|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:73025..76221+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019024 ID=XLOC_019024|Name=XLOC_019024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3197bp|location=Sequence derived from alignment at sc0000376_pilon:73025..76221+ (Clytia hemisphaerica_ch_hm2_pilon)
GTATCAAACTCAGAGAATCTATCGCCTCAAGTATTGAGAACAGTTGCTAA
ACAGCTGCATGTTCTACAAAGTGAACCACCAGAGGGAATCAAAATATTCA
TGAATGAAGGAGATTTGACTGATATACAAGCCTCAATTGAAGGACCATGT
AAGATATacataaaatttgttttgttctaGCTTCCAATGTCTTGTTTTAG
TGTTGATTCTTTAGAGTCAAACTTCTATTTATTTTGAGCTGGACAAATAA
TTCAAATCAAGAGTTTATTTTAATATCAATCAGAATGATATTTTACCTGT
ATAAAACAGTAATGACTTTGTTATGACCCCTTATTTtctattgttaaccg
gttacctttttttttcaaagggctacacagctttttgcgcaattcaattg
gttctttttgcatGACGACAGGCCTACACTAAACatagttgcccgtcgtt
agaaGAATTCATAgggtccaccccccccccagaaatttGGGGGTacctca
aaaaaaaagtgaggggggggCTGTTGTTTTGTATGAGGTCATAGTGGCCA
GCGACCCTTGAATTCCTTGAAACAACCTTGAAAATtgccttgaaaccctt
gaaaaatcaattttatttcggGGACCCTTGAGGTTTAAGATTTATACCCT
TGAGACCcttgaaatgtcaaattttgtggccattttcagccattttactt
tcagaaatacaaaatttttcccacTGCGTGGGATACAAACATCAGTGAAT
TAAAtgagaaaacatacttttgGAGCCCCTGATATTCAAGGGGATTTTCC
AAGATCATTTTTAAGGGGTTTACCCTTCAACCATTATGTGTCACTGGAAT
TATATGAGATTGGCAGGTCTGGATGATAGAATGGGTAgttgtaaaattat
caattatcagcCAATCTAAAGCActgaaaatcaaagattttctccATCGG
CCCCAACTATGGCCCTCCCTTTACCACGACTATAAAGAAAGTATTTGTTG
AAGAATGTTATTGATGTTCTGTTCAAAATCGAGAGGATTAAAAAGACTGA
TTTGTCCGAAAGATTTTAtggtttttttgattttgttatgGAAACCGTCT
TAGGGgtattttatgcattttaagGGAGTTAAGAATTCAaccttgagagt
tgaaaattcaaTCTTTCCCCTATCGTCGACAGCTTTCATTGAAATccttt
aaaactaaaagtttgTGGTAAAAAACCCTTGAAACCCTGGAAAATTAGTC
AAACAtgacccttgaaacccttgaatttgttgaaaaagaagtgGAAGAAG
AAGTTGAAATGGAAGTATTTTcccaggaatgacaaaagagcagaaaatcc
tttgtatttttaacaataaaaagggggtaactcaaagttggggggggggc
tactttAGAATTCCCTGGAGGACCCTATGAAACTCATTTTGACatcattt
tttcgtttttttttgtgctttttttttctgataaagCGTGAAAGATCAAT
TGAAACTGAAGGAAACaattaacaaatacaataatgaccagtttttttCA
TGTTGTTCTGTGAAATATTGCCCTCGATCAACCCAACGACCTCGAAAACT
TGGTCATTGCTTGACCTCTGGCAATATTTCTCAGCCCTCGccaaccggtc
attattgtattagagtAGAGAATTAGTCTTTCTATCAATGTTCTGCGTTT
TTCCAGACACACCATATAAATTGACACTGATTGACAAACAGTCAACCAAA
TTCTTTTGCCATTTAAAATCTACTCATAACATAATAATGTGTTCCTTTTT
TAGTGGGTACACCGTATGAAGGAGGATCTTTCAAGATGAAGCTGGTCCTT
GGTAAAGATTATCCTCAATCTCCTCCAAGAGGTTTGTTTGATACATAATT
GCTATCCATTTATAATGTATATTAAGATATCTTACTTTAAGTGCTTCCTA
AGAAATGATTATTTATTTCTAACTTTCTATCAATATGGATTGTTGTTATa
aaagttgttgttgtttcaatttattaaattatcaccaaaatattcttttt
taggCTATTTCCTTACAAAAATCTTTCATCCCAATGtatcaaaaaatggt
gaaatatGTGTCAATACTTTGAAAAAAGACTGGAAAGCTGATCTAGGACT
TAAACATATTCTCATTGTAAGTTAAGTAGACTCTTAAAATATACACACTC
TTCTAGAGACATATAAGGTGAGACCAacttaatttgttgttctacggtcC
CGACCGACcttattttgctaaaatcaaaaaaataataatattgaatttcc
actaaaaTATATTTCACACACTACTGTAGTTATTTGtaataattaaattt
