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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000098_pilon:509838..512617- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019221 ID=XLOC_019221|Name=XLOC_019221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2780bp|location=Sequence derived from alignment at sc0000098_pilon:509838..512617- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTCAGAGAAAATGACAGCAAAGAGGCGAAAAGTACCCGTTCACAA
CAACGCTAACAAATTTAAATTCAACAGAATGAACTCAGTGAATAAAAACA
GAAAAGTGTCTTCCAAACAAATTGTAGCAAGGTATGCAAGGCGTTTTTCT
ACACAATTTTCCACACAATTTTCCCATTATTTAGTGGAGCACCTCAAATT
TGTGGTCTATCAATTATATCAGTTAGGGGTGTACCAGGGTGTACGTCATC
GTGATTGATCATTTTTAGCACGCCCATGAGAATTTTCAAATTTGTATAAA
TCCTAATCTATCCCTCTACGAATTCTTACTTTATTTTCAGCCATGTCTTG
AAGAGGAGTCGCATTCTCACACAGTCACAACGCAAGAAGACCAACAAAAC
TAAATACTGCTTGTTTTATAACCGGTTCGGTAAGCTAAATCTTTGTCAAT
TCAAAAGAATTATTTTGTCTATATGAAGCCTATTTCTTGATACAAAAATA
CAAATGGACTATCTTAAGGGTGTTTGAAGAAAACCAGGGGAGTGTCTTCG
GGCAAACAACTAAAGAAAAGGAAGCCTTCGGGTTGGGACGTACTTTCTTA
AACTACGTTTTTGAAACACTATGTATGTATTATTATCCTTTAATTCTCAG
GTAAATGCAAACGAGGCGAGGAGTGTCCTTTCATTCACGACCCTTCAAAA
GTGGCTGTTTGTACGAGGTATGTCGAAGAAAATCTTTGAGTCGCGTCAAT
TCTCTGAGATTGTCCCTTTAATGTCTCTTAATCGTGGGTCCTTTTCCTTT
TCCACCCAGGCCGGTTTATTTAATGAGTGGTTTCGGTAGCTTAATCAATC
TTATTCATTGACTTATATTTAATTTTAGAGAAATTGTGAATTATCTCTTT
AGGTTTTTACGTGGTACTTGCAAAGATGAACAGTGTCCATTTTCTCACAA
GGTGGACCCGAGTAAGGTGGGTCATCTTTTAGCCAACTGCTTGTAAATCC
AAAAAGACTGATTGATATAGACCTGACACAAACTGGACTTAACGGAATTA
ACAAATCTATTAGACTATGGAGCAGAATGGGAAAAACTTGTGGTGCTTTT
GTTCAAACGCCTAACAAATAATATGATCTATTCAAGTGGCCACCCTATAT
TACAGAGTCGCTTTGTTTTATTGACATTTCGAACTCTCCTTTCCAGCCAA
ACCATGTTTCTACGAGAATTTAGATCTAAACAACCACTTCTTCTTTAGAT
GCCGGTTTGTTCTTATTTTCTGTTGGGTAAATGTACAAAAGATGATTGTC
CATATCGTCACGTTAACGTGAGCGAGGATGCTGATGTTTGCCAGGATTTC
TTGAACGGCTACTGTGCATTGGATGATAAGGTATATTATGTTTTGATTGG
TTTTGATTTAGTCCTTTGGTCAGACTCAACAAATTCAAGATTGATAGCGC
TATTGTTTCGAGACCTGCTCTGAGCCTCGGTATGCATTCAAGTGTTTTCG
AAAGCGATTCAGTTTTAGATCCTTGCTGAGTCTCTTTGTTCTAAACTTTA
