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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000234_pilon:407485..409295- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019238 ID=XLOC_019238|Name=XLOC_019238|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1811bp|location=Sequence derived from alignment at sc0000234_pilon:407485..409295- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTTTCTACACTCCAAGGAAAAAGTCCAAAATGGCTGATAACCC
TGGTAAGCCCCAATCTTGTCTTTCGGTCTACAGAGAAGGCATTTTGAAAA
GAAAAAAGCATGATTATTCTTCTATCTATATTTTAGTATCAAAAGATCCT
AGGATCCATTATCAATAATTTACAAAACTTAAATATTAAAATAAAAATAA
TATTCCTAAAATGACTAACAAAGTAGCTAAAGTTTGATTTCCAAGACCAA
GAGCAGGTTGTCATTCCAGATAAAAAAGAATCACTTTTTGTCATACTTAT
AAATTTTTACTGTTCAAAATTTTTCCAAAAAGTGCCAAAAAATCACGCCC
ATTTTGCAGCACTGAAATTATGATATTTCCCAAACTGTACTCTGCAAACT
AATCCATGTTTTTATGTCAATGACGTGGATCAAACAATAAGGCGGCCATT
GAAAAATTGTTCTGTTCGTGTCTCCTGCCCGCATCATATTTTTTACTGAT
TTTCCAGTGCGAAGATGCGGAAAAAATCTAGGAAAAATCCAGAAGAAACA
GCTTAGTTCTTCAAATGTGTTACTTTTTCTTTGGGGGAGAGGGTTTTTTC
CGCCCGCCCGCCCGCCCGCATCTATTTTTAAGTCCTCCTGCGACGCGAAC
AGAACTATTTTTCGATGGTGGCCTAAACTGGGAGTAGCCAATTGAAATTT
TGTTTTATAGTTTTGGGACCGATTTCTTTCTCACTGTTTCGTCCTATCTA
CATTACATATATTTTATTTTCTTACAGGCGACATCGAAATCACTGGATAT
GTAAATTATGTTGGCCCGCGAAAGACCAGTTATTTTGAGGTTTATTTATG
TGATGAAACAAAAGAAACCAGAATAGTGGTTTTCTACCTTGATAAGCATG
AACCACTCAAAGATGCGCTATCGAAAGGAGTTACGCTGACTCAGCTGAAA
AAATCGACTTCCAATGCAAATGATCTTTTGTTTTCCAAAGACACGAAAGT
TATTATGACAACTCCACCCTATGAATACAACAAAAACATTGAAAATAATA
TCACATTGATTAAAACTGCTATTGAAGAATTGCCGTTATATAGTAGAGTA
AATGTTAAAGCTGCTGTTGTTGGCATGGAACCACCCGGCATGTCGAAAGA
ACTTTTGCCATTTCAAGTATTACTAGTTACAGATGATTCACTTAATGGCG
GTGATACACATCGATTAACCGTATATGATGATTTAGTTGGTAAATTTTCA
CCAAAGAAATGTTACAAATTCACATACATCACAGTAAGTATGTTTGATAA
CCGAAAAATTCTGAAAGGATCAGATAGAACCATTGTCACAAATTTACCAA
ACGGTTCCATCCAATTACCAGCTGTTCAAACTCTGAAGTTAAAGGGATAC
ATATCTGGAATCAAGTTGTCATCGCTACAGAAAATGTCTGTTTGTCCTAA
CTGCCAAAGTCGAGTAGAACTGAAGAGCTCGTTTGCGTCCTGTCTGAAAT
GTGACGAAGCCAAATCCTTGACAGATCTGTTAACAGTGTCACTTGTACAA
TTTACCTTGAAAGATTTGAACAATCAATGTTATCCTTTGATATGTGATCA
TACTCTATTAAAGTCTCTTTGTAGTGTCAGTATTGACAACACAGAAGTAT
CATTGCGTGAATTAATCAATTTAAAAGTCGCAGTCGAAGTGAAGAAAAAG
TCAAACGAAGTCTTGGCAATCCAAAAGATCGGTGATACTGATAGTGAACA
ACCAGAGAAAGCTGAAAGCAGCGAGCAGTCATCAGATGAATTTGATTCAA
CAACCAAATAA Coding sequence (CDS) from alignment at sc0000234_pilon:407485..409295- >XLOC_019238 ID=XLOC_019238|Name=XLOC_019238|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2172bp|location=Sequence derived from alignment at sc0000234_pilon:407485..409295- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCTTTCTACACTCCAAGGAAAAAGTCCAAAATGGCTGATAACCC
