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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000236_pilon:405076..408912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019392 ID=XLOC_019392|Name=XLOC_019392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3837bp|location=Sequence derived from alignment at sc0000236_pilon:405076..408912+ (Clytia hemisphaerica_ch_hm2_pilon)
TGCCACGCGAAAAGATCTGAAGATCGGTCTCAGATATCCTTGTTTGAAGA
ATCATGTTGTACGTCTATTTGAATATTTACTAGTACACCTATGTCTCATT
GATTCGAAAATCTTTCACACTTTATTAATACAggatttattaaatatttt
cttcttgagaaggaaatatttgttaaaacggtaatttttctccttcttct
tcaagtctaacgccggttttggtcaatttcgtgagttttttACACGACGT
TCTCTTTTTAATTCGAGCTCCGATGGGAAAAACAGTAGGGTGTTCTTTAT
CAAAGacggaagacgtcattttttcAAGACACGTCGCAGGAAATATGCGT
ACGGTGGTCCTTGCCGATCGGAAAACGTCGCCCGGTCCGAAAGCTGATGT
TGaccggaccatactgctttttaacagtcataacaaagatggaggcaaaa
aatagacaacaaatgtctttttctttggtttttatgctttcatGAGTTAA
ATTGGATCATGCTTTTTATACGATTGTCTAATTTGTCTTGAACTTggtac
ttggagattttcttccccgtgcaTTTATAATGTGGAAAACTTCTGTTGTG
AATTTGTAGATTGTCTTCCCcgtgcatttaaaacgtggaaaattttggtt
gtgaatttgtagattttttcccacgtgcgttttaaaggcaaaaggttgaa
acttttgttataaatttggagatttcttacatGTGCATTTAAATAtgatg
gaaaacttttgttacaaatttattttcttccaTGCGCGttgaaaacgtgg
aaaactttataaattttgcgatttcttacacatgcatttaaaagttggaa
aacattttttatgaatatatattttcttcaatgtgcgtttaaaacttgac
attttcttccacatgcatttaaaaaatgaagaaaactttggtgtcaattg
acaattttttcaagtgatttcctggcctgGCGTGAcaactttttttcctt
tttgtcattctttcatttcagatatttgcccttttttgctaatatttcCG
GCAATAAGCGCTTAAAATAAAActcgcacgctgcgtgtcccaatccagtg
aatcactatacatcaaaaaaattctaacggAAGAAAGATAACCGCCaatt
gatgatttgattttgattttaggaaataaaggagaaaaaagataacattg
cattgcaattttaaaccacaattaaataaatggcttagcaaaagtatatt
ttagatcttcttagccatcgtggctggccatcgtggttggacatacgagg
gtgactttgatagactttgaaaagttttgaaagtgacaGGGAGatgctat
tgtaaacagaaagttttaaagagcatctgaataagaattctttaaaatga
caaaaaaaaattgggaagaaggttgattttaacccatcaagctccaaaat
tgatgaatagaaaatagtattttgGGGTCTCAAAGTCAGTCTAGTtgctt
aaggtgcaaaaagatTATGGTTAAACACCATGAAGAGGatgctttgtaga
gctttgttagattttcgaaaaccttttacaaaactttgtaaacacacacg
tttaagcatattaatatatagattagagagACAGTTTCAGATTGAAAGTT
TGAAAGGCACTCTTGCTATACCCTTGAATGAAGTTACTAATTTTACGCAA
GCCACAGTTAGCTAACTGGTTCAAATGAATGCACGTTCTTCAAATTTACC
AAAGTTCAAACCGCGACAAagtattatataaaaatgttttagaaagtttt
gatagggagccgctattgtaaacagcaagttttaaagagcatctgaataa
gaattctttaaaatgacaaaaaaaatgggaagaaagttgattttaaccca
tcaagctccaaacttggtgaatagaaaatagtattttggggtctcaaagt
tagtctagtggtaggaaatctggttaaggtgcaaaaagatgatggttcaa
cgccatgaagtggaggctttgtagagctttgttagattttcgaaaaattt
ttacaaaacgttgtaaacacacacgtttttaagcgtattaatatatagat
tagagagacaatttcaaagtgaaagtttgaaagacaCTCTTGCTATACCC
TTGAATGAAGTTACTAATTTTACGCAAGCCACAGTTGGCTTACTGGTTCA
AAAGAatgcacattcttcaaaaagaccaaagttcaaaccgggacaaagta
ttatataaaaatcttttaaaaagttttgaaagtgatagtgGGCCGCTATt
ataaacagaaagttttaaagagcatctgaataagcattctttaaaatgac
aaaaaaaaattgggaagaaggttgattttaacccatcaagctccaaaGTT
