XLOC_019151 (mRNA) -

Overview
NameXLOC_019151
Unique NameXLOC_019151
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:59945..68452+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_019151 ID=XLOC_019151|Name=XLOC_019151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8508bp|location=Sequence derived from alignment at sc0000023_pilon:59945..68452+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTATGGCACCAATACATCATTGACTTGCCACGATGAAACTCGAAGAAT GCAAACTCTTGAACCCTATGCCACTTCAATCAGTATGCCTGAAAAAGCTC TTAGACCTTCTGTTGCAAATGCTGGTAATGTCAAGAACTACAAATTTGAC GATGGTATGATTGAAGAGGTATATATTACATGATATTGCATTCATAGATA AGAAAATCAGCAGATGTCAGCAATATTTCACTCACTCTGGAGAATCATCT TTTTGCGTAGACTGCTGCAATGATGTCCTTTCTaactttttcttcctttt taggGCAAAGAGTTGGTAGAAGCAGGAGAAGAAATCAATTTAACAAGATT AGGTTTGAAGTATCATCTAATGCACTCCGAGACAAAAAATGTACCCGGAC ATATCAGTCAAGTCACGAAAGAAATTCTTCTCGCGAATGGTGTGGACGGT GACAAGATGAAGCTTGGAGCAACAAGTGGGACGCGTCGTCGTAGGGCCAA AAGAAAGTACGTTTTTATAAACATTACAGGTTCTTTCaaaaatgagaatt gaaaaatgaaaaaaaactcaaagtGCTATAAATATGAACTCTTAATCATT GAATTAAGGGAATACTTATTAGATTTCGAGGTATAATcccactttttttc aaattttacgagTTGAGTATCGTCGAGGATTCCATACTAAGAGtttttta tgtaagtttttatgcttataaaaactttattttttatcaacttCGAATCA ACTTTAATCTGTGGATTTTGCAGGATTCTCGACACCAATATCCCGGTACC GACGGACGAGAGCAGTTCAAAAATCAAGACTCGCCTCAAAGACGCAGTAA ACAATGTAAGAGTTGTTTTCTGATATCTTCGAAATTAGACAGATGGATGG GTTCGACCTGTGAGAAAAACTTTCTGCCTTAATTTATAgttaatttgaaa gattttattagAAGgaacactgggcgaaataatgtCTTTCAAATCGTCGG AAAGATGTAGGAAGGTCACATTTCCACACCTTTCGACAGAGTTgaaagtt ggtctttcaacaaATATTGGAAAGATGTGCACCTTACCTTTCAACATCTT TCGACCAGATCATCTTCccatctttccaaaaaagttgaaagacgaccttc tcaaactttcaaacaggctgggaaaatgaaattcccaacttcctaatatg ttgaaatttcatattctgaCATCTTTCGACAGGTTTTaaagttggtcttt caacaaGGATTGGGAAGTTGTGCACCTTACCTTCCAACATCTTTCGACCA GATCGTCTTCccaactttccaaaaaagttgaaagaccacattctcaaact ttcaaacaggctTGAAAAATTACATTCCTTAACTtcctaatatgttgaaa tttcatattccgaaactttctaaatactttggaagatgatttttgctttt ttcgaaatctttcattaacacgtcttcaaaagtaaatgagagatctttta aataatttgtgTTTATGTGCGGATAAATTTTTTCTGTGACATTAAAACGA ACAATTCATATATTTACAAAGCatagaaaacagaaaatatgaaacaaaaa agtacGGTAGTGAtgactttttgctaaaaaattaagtagtctaaataaaa taattctgaatGACAAATTACACGTTTCGTATAAGgaaattttattagaa cacgaggctgaaatttggccaaaacctaaaaacaattaagaacaatctga gcctcagctttcagaaattattaaaaCACTAATTCTAacagattttaaca gatttctaagtaaagaaactaagcggcTAAGAACATcacaagaacattta agcctggaaaattgcaaaaattaagaacagcccagcctgagccagaattt actggttcttataaaaatgcgtgtaatttctataatttaatttcattttc aataatataataactaatctaaattataagtttttAGAATCTTAGTCCCT ATCAAGGAATAGATTGGCCATAGGGCTTCAAAGGACATTAAAGGATACAT TGAAATTTATATTCCCGTAAGTGCGAAATCCTCGTTAAATACTTTGGGAA TGCTTTCTACAATGGAGATCAATTCTACTAAATTAtagacatttttataa gcatactgctaacaagcatatccaGACTGATCTCttggaaaaattaaaca