CTGTCTAAAATCTAATGTTTTTATCAGTGGCCATTGACTTTTTTCAGTCG
GATGTATGGGACGTTTACGTAAGAAAAAGTTAATAGTCTTTGATTATTCT
CTTTTAGTGCAAGAAAAAACACGTCCTTGAATGCCAAGAATTCATGAATT
CCGGGAAATGTTCGAAAGGAAAAACATGCAAACTCTATCATCGCACGCGA
AAGCGTCCCTTGAGGAAACGGAGAAGCTCTACATCAGGTTTTCGCAAACC
GAAAGGATTTACCGCTAAAGTTGCAGAGGAAATGGCTACCGATGGTCATT
GTTCATCTGGCACTGATACGATGTCTCCCTTAAAAAATAAAGGTTTGCTG
CTTTTTTGTGCCCGTCCCTTTGATTCGCTTTTTGTTCGCTCTTTGTTCGT
ATACATTGGAAACGATGCCTGTTTTTATTACGTCTCCTTCGAATCACAAA
CATGCTGTTAACTTTGATTTGTTTTTGACTTTTTATTATCTAATGTGAAC
CGTACTGTACTTCTACCCTTACTGTTTTTTCAGCTAATTCTAATCTGCTG
CCGAAATTTATCAGCGATAAACTCAAAAAAGACGCGTAAGTCTTCTGTTG
TATTTTTATTATGCCCCTGTCTGTCTGTCTGTCTGTCTGTCTGTATGTCT
TTCTGTCTGTCTTTCTGTCTGTCTGTCTGTCTGTCTGTCTATCTGTCTGT
CTCAGGACTAATTTAAAGGTCTATAGTTTAGATATCTTTGGTCGTTAAGA
TGTAATAAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATC
ACTTTAAATGACCAATTAGTGAAGTATCTTGTAAAAACTCCAAGGCATCT
CACATTTTGACATCAAATGTATCCACGAAAGGTTAAGTTTGTAATGTTAG
GGTTGAGGGTATCAGTAAAACTTCACAAATGAATAACAAATTCCTCTTTC
TGCTTTTTCGTTTCTTTATTAATCTAGCCATGAAGCTGCACGTGCCATCA
ATTTCTCTGAAGTTCGATCACTAGGCTGCTTTACGTCATCCGCAACAAGT
GATATAGAAATGAGCGATTCGGATGAGCGACAAGTGAAGACTGAAAAACC
GACACGACGGATATCGGACGGATTTATACCGCTATCGATGGAGTCGTCGT
CGTCTGAGGACGAGGCTGCCGACGAATTGCATGTCGGGAACTTCTCGATG
TCGGTCAAAGATTACATTTCACTGGATTGA Coding sequence (CDS) from alignment at sc0000098_pilon:509838..512617- >XLOC_019221 ID=XLOC_019221|Name=XLOC_019221|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2046bp|location=Sequence derived from alignment at sc0000098_pilon:509838..512617- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGATTCAGAGAAAATGACAGCAAAGAGGCGAAAAGTACCCGTTCACAA
CAACGCTAACAAATTTAAATTCAACAGAATGAACTCAGTGAATAAAAACA
GAAAAGTGTCTTCCAAACAAATTGTAGCAAGTTAGATTCAGAGAAAATGA
CAGCAAAGAGGCGAAAAGTACCCGTTCACAACAACGCTAACAAATTTAAA
TTCAACAGAATGAACTCAGTGAATAAAAACAGAAAAGTGTCTTCCAAACA
AATTGTAGCAAGCCATGTCTTGAAGAGGAGTCGCATTCTCACACAGTCAC
AACGCAAGAAGACCAACAAAACTAAATACTGCTTGTTTTATAACCGGTTC
GCCATGTCTTGAAGAGGAGTCGCATTCTCACACAGTCACAACGCAAGAAG
ACCAACAAAACTAAATACTGCTTGTTTTATAACCGGTTCGGTAAATGCAA
