCATCTACTAC
AACAACAAGCGTACGAGAAATGAATAAATTTCCACCCGTTACAACGCCCA
TGTTGCCACCCAAATCTTTTGATGGGAAAGTTGCCCTCATTACGGGCGGT
GGTACTGGTTTGGGAAAAGGAATGGCTACAATGTTGTCCAGATTAGGTGC
TACCGTTGCAATTGCGGCTAGATGAACAAAACAAGTAGACTTTTAGGAAA
ACTAGCACAAGCATCTACTACAACAACAAGCGTACGAGAAATGAATAAAT
TTCCACCCGTTACAACGCCCATGTTGCCACCCAAATCTTTTGATGGGAAA
GTTGCCCTCATTACGGGCGGTGGTACTGGTTTGGGAAAAGGAATGGCTAC
AATGTTGTCCAGATTAGGTGCTACCGTTGCAATTGCGGCTAGACGGTTAC
CAGTATTGGAGGCAACTGCAAACGAAATCATGAACGAAACTGGATCTACA
ACGGTTACCAGTATTGGAGGCAACTGCAAACGAAATCATGAACGAAACTG
GATCTACAGTTCTTCCCATCAAGATGGACGTACGTGATCCAGAAGCTGTC
AAAGCAGCTATCGATCACCTGGAACAAGCTCATGGTCTTCCCAACATTGT
CATCAACAATGCAGCTGGCAACTTCATCTCACCTTTTGAACGTCTTTCAC
CAAACGCCTTCAAAACTATTGTGGATATCGTATTGAATGGAACAGCTAAT
GTGACTTTAGATGTTGGCAAACGATTGATCAAGGCTGGACAAGGTTCTTC
CCATCAAGATGGACGTACGTGATCCAGAAGCTGTCAAAGCAGCTATCGAT
CACCTGGAACAAGCTCATGGTCTTCCCAACATTGTCATCAACAATGCAGC
TGGCAACTTCATCTCACCTTTTGAACGTCTTTCACCAAACGCCTTCAAAA
CTATTGTGGATATCGTATTGAATGGAACAGCTAATGTGACTTTAGATGTT
GGCAAACGATTGATCAAGGCTGGACAAGGTGCGAATTTTTTGGCCATCAC
AACTTGGTATGCAGAGATGGGTTCTGGTTATGTCGTCCCTTCAGCATGCG
CTAAATCTGGCGTCGAAGCTATGACTAAGTGCGAATTTTTTGGCCATCAC
AACTTGGTATGCAGAGATGGGTTCTGGTTATGTCGTCCCTTCAGCATGCG
CTAAATCTGGCGTCGAAGCTATGACTAAATCGTTGTCATCAGAATGGGCG
AAGTATGGGATGAGGATGAATATTATCGCCCCTGGTCCTTTTGAAACGGA
GATCGTTGTCATCAGAATGGGCGAAGTATGGGATGAGGATGAATATTATC
GCCCCTGGTCCTTTTGAAACGGAGGGTGCTTTCAAACGACTCGACCCTAC
TGGTGAATTCACAGCTCAAGGGAAGAAGAAAATTCCAGTGAAACGCTTTG
GTGAGATTGAAGAACTGGCGAACTTAGCTGCATACATGGTGTCTGACTAC
TCGAGCTTCTTGAATGGTGAAGGTGCTTTCAAACGACTCGACCCTACTGG
TGAATTCACAGCTCAAGGGAAGAAGAAAATTCCAGTGAAACGCTTTGGTG
AGATTGAAGAACTGGCGAACTTAGCTGCATACATGGTGTCTGACTACTCG
AGCTTCTTGAATGGTGAAATAATTACTTTCGATGGTGGAGAGAAGAGAGC
TTACAGTGGAAACTTTAACGGTTTGGATATGATAATTACTTTCGATGGTG
GAGAGAAGAGAGCTTACAGTGGAAACTTTAACGGTTTGGATATGGTACCA
CAAGAGCAATGGGATATGCTCGAAAATATGATCAGAACCACCAACAAAAA
ATCCAAATTGTAGGTACCACAAGAGCAATGGGATATGCTCGAAAATATGA
TCAGAACCACCAACAAAAAATCCAAATTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:135023..138276 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 895-963:3186 |
| Aaloc | 832-894:2672 |
| Aaloc | 685-831:2294 |
| Aaloc | 613-684:1889 |
| Aaloc | 514-609:1498 |
| Aaloc | 277-510:842 |
| Aaloc | 220-276:445 |
| Aaloc | 46-216:49 |
| Aaloc | 1-45:1 |
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