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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:513180..515839- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019222 ID=XLOC_019222|Name=XLOC_019222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2660bp|location=Sequence derived from alignment at sc0000098_pilon:513180..515839- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACAGAAGAAGACAAGGAACTGATGAGAATGCGCTTAGAAACCTT
AAAAAGTAAATGACATACTCTTTTTTTTTCTCCACTTCTAGAACTCTTCA
TTTTCCTGGCATGTGGGCTCCTTTTATTTTTAGGAACAAAACCTCAAAAT
ATTTTTGCCTAACTATCTTCCTAAGTTGAGTTAGCTACAAGTAATTTTTT
ACTTTTATAAAGAATAACAACGAAAGAAGCGTGTAAGAACCCATTTTCAG
TAATTTCAAATAGTGATATCTCGACTTTGGGAGATAGTTAGACAGTGTTG
CAACTTTTCCGTCTGTAGACGGATATCCGTCCAGTTGAGAAACAAATATA
TCATTTCTGTCTTGCCAGTAAGAGAGGGTTTTTGGTTCAAATACCATCTA
ATCCTAAGGTTTCCGTCCATATTCACAAAAACTAGTTGCAACACTGGTTA
GACAAAATACTTGGAAGTTTTACTCAGGACCGTAGAAGGTTACTACGGGC
CAAATATCTCAAACCATCTGATGATCCCTTTAAGAAATCAAACGTCAACG
TTCTTAAATGTTTTTTTCATTCATTTATAAAGCGATGGTTGGAAAGCTTG
AAAGAAAAAAGACAAAATCTCCTTCCCCTGTTTCGAGGTGATTATTTCTT
ATAGTTAATTTTTACAATAACTTTGAGCTGCACTAGGTTTGATTACTGTA
TTTCAATTTTCTAAACTTTTGATTTTAGGGGTCTTCGTTGGAATTTTTTA
ATATAGCTCCGAATCGTTGGGAAAATACTTAAATTGAGCGCTGCGCACGT
TAAACTATTCTTATGATATAGTTTAGGATTATTGTGAGCAGATTTCTGCC
ACCATCTCTATACATCCAGTTCGTATCAAATAAGACCTCATCTTTTGTTC
CGTTTCTAGCAAACAAGTCACTTCTCCAAGAACAATAAAAGCTGTCCCCA
ATAAAAGTCAAGCTGGTTCAACTTATCTCTCGAATAATACCACAACAACA
ACCCACAAAAACAATCCACATCACAAAACCGACCAATACTCCCTACATCC
CAACAGACATAAATACGTCAAGTCTAAATTTTCAGTGCAAACAAGACCTA
ATTTTGGATCGTCAGTAAATTCAAGCAAAACATGGAGTCGACCGATACAA
CCAATTCTACCCACTGTATCAACAGATCTAACAAAAATGACCAATCCTAA
TCCAACCAGCAACAATGGACGCCCCATCTTACCAACAGTTTCAGGGTCAT
TCACAAAGTTAACTAAACAACCTATAAGCAATGCATCAAAACTACCCACA
AGACCAATCTTACCCACCGTATCAGACACGTTTACACAGATTAACACCAT
CACAAAAAATAGCAATGTATCAAGTATATCCACTCGCCCTTCATTACCAA
TAGTTTCAAAAACGCTTGTGAAAACAATAACACACCCTTCTAGTGATCTG
ACACGCACATCATCAAAACATAAATTTGTTAGGAAAAACACTCAACCGGG
TAGTATTGCTTCGGTCGCTCCGGTCCCAAGCCGCTCTAATTACATTTTTA
ACAAAGCCAAACGAACTGAATATGCCGGAAACAAATTTCTAAGTACTCGC
TTGAAACCAGAATTGGAAAGAGACTCAGACGACGCCTTCCGAAGGACTCA
TTTTGTAAACAATTCAGCAAATATTGATTTCTCCTCTACCATAAAACCTG
