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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000130_pilon:392463..395881+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_019006 ID=XLOC_019006|Name=XLOC_019006|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3419bp|location=Sequence derived from alignment at sc0000130_pilon:392463..395881+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacaaatttctttcactgGAGTGTTGTTGGTATTTTATTCACCTTTTA
TAGTGGATTCATTTCTTGCAATGTTGATCTTTGGAAATGCGCAAACTCTT
TTCTGGACCTACCGACTATTTTCATGAAAGGTCAAGAATATGTGGACGTT
TGTATCCCGTTGCTAGGTGACGTGATGTCCATGTCCCTTGAAGACGCAAA
ATGTGGGACGGGCGTACAACACGCTTGTATCGGTGTTCGATTTTTAAAGA
CGTATAACATCCCACTTTACGCTGGAGTTCATTTCCAAAACGCACCGGAT
GTTGTGCTAGGTTTGAACCGAGTTGGTAATTATCCTAATGGTCGCCCGAT
CGGTAAATCCATCGTGAAAGATGACGGTAGGAATGGTGCAAGTGATGTTG
ATTTGGTTGTCAAGAGAACGAGCGTTGTTGTCAAGGCTGATGGGGACGGT
GTAGTGAAGAAGGAAACATGGTCTGAAGCGGCATGGAGCAATGGTACGTA
ATGGGGTATAGAAATCGCTTTGAATTATATACAACAAATGCACACACTAA
CAATACTCTGCCATCTGAAGCGAGTTTGAACTTAGATGCATTTTAGTGGT
GACTCGAGTTGGAGATTATCGGACGAAAATACCTCTAAATGCCTTTAAAT
AACTGTCTGACCCTTTAAAATGTAAAAGGtgaattttccaaatattttca
gatcGATGTGAAGTGGGAAGCAGTCTTCGTCAACCATGCACATCAGAAAA
CAATCCCACTGTTTGGAGTCGATGTCCACATTCTATATGTTGTTGGGATA
ATTCGAAGAAAGaatgttttcgaaaaattgaagaagGACGATGTGAGTAT
GAAGAGAAGTACTTACTTTACAATATCGTGTTGTCTTGTAGAAGAGTTCA
CTAGAGTTGTTATACCCCTTCGAtttttttCCGATAGGATTGAAAAGTTG
ACTTGGAGAACTCACTGCTTATCGCGAAAGCTCTGTTATTCAgccttctc
gagatgcataaatttattgttgtcctcgttttcaaacagatttcattgct
atGAGATTATACATTTAAACCAATTTAAATTCCCAAAAGGCAAACATTAA
CTCTAAAACAAAAGTACATGAAATTCAAAATGTCTCATGAGGTGTAAACA
ACACAATTATCATTGTGAATATGTAATTTTatagcaatgaaatctgtttg
aaaacgaggacaacaataaatttatgcatctcgagaagagtgtattcagC
CTTCTTTATTCGAATAAATATCTTTTGCGATTTTGCGACTGTAAAATTAA
GAAACTCGAACTTTCGTAAGGTAAGGGACCTAttcataaaatttataaaa
gtcATTGGCAGCTAACAAAtcttagtctacacaatagacagatccaggct
tttaggccttactcttggtctataggcactgctataggcggccactagtg
acccccaccgggaattgcttattaataggtttaaacataatagacaacat
tcacaaaagatgtttatcaatagagattttaaataaaagaatgtttaaaa