TGATGGCATCTTTCTACACTCCAAGGAAAAAGTCCAAAATGGCTGATAAC
CCTGGCGACATCGAAATCACTGGATATGTAAATTATGTTGGCCCGCGAAA
GACCAGTTATTTTGAGGTTTATTTATGTGATGAAACAAAAGAAACCAGAA
TAGTGGTTTTCTACCTTGATAAGCATGAACCACTCAAAGATGCGCTATCG
AAAGGAGTTACGCTGACTCAGCTGAAAAAATCGACTTCCAATGCAAATGA
TCTTTTGTTTTCCAAAGACACGAAAGTTATTATGACAACTCCACCCTATG
AATACAACAAAAACATTGAAAATAATATCACATTGATTAAAACTGCTATT
GAAGAATTGCCGTTATATAGTAGAGTAAATGTTAAAGCTGCTGTTGTTGG
CATGGAACCACCCGGCATGTCGAAAGAACTTTTGCCATTTCAAGTATTAC
TAGTTACAGATGATTCACTTAATGGCGGTGATACACATCGATTAACCGTA
TATGATGATTTAGTTGGTAAATTTTCACCAAAGAAATGTTACAAATTCAC
ATACATCACAGTAAGTATGTTTGATAACCGAAAAATTCTGAAAGGATCAG
ATAGAACCATTGTCACAAATTTACCAAACGGTTCCATCCAATTACCAGCT
GTTCAAACTCTGAAGTTAAAGGGATACATATCTGGAATCAAGTTGTCATC
GCTACAGAAAATGTCTGTTTGTCCTAACTGCCAAAGTCGAGTAGAACTGA
AGAGCTCGTTTGCGTCCTGTCTGAAATGTGACGAAGCCAAATCCTTGACA
GATCTGTTAACAGTGTCACTTGTACAATTTACCTTGAAAGATTTGAACAA
TCAATGTTATCCTTTGATATGTGATCATACTCTATTAAAGTCTCTTTGTA
GTGTCAGTATTGACAACACAGAAGTATCATTGCGTGAATTAATCAATTTA
AAAGTCGCAGTCGAAGTGAAGAAAAAGTCAAACGAAGTCTTGGCAATCCA
AAAGATCGGTGATACTGATAGTGAACAACCAGAGAAAGCTGAAAGCAGCG
AGCAGTCATCAGATGAATTTGATTCAACAACCAAATAAGCGACATCGAAA
TCACTGGATATGTAAATTATGTTGGCCCGCGAAAGACCAGTTATTTTGAG
GTTTATTTATGTGATGAAACAAAAGAAACCAGAATAGTGGTTTTCTACCT
TGATAAGCATGAACCACTCAAAGATGCGCTATCGAAAGGAGTTACGCTGA
CTCAGCTGAAAAAATCGACTTCCAATGCAAATGATCTTTTGTTTTCCAAA
GACACGAAAGTTATTATGACAACTCCACCCTATGAATACAACAAAAACAT
TGAAAATAATATCACATTGATTAAAACTGCTATTGAAGAATTGCCGTTAT
ATAGTAGAGTAAATGTTAAAGCTGCTGTTGTTGGCATGGAACCACCCGGC
ATGTCGAAAGAACTTTTGCCATTTCAAGTATTACTAGTTACAGATGATTC
ACTTAATGGCGGTGATACACATCGATTAACCGTATATGATGATTTAGTTG
GTAAATTTTCACCAAAGAAATGTTACAAATTCACATACATCACAGTAAGT
ATGTTTGATAACCGAAAAATTCTGAAAGGATCAGATAGAACCATTGTCAC
AAATTTACCAAACGGTTCCATCCAATTACCAGCTGTTCAAACTCTGAAGT
TAAAGGGATACATATCTGGAATCAAGTTGTCATCGCTACAGAAAATGTCT
GTTTGTCCTAACTGCCAAAGTCGAGTAGAACTGAAGAGCTCGTTTGCGTC
CTGTCTGAAATGTGACGAAGCCAAATCCTTGACAGATCTGTTAACAGTGT
CACTTGTACAATTTACCTTGAAAGATTTGAACAATCAATGTTATCCTTTG
ATATGTGATCATACTCTATTAAAGTCTCTTTGTAGTGTCAGTATTGACAA
CACAGAAGTATCATTGCGTGAATTAATCAATTTAAAAGTCGCAGTCGAAG
TGAAGAAAAAGTCAAACGAAGTCTTGGCAATCCAAAAGATCGGTGATACT
GATAGTGAACAACCAGAGAAAGCTGAAAGCAGCGAGCAGTCATCAGATGA
ATTTGATTCAACAACCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000234_pilon | genome | sc0000234_pilon:407485..409295 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 55-1086:1033 |
| Aaloc | 1-51:1812 |
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