ttGCCTATAAAGCATATGCTGAGCCTCAGTTAACaaagttttaaataatt taatctcctaaatcacaaaaaaaaaacatgtgtaAATTGCACTATTTAAA ATACCCTTATACATAAGTATAAAAAATTGTGTGATCCCTTTGCGAgtttg agagagagagagagagagcaaaCTTTCAATGTTTGGGAAACTGGAATTGA TTCCTCACATCGTCGTCAAAAAGGTTCAACTTATataccgggtgtttcaa aactatttctaatatatttttgataattaaaaCAAGACTCTCGAATCCGA GTGGTAAGTCAAAGCtcctagaaaaaagtcaaaaagtttcttgaatgggc ggatggtGGAACAAAATTATGGGCGGTGGGGTTTTAGGGAAGATTAAAGC GCCTGAGGGTATTAGCCggtattataaatataaaaactaatgaagtacaa aatatgaaaaatataaaaatactgtataataaattaaaaaattatgcaaa tcactctaaaaaGATGACACTATGAATAATGAAAGCTATGCCAAATAAAC TCTTTTGTGCTCAATTATAGGGGAGGGTAGAAAAACCATAAAGTACAAGT CATTATTAAAAACTGATATTAAgatgattttacaaaaatgccCTAGTCTG AAAAAACGTCCCACCTACtttgtaatttaaaaaaaaaaattgtggactcc aacattttgacaaaattaatttcagggGTAAACCAAAAGTCtctccattt tctcaatttaacaTATTCTGGGATATTTTGAATGCTTTTGAAGAATACTT TCAAACCTTAAACACATTATCCAACGAAAAATCTACACAGTAAAAGAAGC ATAAATCTGAACAAGACCGAAAATTTTTAAACTCCACCTTGTTATTCAGA CCCccacttttattagattttgcaatattttatcataatttataaTATAC TTGGGACCTAGAGTAGtcgaaaatgaaggtttttaagcccttttcagaaa aaattcataaaatgggagggggtcttataaaattatattacagtgatatt ttccaaaaatatgacccacaatCTCACTCCAGTCCTCAGTTTAGTTGTTC ACTTATTAGACTGAGGTTATTGTGATATACAATGGTACAGTATTGTTAAT CCCTTGAAGATGGTACAGATTGACTCTTACAATTAAGCATTAAAGAGTAC AAGAATACCTTCTATCATTCAGCAACCAATTATTGCAATGAAAATATTAC CAAGTTATTATTTTCGAAGTTGAAACGAACTACCACATGAAGCATATAAA TATCTTGATTGCATGGCAGCAacatacatttttgttttgcagcATCGTTT TTCAAGTGCATTTCAAAATCAGCCAGTAACTGTCCTTACGTCATGACCCT aataaaacaaatagaaattgaatCAGTATTGAAATCCAGGCATACAAAAT GGTGTATTATAACTAAAAGAGGTTTGTAAAATTGTTGATAAGTTATTTAC AGCTTTCAGTAGACTATAGTAGAAAGACCCTTTAGTAAGACAAATTATTC AGattgtttttctatttctaaagagttccaaaaaaggttacaaaaaccta ttttcaaaaatattttgaacttaggTCAAGACTTTGTGTACTgtaacaaa attttagcttctttTGATGTACAATGGAATAGTATCATCAATAGTCTTGT ATTACTGGattatattacaaaaaatacttaccgtgttgtattttgttcct tgttcaatggataaaatgaatctattttcaatgaaatcccCAAAACTTCA ATGGCTCAATGTCGACACACATTCAATGTATCCTATAAACAtgaaagttt tatgaaaatttgacaCACTGTAAAGCTTGCCACCTcagagtttaaaaagt aatttctctgttctacacattttttataagcaatcaggCTGCTAAGGCTT GAGGCCTCAAATTTGTCAATGATTTTCCACTATCTCGAAAAGTGACAGCT GTTTTAGATGATCTAACCATGGCAAACTATAGCCCTTTGACCCAATACAC ATAAATATGGTAAAATATTATGGGtattcaaagcaattttttcagaaaat ggacCAGAATGCTAAGTAACCCTAGGCCTGAccagaaaattggagttgct tattaaaaaatgtgtatttaatcatgtcatctttttcagttccatagcaa aaacaaaaacgtcaacatttctttgtttttagactAAAAAACTATGTCTA AAAGGCCTACCTTCAGCTatgttatcatttgatattcCACGTTGAGTTTA ATTTAAcatcattttttacttcaacCATGACAAAATCTTCATTAATTCTA ACAGGGAAGtcagaataagaattttccaaaataaaatgatcTGACAGCTT GCATTCCAACCAACCAACTGTTATTTTATCTCCTGAAAATGGAAAGACAA CTAGTTAAAACAAAAGTGACCAGCTTTGGTCCAGGGGgatcaagcagtta gtacaagacatcatccCAGTTGGTACCTGGTGGTGTGTTATGTGAATTTG ATTTCcttacaaaaatcttaaaattggtTTGCGGTCTGCTTCAAGCCAGC