cacagctgattggcttaggtttcgaaactctctattgtttcattaaaacc
tcagtgcgcatgcgatttatctggagaatttcaatattcaaaacaagagc
agtgctcatagcccgaagagtaggagttttacgctcgaaacgaaggaaga
tatgacgtagcctaacaAATCTTGGTCGTCTTCCTCTCTGATAGAAAGAT
GATAGTTATACTCTCAACATTGGAATGTCATCCCCCTTTTCAGATTCaca
atgtgacgtcatcaagaaAGAATCACGTGAATCTTGTTCGTTCAAAGGGA
CGAGTCAAGAACGTTGTCAAGCACTTGGTTGTTGCTATGACGACGAGACT
TGCTTCAATCCTATCGGTATGTGAAAACCAGTAGTTTCAGTTCTCCTTTA
AATGCAATTCGATGAAGGTTCTTAGGGTTTTGAGAAATAAAGAAGTTTCT
CGGACGGGTCTTATAAACTCCTCCTCAAAGTAATGTTATTGAAAggactt
tgaaatttttgcatttaGGTTTGACCATCATCGATGGTAGAGCCCTTAAT
TAATACTTGGATAGATTTTGCTTCTTGGTAGATTGACATGGCGAAAAGTC
CAGTGAAGTAATAATTGGATCACATCACCATCATCCAGTCATTCCTTTAT
ATATCGTTAAATGTAaatttttctcgttttcttaagAACGTTGTCAGGTG
GAGGTAAGCGATCGAAAGAGATGTGGTATTGGACAAATGGAAAAATTGTC
GTGTTTTAATTTCGGCTGCTGTTGGTCCAAAGATGAAATATGCTACATGC
CAGCAGGTATGGGACCTTTTATCATGCCCATAGTTGTTAAGTTCTAGGAG
CAATTCATATGACACAAAAGAACTCGTAACTCTTTCTAGGGTATTTAGAC
AAGTCACAACTAAGTTAAATTTTTAACAGCCATAGACAAACTCTGAGCTT
CCAATATGAGAAACAGTGGGATGGTTTGAATAGATAAATGCTCGGTCCAT
GCTAGCCCATTGTAACTTATTTCTAAACTACTATTCTGACTTTTATCACT
CCAGGAAAATTCGGTCACGTTTTCATGAGTGAGCTGAACCAGAAAATCAT
TAGCGGTGCGGAAAACTATTCACCTGATCGACATGTCAAAGGACAGCTCG
TTTATCAATCACTGGTCAAACGGATTAAATCAGCATTGGCGCCTCAAACA
TCCAACCTATTTAACACGTTCGTACAGTATGCAGGCGCCAATATCGCAAG
TATACCTCGTGAAACACAGATTGAGAATATTATGTATAACTGCTTGAACA
CCAAAGGAATTAAACAGAAATATTTAACGACTGATTTTTATTTCATAACG
GGAACGAAACCGATTGACGTTGCGTCATTGGATAAAGAAGAGTTTAATGG
CATGAACGTCCCGCAACTACAATGGTCCGCTATGTGTTGCGTGTTACAGT
TCAAAGAAATGGCTGGCGAAGGTGAAGTTATGGATGAAAAATCATTTGCG
TTTTCACGTGGTTACGTAAGCTCCAATGAAAAACCCGTTAACGCAAAACC
AACCGATGAAACGTCTTCGTTCCACGTATTCCCGAAAGACGGGGACCCGG
CGTTACTTGATCTCGATGAACTTAAAGACGTGATACAGAATTATGCGGAA
GAGAGAACTGACAATCCGATCGATATGACAGTTGAGAGTTTTTTCGGCGC
AGGTTCCATTTGTGATGTGAAAACTAAGAAAACAGTGGATCAAGAGACGC
AAGAGAGAGCTTATTTTGATCAGTTTAAACGGCTAGTTGTTCAACAAGCA
GGTGAAGACACGTTGGCGCCTGGAGAGGCGTTGAAAAGATTGGAGCAATT