GGTGAATAGAAATAGTATCTTGGATTCTCAAACTTAGTTTAGTGGTAGGA
AAACTGTATAAGGTGCagaaagatgatggttcaacgccatgaagaggagg
ctttgtcgagctttgttagattttcgaaaactttttacaaaacgttgtaa
acacacacgtttaagcgtattaatatatagatgatGATATAATTATGCAC
TATCCCAAggccttttgatgtgttcaataaCACAACACTCTCCACTCTCG
GCGGGTGCGACACCGGGTGACAGCTAGTATAACACTAAAATCCAACTAAA
GTCcatctactctcgggtacctaatagccggggggaatggaataagcggg
ggggttggaaaaaatctcaaaacttaataagcgggggggttagaataaaa
atgtcctgggtggcaaattttttaaaagaaggctaatacagcagaattgg
gacataaaagggaactttcaaaaacattttcccaaaaattaaagGTTGTC
TAGCCAATTTGGCTACTGCATTGTTATTATCAGTCGACTTCTGCTTGGAT
ATACTCCGTAATCCGTAGGTTTGAACCTTAGTCATCTTAGGAATAATCCT
GCAAATACTAGCAATTACAtaaacgaattttgaaattcttgtggacttgt
gttgcttgatgttatctgagataaagcactttgaaatcttttgaggacat
caataattattttatcgtTTGTAAAGGAAATAGTTATCCGcctctttgcg
gctcttgtttgtAATACATAGGctttttcttttccaaattttccatttta
cggaattttcaaatgaaaccCTGTTGATATGCTAATTTTTCTataacaat
ttcttttaaaaaatcgacTAAAGAGTAATTTTTTATGagtaatgtttttt
ttgttctaGCTGAGAACCCAAATTCAAGAATCCATCTATCTGAAACAGAC
GCGGAACTTCATTTCAAGAGGATCGCCGATTATTTGGCTTTAGGTGGGGA
AGTTTGGTGGAAAAGAGAAGGTGACTGGTTGGTATTTTCTGACGGCGATC
ATGCACCTGCTTTCAGACCTGAGGGTCCTCAACTGATGAGTTTTGAAAGT
CACGTTATCAATGATGCGCGCAAAATGCTACCGAATTGCTGGGAAACGTG
TAAGCTGAAAGAAATCGATTCTGCTATACGGCTGTTCCCAGGTAAGTTTT
AAAGCATTGAAAAAATACACCTGTGTATTTCACTTAAGTTAATCAGCTAT
ATTGGCATTCTCTGCATAAACAGGCACTTGATGACATCTCCAGCagatct
aaagtctattcactcTATTTAGATAAACAATAACCTTTATCTAATGTAAT
TGAAACTTTTTCTCTCTGTTCTCAGTACCTCTGGAAATGCCACCTGATGC
TGAAATAGAACCGACAAAAGACAACGCACCAACTTCC Coding sequence (CDS) from alignment at sc0000236_pilon:405076..408912+ >XLOC_019392 ID=XLOC_019392|Name=XLOC_019392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=804bp|location=Sequence derived from alignment at sc0000236_pilon:405076..408912+ (Clytia hemisphaerica_ch_hm2_pilon)
TGCCACGCGAAAAGATCTGAAGATCGGTCTCAGATATCCTTGTTTGAAGA
ATCATGTTTGCCACGCGAAAAGATCTGAAGATCGGTCTCAGATATCCTTG
TTTGAAGAATCATGTTCTGAGAACCCAAATTCAAGAATCCATCTATCTGA
AACAGACGCGGAACTTCATTTCAAGAGGATCGCCGATTATTTGGCTTTAG
GTGGGGAAGTTTGGTGGAAAAGAGAAGGTGACTGGTTGGTATTTTCTGAC
GGCGATCATGCACCTGCTTTCAGACCTGAGGGTCCTCAACTGATGAGTTT
TGAAAGTCACGTTATCAATGATGCGCGCAAAATGCTACCGAATTGCTGGG
AAACGTGTAAGCTGAAAGAAATCGATTCTGCTATACGGCTGTTCCCAGCT
GAGAACCCAAATTCAAGAATCCATCTATCTGAAACAGACGCGGAACTTCA
TTTCAAGAGGATCGCCGATTATTTGGCTTTAGGTGGGGAAGTTTGGTGGA
AAAGAGAAGGTGACTGGTTGGTATTTTCTGACGGCGATCATGCACCTGCT
TTCAGACCTGAGGGTCCTCAACTGATGAGTTTTGAAAGTCACGTTATCAA
TGATGCGCGCAAAATGCTACCGAATTGCTGGGAAACGTGTAAGCTGAAAG
AAATCGATTCTGCTATACGGCTGTTCCCAGTACCTCTGGAAATGCCACCT
GATGCTGAAATAGAACCGACAAAAGACAACGCACCAACTTCCTACCTCTG
GAAATGCCACCTGATGCTGAAATAGAACCGACAAAAGACAACGCACCAAC
TTCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000236_pilon | genome | sc0000236_pilon:405076..408912 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-402:3778 |
| Aaloc | 61-339:3312 |
| Aaloc | 1-57:1 |
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