AGGGATGTGCcgttggagtttgaaaagtggaccctgtgaaatatgaattt ttggcaaaattgggACTCTCTGTcagaatgaaaaattgaaaatttttccc attttcaccctgaaaagtggcaaaaattaataaaagtagatgaaaaatta aaagattttcgGATTTCCACCCTAaagattgtccaaaataatcaaaaatc taaatttttgggAACCTTtcatataccgtgagattgggggaagatgataa aaattgaccgtcagtcgaacatggttttttttcatatctacgattttgtg tttccgggggttttgttgtttcgaattgattaactaacagttaggtaggg tcagggttgctagtaacggcttgtcactgtgccgggtgcatactcggcgc cttgggccccgcagggttgctagtaacggctcgaatttcagtcaggttaa aaaaggggcaattttacccatattataataacattacccccgtcttttta gtcattctataagtatttacaaattgtgtgttttgctgtgcgagtgtggc tcaacggatagcgcgctgggtttctgatcagagactctttcatttggtgg gttcgaatcccggtcgggtcgatatttggagaaagtttgaaatatcaaat tcatagaaaagttagtagaaatcagaaaacaagtctcagaaagtcagaaa atagaaaaggagatagagagataggaagtagaaaaacagaagagTGATGT TCGATTGACGGTCAATTTCTATCACCTTCCGAGATTGggcaacttgcatc agtggaggctaacatgcatagctctcGAATGATTGACCTGGctggttggt cattaaaatacaacattaaatcaaaacaaaaatggtagagtactACTAct agcagagctgcgtagttcatttgttttgaaatttttctgatttaatTGGT CAGCCGTCTGATGGCTATGGAGCCTAAAAATGGGACCCTGTCACCAGCAG CGAAacatacccaattttgcctaagtgcctcccCCTGGGAGGCTAATAcc ctgaagtttttcaaaagtaaattgttgtGGAAAATCCACATTGTCCACTG GAGGTTAACAGACTATAACTGGAACTGCccatagctttgaaaagctgtgG TGTAGCCATGTGTATGTATAGTCATACAGACACATACCacacttcaatca tactttttgtgTCAAGACTGGAcacaaaaagtatgattgaagtgtGGTTG ATGattagaaatatataaaaaggagCTCACCTAAGCATCTTTTGATTCCC ATTTCATATCTTTAGAATAAAGTTTCCATTTGCAATGCATTTTGGCTTGC TTTGGTTTGCTGTCTTCCTCATTGCCTTCCACTCCACAACTTCcagtttc aaaaagaaatttgccGGCAATCATCAAtcataacattcgaaaataatcta agtttttttccgggggtttgcaaAAGTACTTCCAATGATGTGGATATTAT ATTTACAGTATTTAACCGTAAACTGTGTATGTAATACACTTAGAACTATT tcattttacaagaaatttagatattttagtATCTTCTTGTGTTTTAAACG TCAAAAATTATGCTTCAGATAGTCTTTTTGATCCCCGGTATTCATCAGTG CGGACCTTGGTTCGTAAACGTTTTGGCGCGTCCTTCTTTCAGCAACATGG AAAAACcaagagaagttcatctttcaAGAAGTTGAAAGACGTCGAAATAC GATGAGCgtcgaaattttttctttttttataagaagaaccagaaaatttt ggctcaggctgggctgtcTGGACGGCCtggactgttcttaatttttcgag gtttttaggcttaaatgttcttacgattagtttttttccttaagaaatta aaatggcttaaaatctattaaaattaaaacccattaaaatcagcaaactc gtgttcttttaaaattgttcctataaaaaagcgtgtatttaaaaaatatt aaacattaaacattaaacgtaaaagtgtaaaaGTTCGCCTTTCGAAAAGT TGGAAGACGTCGATATACGAGTTTtagacatctttttgaaaaattgaaag tttctatttcgaaacttttgaaagacagagaagttcatctttcgaaaagt tgaaagacgtcgataaacgacttttcgacatctttttgaaaaattgaaag tttctatttcgaaacttttgaaagacagagaagttcatctttcgaaaagt tgaaagacgtcgataaacgacttttcaacatctttttgaaaaattgaaag ttcatatttcaaaacttttgaaatacagagaagttcgtctttcgaaaaat agaaagttgttggaagatgaattttcaacAaaattcaacaaaCTTGTAAG TTCGTCTTTccaaatcttggaaaaatagAGAAGTTCATCTTCCTAAAAGT CGAAAGACATCGAAAGATGAGCTTCcaatatctttcaacaaatttgaaac ttcatctttcgaaaattttggaaatttgttgaaagttgaTCTTCTCAACA TCTTTCGAAAATGGAAAGACAAGATTTCGCCCAGTGGAACCTAAAAGTAA