gaataaagctgaaaattaattcaagaaattgaaaatttagaaaatcaagc
aagcattccatacactaaaattttattatgatcttcatcgaagataaaaa
agtgaacttttgatccagataatttttggaaaatattttcagtaccttat
accaaccctgataaatgaaaaatttattcttattttaacgaccgaccgac
ccatatttttctaacgatctgcccgtagaacaacaaattaaattggtctc
gcctaatatGAAGTTGTGTTCTGCTCTTGCAAAAGTTACgcaacattttt
catttttgcatcaGAAATGCAGACCATTCGTTTATATTCTTAACCAACAC
TTTTGTTGTATTAAGAACAACTGGCGAAACGTACcctgttttgttttgac
aatTTTAAAAACTGAAATGATTTTGTACCATTTTTTACACTGTCAATTTG
GCTTTAAGTAAGGATTTATCTAAATTTGAGTATTTCTCACATTCTCACTT
TTGAATATTTGATTATTATTCTCTTCTAGACTGTGAAATGTTTACTTATA
TACCCTAATCCAGAATCAGCACTCAATGAGGAAGCCGGAAaacttttatt
agaacaatATAGTGAATATTCAAAACAGGCCAAAATGATGACAGAAATAT
ATGCACGTTCGTCAACGAAAACACAATCGAATGATAATGGTAGCTGTAGT
AGTGATGGTAGTAGTTCTTCCAGTtcaagtaaaaacaattctacATCTTC
AACAACAAAAGTAAATAATACTGCAAGTAAAAAACGTGCAGCTGAGAAAG
tggataaaaaaaaacaagacaaGAAACGAGCATTGAAAAGATTgtga Coding sequence (CDS) from alignment at sc0000376_pilon:73025..76221+ >XLOC_019024 ID=XLOC_019024|Name=XLOC_019024|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1314bp|location=Sequence derived from alignment at sc0000376_pilon:73025..76221+ (Clytia hemisphaerica_ch_hm2_pilon)
GTATCAAACTCAGAGAATCTATCGCCTCAAGTATTGAGAACAGTTGCTAA
ACAGCTGCATGTTCTACAAAGTGAACCACCAGAGGGAATCAAAATATTCA
TGAATGAAGGAGATTTGACTGATATACAAGCCTCAATTGAAGGACCATGT
ATCAAACTCAGAGAATCTATCGCCTCAAGTATTGAGAACAGTTGCTAAAC
AGCTGCATGTTCTACAAAGTGAACCACCAGAGGGAATCAAAATATTCATG
AATGAAGGAGATTTGACTGATATACAAGCCTCAATTGAAGGACCATTGGG
TACACCGTATGAAGGAGGATCTTTCAAGATGAAGCTGGTCCTTGGTAAAG
ATTATCCTCAATCTCCTCCAAGAGTGGGTACACCGTATGAAGGAGGATCT
TTCAAGATGAAGCTGGTCCTTGGTAAAGATTATCCTCAATCTCCTCCAAG
AGgCTATTTCCTTACAAAAATCTTTCATCCCAATGtatcaaaaaatggtg
aaatatGTGTCAATACTTTGAAAAAAGACTGGAAAGCTGATCTAGGACTT
AAACATATTCTCATTgCTATTTCCTTACAAAAATCTTTCATCCCAATGta
tcaaaaaatggtgaaatatGTGTCAATACTTTGAAAAAAGACTGGAAAGC
TGATCTAGGACTTAAACATATTCTCATTACTGTGAAATGTTTACTTATAT
ACCCTAATCCAGAATCAGCACTCAATGAGGAAGCCGGAAaacttttatta
gaacaatATAGTGAATATTCAAAACAGGCCAAAATGATGACAGAAATATA
TGCACGTTCGTCAACGAAAACACAATCGAATGATAATGGTAGCTGTAGTA
GTGATGGTAGTAGTTCTTCCAGTtcaagtaaaaacaattctacATCTTCA
ACAACAAAAGTAAATAATACTGCAAGTAAAAAACGTGCAGCTGAGAAAGt
ggataaaaaaaaacaagacaaGAAACGAGCATTGAAAAGATTgtgaACTG
TGAAATGTTTACTTATATACCCTAATCCAGAATCAGCACTCAATGAGGAA
GCCGGAAaacttttattagaacaatATAGTGAATATTCAAAACAGGCCAA
AATGATGACAGAAATATATGCACGTTCGTCAACGAAAACACAATCGAATG
ATAATGGTAGCTGTAGTAGTGATGGTAGTAGTTCTTCCAGTtcaagtaaa
aacaattctacATCTTCAACAACAAAAGTAAATAATACTGCAAGTAAAAA
ACGTGCAGCTGAGAAAGtggataaaaaaaaacaagacaaGAAACGAGCAT
TGAAAAGATTgtga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376_pilon | genome | sc0000376_pilon:73025..76221 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 349-666:2880 |
| Aaloc | 238-348:2056 |
| Aaloc | 160-234:1806 |
| Aaloc | 10-156:1 |
|