CTCAAACTCAACTCGTTAAGAAATATAGCTTCGTAAATAAAGTAATCTCT
AAACCCGTTGTTGGTCGTACTAAAAGAACAAAAAGTCGTTACAAAGTAAA
CAATGCTCACGTTGCTTCATTATCCAACAAATGGTCGGAAAATACGCAGA
ACAAATGGCACGCTCAATCATATCCACGAACTGTCGTCACCAGGAGAAAG
TCCAATGAAAATCGTTTTAAGATCTCCAAAATACCGCTCGTTTCTGTAAG
TCGGGCCCTCAGACGAACCGTAACGCAATTCTATTTTGTATATTGTTCGT
TTTTTTCAAATTTATCTCTAAATGAAGAAACCAGTCAAATTGTCTTTGTT
TTTTATTTTGTGGCCCGGTGGCCATTTCACTTAGTTTTTACTTTACTGTA
AGACTGATATTTTCTCCCCGCTTTCAGGTGTCACGGAACAAGCTGATTCG
CAAAATTACAGATGCACAAAGTAACTCATTTTACTTAAGGTACGTTGACA
GTGAGATTAAATATGCATTCTAGAGCCTTCTTAATTGTATTTCCCGATTT
CAACATCTCGAAATAGTTTTATTCTGAAAAATTAACTAGTTAACAAATTA
ACAATTCTGCTGCTATCGTTGTTTTTTCAGGCGCTCCTCCTATTTGAAAC
AAACCATCAAAACAAAGGTAATTTTTTTATACAAATACGAAAGTGACGTC
AAAAATGGTCCTATCAGTACTAAATAATGTCTAATAGACCCCCAAAAAAA
ACCCTATAATATGAACGAAATCTTGTTATGTAGGCAGTAATAAAGGTAGC
ACGTATGAGGCAAAAGTCTGACACTTTCTTTCATCTTTCCTGTTTATATT
TGCAGCCGAAACCATCAAAACATTACCAAACTCCCTCAACCGATTCGTCA
TCAAATGAAATGTTATTATCAAGACATGGTTCGAAATATTTAGTGTCTGG
TAATATGAAA Coding sequence (CDS) from alignment at sc0000098_pilon:513180..515839- >XLOC_019222 ID=XLOC_019222|Name=XLOC_019222|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000098_pilon:513180..515839- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAACAGAAGAAGACAAGGAACTGATGAGAATGCGCTTAGAAACCTT
AAAAAATGGAAACAGAAGAAGACAAGGAACTGATGAGAATGCGCTTAGAA
ACCTTAAAAACGATGGTTGGAAAGCTTGAAAGAAAAAAGACAAAATCTCC
TTCCCCTGTTTCGAGCGATGGTTGGAAAGCTTGAAAGAAAAAAGACAAAA
TCTCCTTCCCCTGTTTCGAGCAAACAAGTCACTTCTCCAAGAACAATAAA
AGCTGTCCCCAATAAAAGTCAAGCTGGTTCAACTTATCTCTCGAATAATA
CCACAACAACAACCCACAAAAACAATCCACATCACAAAACCGACCAATAC
TCCCTACATCCCAACAGACATAAATACGTCAAGTCTAAATTTTCAGTGCA
AACAAGACCTAATTTTGGATCGTCAGTAAATTCAAGCAAAACATGGAGTC
GACCGATACAACCAATTCTACCCACTGTATCAACAGATCTAACAAAAATG
ACCAATCCTAATCCAACCAGCAACAATGGACGCCCCATCTTACCAACAGT
TTCAGGGTCATTCACAAAGTTAACTAAACAACCTATAAGCAATGCATCAA
AACTACCCACAAGACCAATCTTACCCACCGTATCAGACACGTTTACACAG
ATTAACACCATCACAAAAAATAGCAATGTATCAAGTATATCCACTCGCCC
TTCATTACCAATAGTTTCAAAAACGCTTGTGAAAACAATAACACACCCTT
CTAGTGATCTGACACGCACATCATCAAAACATAAATTTGTTAGGAAAAAC
ACTCAACCGGGTAGTATTGCTTCGGTCGCTCCGGTCCCAAGCCGCTCTAA
TTACATTTTTAACAAAGCCAAACGAACTGAATATGCCGGAAACAAATTTC