gcacacccctttctcacagacccggttgtattttttcagccagtgggtat aagaataacggaccaaaactcaatggggatagatATTCTGATGTTCTTTA ATGGCTGGGGATTAGAACtctattgtttttaagtcagcaAATTCAGTGGg ggtggaaaaaatagcacaattattagggcctaaaaattaaagtaggaaat aaaaacaaattcagaaagttgcgtatttttttaaattttctttaagggct ctgaccatagtccaaaaattgattttggtatttgaacatagaagttatat ttcaggttccttaacacttttaacaaagaattgcctttataaattgcttt ttaatcgaatcccttaagagtaattaagaatttaattgcaaaaatgacgt tatgaactttgaaaagatgttaataatatgttgcatcccctcttttacaa aaagtgcttagttttaatgggtaattaacttttttgtttcaaaatttctt tacactgtccgcaaagaattaaaatattttaaattttgcggaaaattttt ctaaaacgatgtgtcaaaagttatcactgttttttaagcaaaatccagat gaaaaattgatgaaaaatcactattttgaagatttcgagacaaagaagca tttacaaaaattttccgcaaaaatttttattgttcagtaaaagatacacc atctactgcgaaaaaattttttaaatgttttttcttcgccgaaactaagc tcttcaaagttgaaatactcttcatcgcaaaagtcttcattttcttcttc gtcaaattttttcaatgcaatttttgaattttcagattcaggaatagttt gcctaacagaaaatgtataacatgccatagttttgttggttacatcagtc agaaaacacattttaaacacggcaattatgaaaaattcactatggtcaga gcctttAAGACAGATTTAATGGGTCATTTGGTCATTCGGGCCTTTATTAT TATGAAGCTCTACTAATTTTGGTGTATtttgttattactttttttatttt ttctctaaCTAACCAGGGAGAATATCAAACCGGCGAGCAAATCGTACCAC AAACTTAC

Coding sequence (CDS) from alignment at sc0000023_pilon:59945..68452+

>XLOC_019151 ID=XLOC_019151|Name=XLOC_019151|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=990bp|location=Sequence derived from alignment at sc0000023_pilon:59945..68452+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTTATGGCACCAATACATCATTGACTTGCCACGATGAAACTCGAAGAAT
GCAAACTCTTGAACCCTATGCCACTTCAATCAGTATGCCTGAAAAAGCTC
TTAGACCTTCTGTTGCAAATGCTGGTAATGTCAAGAACTACAAATTTGAC
GATGGTATGATTGAAGAGGTTTATGGCACCAATACATCATTGACTTGCCA
CGATGAAACTCGAAGAATGCAAACTCTTGAACCCTATGCCACTTCAATCA
GTATGCCTGAAAAAGCTCTTAGACCTTCTGTTGCAAATGCTGGTAATGTC
AAGAACTACAAATTTGACGATGGTATGATTGAAGAGgGCAAAGAGTTGGT
AGAAGCAGGAGAAGAAATCAATTTAACAAGATTAGGTTTGAAGTATCATC
TAATGCACTCCGAGACAAAAAATGTACCCGGACATATCAGTCAAGTCACG
AAAGAAATTCTTCTCGCGAATGGTGTGGACGGTGACAAGATGAAGCTTGG
AGCAACAAGTGGGACGCGTCGTCGTAGGGCCAAAAGAAAgGCAAAGAGTT
GGTAGAAGCAGGAGAAGAAATCAATTTAACAAGATTAGGTTTGAAGTATC
ATCTAATGCACTCCGAGACAAAAAATGTACCCGGACATATCAGTCAAGTC
ACGAAAGAAATTCTTCTCGCGAATGGTGTGGACGGTGACAAGATGAAGCT
TGGAGCAACAAGTGGGACGCGTCGTCGTAGGGCCAAAAGAAAGATTCTCG
ACACCAATATCCCGGTACCGACGGACGAGAGCAGTTCAAAAATCAAGACT
CGCCTCAAAGACGCAGTAAACAATGATTCTCGACACCAATATCCCGGTAC
CGACGGACGAGAGCAGTTCAAAAATCAAGACTCGCCTCAAAGACGCAGTA
AACAATGGAGAATATCAAACCGGCGAGCAAATCGTACCACAAACTTACGG
AGAATATCAAACCGGCGAGCAAATCGTACCACAAACTTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_019151XLOC_019151-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:59945..68452 +
Properties
Property NameValue
Aaloc454-495:8467
Aaloc373-453:775
Aaloc169-369:304
Aaloc1-168:1