CTTTCGTAAAAGTAGTTGA Coding sequence (CDS) from alignment at sc0000130_pilon:392463..395881+ >XLOC_019006 ID=XLOC_019006|Name=XLOC_019006|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000130_pilon:392463..395881+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacaaatttctttcactgGAGTGTTGTTGGTATTTTATTCACCTTTTA
TAGTGGATTCATTTCTTGCAATGTTGATCTTTGGAAATGCGCAAACTCTT
TTCTGGACCTACCGACTATTTTCATGAAAGGTCAAGAATATGTGGACGTT
TGTATCCCGTTGCTAGGTGACGTGATGTCCATGTCCCTTGAAGACGCAAA
ATGTGGGACGGGCGTACAACACGCTTGTATCGGTGTTCGATTTTTAAAGA
CGTATAACATCCCACTTTACGCTGGAGTTCATTTCCAAAACGCACCGGAT
GTTGTGCTAGGTTTGAACCGAGTTGGTAATTATCCTAATGGTCGCCCGAT
CGGTAAATCCATCGTGAAAGATGACGGTAGGAATGGTGCAAGTGATGTTG
ATTTGGTTGTCAAGAGAACGAGCGTTGTTGTCAAGGCTGATGGGGACGGT
GTAGTGAAGAAGGAAACATGGTCTGAAGCGGCATGGAGCAATGatgacaa
atttctttcactgGAGTGTTGTTGGTATTTTATTCACCTTTTATAGTGGA
TTCATTTCTTGCAATGTTGATCTTTGGAAATGCGCAAACTCTTTTCTGGA
CCTACCGACTATTTTCATGAAAGGTCAAGAATATGTGGACGTTTGTATCC
CGTTGCTAGGTGACGTGATGTCCATGTCCCTTGAAGACGCAAAATGTGGG
ACGGGCGTACAACACGCTTGTATCGGTGTTCGATTTTTAAAGACGTATAA
CATCCCACTTTACGCTGGAGTTCATTTCCAAAACGCACCGGATGTTGTGC
TAGGTTTGAACCGAGTTGGTAATTATCCTAATGGTCGCCCGATCGGTAAA
TCCATCGTGAAAGATGACGGTAGGAATGGTGCAAGTGATGTTGATTTGGT
TGTCAAGAGAACGAGCGTTGTTGTCAAGGCTGATGGGGACGGTGTAGTGA
AGAAGGAAACATGGTCTGAAGCGGCATGGAGCAATGatcGATGTGAAGTG
GGAAGCAGTCTTCGTCAACCATGCACATCAGAAAACAATCCCACTGTTTG
GAGTCGATGTCCACATTCTATATGTTGTTGGGATAATTCGAAGAAAGaat
gttttcgaaaaattgaagaagGACGATatcGATGTGAAGTGGGAAGCAGT
CTTCGTCAACCATGCACATCAGAAAACAATCCCACTGTTTGGAGTCGATG
TCCACATTCTATATGTTGTTGGGATAATTCGAAGAAAGaatgttttcgaa
aaattgaagaagGACGATATTCacaatgtgacgtcatcaagaaAGAATCA
CGTGAATCTTGTTCGTTCAAAGGGACGAGTCAAGAACGTTGTCAAGCACT
TGGTTGTTGCTATGACGACGAGACTTGCTTCAATCCTATCGATTCacaat
gtgacgtcatcaagaaAGAATCACGTGAATCTTGTTCGTTCAAAGGGACG
AGTCAAGAACGTTGTCAAGCACTTGGTTGTTGCTATGACGACGAGACTTG
CTTCAATCCTATCGAACGTTGTCAGGTGGAGGTAAGCGATCGAAAGAGAT
GTGGTATTGGACAAATGGAAAAATTGTCGTGTTTTAATTTCGGCTGCTGT
TGGTCCAAAGATGAAATATGCTACATGCCAGCAGAACGTTGTCAGGTGGA
GGTAAGCGATCGAAAGAGATGTGGTATTGGACAAATGGAAAAATTGTCGT
GTTTTAATTTCGGCTGCTGTTGGTCCAAAGATGAAATATGCTACATGCCA