ACGAGGCGAGGAGTGTCCTTTCATTCACGACCCTTCAAAAGTGGCTGTTT
GTACGAGGTAAATGCAAACGAGGCGAGGAGTGTCCTTTCATTCACGACCC
TTCAAAAGTGGCTGTTTGTACGAGGTTTTTACGTGGTACTTGCAAAGATG
AACAGTGTCCATTTTCTCACAAGGTGGACCCGAGTAAGGTTTTTACGTGG
TACTTGCAAAGATGAACAGTGTCCATTTTCTCACAAGGTGGACCCGAGTA
AGATGCCGGTTTGTTCTTATTTTCTGTTGGGTAAATGTACAAAAGATGAT
TGTCCATATCGTCACGTTAACGTGAGCGAGGATGCTGATGTTTGCCAGGA
TTTCTTGAACGGCTACTGTGCATTGGATGATAAGATGCCGGTTTGTTCTT
ATTTTCTGTTGGGTAAATGTACAAAAGATGATTGTCCATATCGTCACGTT
AACGTGAGCGAGGATGCTGATGTTTGCCAGGATTTCTTGAACGGCTACTG
TGCATTGGATGATAAGTGCAAGAAAAAACACGTCCTTGAATGCCAAGAAT
TCATGAATTCCGGGAAATGTTCGAAAGGAAAAACATGCAAACTCTATCAT
CGCACGCGAAAGCGTCCCTTGAGGAAACGGAGAAGCTCTACATCAGGTTT
TCGCAAACCGAAAGGATTTACCGCTAAAGTTGCAGAGGAAATGGCTACCG
ATGGTCATTGTTCATCTGGCACTGATACGATGTCTCCCTTAAAAAATAAA
GTGCAAGAAAAAACACGTCCTTGAATGCCAAGAATTCATGAATTCCGGGA
AATGTTCGAAAGGAAAAACATGCAAACTCTATCATCGCACGCGAAAGCGT
CCCTTGAGGAAACGGAGAAGCTCTACATCAGGTTTTCGCAAACCGAAAGG
ATTTACCGCTAAAGTTGCAGAGGAAATGGCTACCGATGGTCATTGTTCAT
CTGGCACTGATACGATGTCTCCCTTAAAAAATAAAGCTAATTCTAATCTG
CTGCCGAAATTTATCAGCGATAAACTCAAAAAAGACGCCTAATTCTAATC
TGCTGCCGAAATTTATCAGCGATAAACTCAAAAAAGACGCCCATGAAGCT
GCACGTGCCATCAATTTCTCTGAAGTTCGATCACTAGGCTGCTTTACGTC
ATCCGCAACAAGTGATATAGAAATGAGCGATTCGGATGAGCGACAAGTGA
AGACTGAAAAACCGACACGACGGATATCGGACGGATTTATACCGCTATCG
ATGGAGTCGTCGTCGTCTGAGGACGAGGCTGCCGACGAATTGCATGTCGG
GAACTTCTCGATGTCGGTCAAAGATTACATTTCACTGGATTGACCATGAA
GCTGCACGTGCCATCAATTTCTCTGAAGTTCGATCACTAGGCTGCTTTAC
GTCATCCGCAACAAGTGATATAGAAATGAGCGATTCGGATGAGCGACAAG
TGAAGACTGAAAAACCGACACGACGGATATCGGACGGATTTATACCGCTA
TCGATGGAGTCGTCGTCGTCTGAGGACGAGGCTGCCGACGAATTGCATGT
CGGGAACTTCTCGATGTCGGTCAAAGATTACATTTCACTGGATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000098_pilon | genome | sc0000098_pilon:509838..512617 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-1023:253 |
| Aaloc | 721-768:696 |
| Aaloc | 484-717:1124 |
| Aaloc | 352-483:1533 |
| Aaloc | 289-351:1878 |
| Aaloc | 223-285:2129 |
| Aaloc | 133-219:2440 |
| Aaloc | 1-129:2781 |
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