TAAGTACTCGCTTGAAACCAGAATTGGAAAGAGACTCAGACGACGCCTTC
CGAAGGACTCATTTTGTAAACAATTCAGCAAATATTGATTTCTCCTCTAC
CATAAAACCTGCTCAAACTCAACTCGTTAAGAAATATAGCTTCGTAAATA
AAGTAATCTCTAAACCCGTTGTTGGTCGTACTAAAAGAACAAAAAGTCGT
TACAAAGTAAACAATGCTCACGTTGCTTCATTATCCAACAAATGGTCGGA
AAATACGCAGAACAAATGGCACGCTCAATCATATCCACGAACTGTCGTCA
CCAGGAGAAAGTCCAATGAAAATCGTTTTAAGATCTCCAAAATACCGCTC
GTTTCTCAAACAAGTCACTTCTCCAAGAACAATAAAAGCTGTCCCCAATA
AAAGTCAAGCTGGTTCAACTTATCTCTCGAATAATACCACAACAACAACC
CACAAAAACAATCCACATCACAAAACCGACCAATACTCCCTACATCCCAA
CAGACATAAATACGTCAAGTCTAAATTTTCAGTGCAAACAAGACCTAATT
TTGGATCGTCAGTAAATTCAAGCAAAACATGGAGTCGACCGATACAACCA
ATTCTACCCACTGTATCAACAGATCTAACAAAAATGACCAATCCTAATCC
AACCAGCAACAATGGACGCCCCATCTTACCAACAGTTTCAGGGTCATTCA
CAAAGTTAACTAAACAACCTATAAGCAATGCATCAAAACTACCCACAAGA
CCAATCTTACCCACCGTATCAGACACGTTTACACAGATTAACACCATCAC
AAAAAATAGCAATGTATCAAGTATATCCACTCGCCCTTCATTACCAATAG
TTTCAAAAACGCTTGTGAAAACAATAACACACCCTTCTAGTGATCTGACA
CGCACATCATCAAAACATAAATTTGTTAGGAAAAACACTCAACCGGGTAG
TATTGCTTCGGTCGCTCCGGTCCCAAGCCGCTCTAATTACATTTTTAACA
AAGCCAAACGAACTGAATATGCCGGAAACAAATTTCTAAGTACTCGCTTG
AAACCAGAATTGGAAAGAGACTCAGACGACGCCTTCCGAAGGACTCATTT
TGTAAACAATTCAGCAAATATTGATTTCTCCTCTACCATAAAACCTGCTC
AAACTCAACTCGTTAAGAAATATAGCTTCGTAAATAAAGTAATCTCTAAA
CCCGTTGTTGGTCGTACTAAAAGAACAAAAAGTCGTTACAAAGTAAACAA
TGCTCACGTTGCTTCATTATCCAACAAATGGTCGGAAAATACGCAGAACA
AATGGCACGCTCAATCATATCCACGAACTGTCGTCACCAGGAGAAAGTCC
AATGAAAATCGTTTTAAGATCTCCAAAATACCGCTCGTTTCTGTGTCACG
GAACAAGCTGATTCGCAAAATTACAGATGCACAAAGTAACTCATTTTACT
TAAGGTGTCACGGAACAAGCTGATTCGCAAAATTACAGATGCACAAAGTA
ACTCATTTTACTTAAGGCGCTCCTCCTATTTGAAACAAACCATCAAAACA
AAGGCGCTCCTCCTATTTGAAACAAACCATCAAAACAAAGCCGAAACCAT
CAAAACATTACCAAACTCCCTCAACCGATTCGTCATCAAATGAAATGTTA
TTATCAAGACATGGTTCGAAATATTTAGTGTCTGGTAATATGAAACCGAA
ACCATCAAAACATTACCAAACTCCCTCAACCGATTCGTCATCAAATGAAA
TGTTATTATCAAGACATGGTTCGAAATATTTAGTGTCTGGTAATATGAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:513180..515839 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1246-1350:106 |
| Aaloc | 1210-1245:330 |
| Aaloc | 1147-1206:534 |
| Aaloc | 112-1146:1751 |
| Aaloc | 58-108:2077 |
| Aaloc | 1-54:2661 |
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