GCAGGAAAATTCGGTCACGTTTTCATGAGTGAGCTGAACCAGAAAATCAT
TAGCGGTGCGGAAAACTATTCACCTGATCGACATGTCAAAGGACAGCTCG
TTTATCAATCACTGGTCAAACGGATTAAATCAGCATTGGCGCCTCAAACA
TCCAACCTATTTAACACGTTCGTACAGTATGCAGGCGCCAATATCGCAAG
TATACCTCGTGAAACACAGATTGAGAATATTATGTATAACTGCTTGAACA
CCAAAGGAATTAAACAGAAATATTTAACGACTGATTTTTATTTCATAACG
GGAACGAAACCGATTGACGTTGCGTCATTGGATAAAGAAGAGTTTAATGG
CATGAACGTCCCGCAACTACAATGGTCCGCTATGTGTTGCGTGTTACAGT
TCAAAGAAATGGCTGGCGAAGGTGAAGTTATGGATGAAAAATCATTTGCG
TTTTCACGTGGTTACGTAAGCTCCAATGAAAAACCCGTTAACGCAAAACC
AACCGATGAAACGTCTTCGTTCCACGTATTCCCGAAAGACGGGGACCCGG
CGTTACTTGATCTCGATGAACTTAAAGACGTGATACAGAATTATGCGGAA
GAGAGAACTGACAATCCGATCGATATGACAGTTGAGAGTTTTTTCGGCGC
AGGTTCCATTTGTGATGTGAAAACTAAGAAAACAGTGGATCAAGAGACGC
AAGAGAGAGCTTATTTTGATCAGTTTAAACGGCTAGTTGTTCAACAAGCA
GGTGAAGACACGTTGGCGCCTGGAGAGGCGTTGAAAAGATTGGAGCAATT
CTTTCGTAAAAGTAGTTGAGAAAATTCGGTCACGTTTTCATGAGTGAGCT
GAACCAGAAAATCATTAGCGGTGCGGAAAACTATTCACCTGATCGACATG
TCAAAGGACAGCTCGTTTATCAATCACTGGTCAAACGGATTAAATCAGCA
TTGGCGCCTCAAACATCCAACCTATTTAACACGTTCGTACAGTATGCAGG
CGCCAATATCGCAAGTATACCTCGTGAAACACAGATTGAGAATATTATGT
ATAACTGCTTGAACACCAAAGGAATTAAACAGAAATATTTAACGACTGAT
TTTTATTTCATAACGGGAACGAAACCGATTGACGTTGCGTCATTGGATAA
AGAAGAGTTTAATGGCATGAACGTCCCGCAACTACAATGGTCCGCTATGT
GTTGCGTGTTACAGTTCAAAGAAATGGCTGGCGAAGGTGAAGTTATGGAT
GAAAAATCATTTGCGTTTTCACGTGGTTACGTAAGCTCCAATGAAAAACC
CGTTAACGCAAAACCAACCGATGAAACGTCTTCGTTCCACGTATTCCCGA
AAGACGGGGACCCGGCGTTACTTGATCTCGATGAACTTAAAGACGTGATA
CAGAATTATGCGGAAGAGAGAACTGACAATCCGATCGATATGACAGTTGA
GAGTTTTTTCGGCGCAGGTTCCATTTGTGATGTGAAAACTAAGAAAACAG
TGGATCAAGAGACGCAAGAGAGAGCTTATTTTGATCAGTTTAAACGGCTA
GTTGTTCAACAAGCAGGTGAAGACACGTTGGCGCCTGGAGAGGCGTTGAA
AAGATTGGAGCAATTCTTTCGTAAAAGTAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000130_pilon | genome | sc0000130_pilon:392463..395881 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 880-1692:2607 |
| Aaloc | 760-876:2239 |
| Aaloc | 637-756:1796 |
| Aaloc | 496-633:704 |
| Aaloc | 1-492:1 |
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