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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000107_pilon:495768..497507+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018783 ID=XLOC_018783|Name=XLOC_018783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1740bp|location=Sequence derived from alignment at sc0000107_pilon:495768..497507+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaatTTGATGACGACATCGATTGTTTCCAAGACAACTTTGAAGAAGA
GGAATGGAACGAATCTTTGCTTGATGTCCCAAATACATGTCTCGATGTCA
ACATCACACCAAATCGTACAAAATGTCACGAACGTTGCATCATTCATATT
GATattgattgtttttatgctCAAGTTGAGATGATCAAAAATCCAGGACT
GCGTGATAAACCGATAGGCGTTAAGCAGAAAAATCTGGTAGTGACTACAA
ACTATGCCGCCCGTAATGCGGGCGTTCCGAAAAGTTGCTGGATTCCGGAA
GCAATGAGAGCCTGTCcggatttgattttgataaacgGTGAAGATTTACA
CGATTATCGACAATATTCGCAAaagatttttgatgttttgaaatCATTCA
AAGTTCCAGTTGAGAAATTGGGTATGGATGAGAACTATATGGATGTGACT
AAGCTAGTTGAAAAAGAAGTTGGAATCCAAGCTATGTTGCAGGGACATTA
CTTATTTAGTCCTGATGAGAAAGTCTGCATTTGTGGTTGTGACGAAAGAC
TTAAAATAGCTTCAAACATAGCTCAAAAAGTTCGTTCAAAATTATACGAA
GAACTATCGATTACGTCATCAGCTGGTATCGGTCATAACAAATTGTTAGC
GAAAATGGTCGGTAGTCGGCACAAACCGAACGATCAAACGACTATTTTTC
CGTGCGATATCAACAAATTTTTAATGGAATTTGACGACGTTAAGAAACTG
CCTGGTATTGGGTctgcaatggtttcaaaattgaaagaacATGAACTCAG
TAAAATAAGTGCTGTTCAACAAACTTCAAAGCAACTACTTTGTGAGATTT
TTGATTCCACAACTGCTAACAAAATATGGGATTTTTGTCACGGTGTTGAT
GACACTGAGGTTAAAATGTCTCTACCATCCAAAAGTATTGGTGTTGAAGA
TCGTTTTAAAGGGATTACTAATCGAGACCAAAGTGTCAAACATATGGAAT
GGTTACTTGATCGTTTGTCGTTACTTTTGCACGAAGATGGCCGACTACCG
AGCGTTCTTCGTATAACAGCACGTGACCATAACAAAGCGAAAGTTGTCAA
CAAGTTCATGAGAGAATCACGACAGACGAAAATCTCACCTGAACTTTTCC
GCTCATTATCCAACGATAAGACACTCGAAATTAAAGCGCGATCTAAAGTT
CTTTCAATGGCTGTCGATCTACTTGGTAAAATGATACAATTGGATTCTAA
ATTTCATATGACTTTATTGGGTATATCAGTAACTGGTTTTAATGAGATTA
CTAATAAAAACATTGTATCATTTTTCAAACAGCCTACAAGCACTTCTACT
GGGTTACCTTTTTCCAATGGAGTTTCAAACCCTTCGAAAAAGCGTTCAAC
ACCTGAATCCACACTAAACCAACCTGCTTCCAAACAAGCACGCGTTTCGG
ACGGAAAGTGTACGTCGAATAATGCTGTTGagagcaaaacaaactttttt
cgtAAGTCGAACAAAACGAAAAACGATAGAGAGAACACATCAAATTCGTC
CCGTAACCTGCAACCTGAAATTCCATTCGGTTGGGATAAAGACGTTTTTA
AGGAGCTTCCATCTGATATTCAACAAGAACTCTTAGCTTCGAATCAAGTT
CGACCATTGTCTAATAAGAAAGTGCTAtcaccaaaaaaagaaaaaccgaa
aaagaaaaataatttatacaattattttggtaaaaattaa Coding sequence (CDS) from alignment at sc0000107_pilon:495768..497507+ >XLOC_018783 ID=XLOC_018783|Name=XLOC_018783|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000107_pilon:495768..497507+ (Clytia hemisphaerica_ch_hm2_pilon)
atggaatTTGATGACGACATCGATTGTTTCCAAGACAACTTTGAAGAAGA
GGAATGGAACGAATCTTTGCTTGATGTCCCAAATACATGTCTCGATGTCA
ACATCACACCAAATCGTACAAAATGTCACGAACGTTGCATCATTCATATT
GATattgattgtttttatgctCAAGTTGAGATGATCAAAAATCCAGGACT
GCGTGATAAACCGATAGGCGTTAAGCAGAAAAATCTGGTAGTGACTACAA
ACTATGCCGCCCGTAATGCGGGCGTTCCGAAAAGTTGCTGGATTCCGGAA
GCAATGAGAGCCTGTCcggatttgattttgataaacgGTGAAGATTTACA
CGATTATCGACAATATTCGCAAaagatttttgatgttttgaaatCATTCA
AAGTTCCAGTTGAGAAATTGGGTATGGATGAGAACTATATGGATGTGACT
AAGCTAGTTGAAAAAGAAGTTGGAATCCAAGCTATGTTGCAGGGACATTA
CTTATTTAGTCCTGATGAGAAAGTCTGCATTTGTGGTTGTGACGAAAGAC
TTAAAATAGCTTCAAACATAGCTCAAAAAGTTCGTTCAAAATTATACGAA
GAACTATCGATTACGTCATCAGCTGGTATCGGTCATAACAAATTGTTAGC
GAAAATGGTCGGTAGTCGGCACAAACCGAACGATCAAACGACTATTTTTC
CGTGCGATATCAACAAATTTTTAATGGAATTTGACGACGTTAAGAAACTG
CCTGGTATTGGGTctgcaatggtttcaaaattgaaagaacATGAACTCAG
TAAAATAAGTGCTGTTCAACAAACTTCAAAGCAACTACTTTGTGAGATTT
TTGATTCCACAACTGCTAACAAAATATGGGATTTTTGTCACGGTGTTGAT
GACACTGAGGTTAAAATGTCTCTACCATCCAAAAGTATTGGTGTTGAAGA
TCGTTTTAAAGGGATTACTAATCGAGACCAAAGTGTCAAACATATGGAAT
GGTTACTTGATCGTTTGTCGTTACTTTTGCACGAAGATGGCCGACTACCG
AGCGTTCTTCGTATAACAGCACGTGACCATAACAAAGCGAAAGTTGTCAA
CAAGTTCATGAGAGAATCACGACAGACGAAAATCTCACCTGAACTTTTCC
GCTCATTATCCAACGATAAGACACTCGAAATTAAAGCGCGATCTAAAGTT
CTTTCAATGGCTGTCGATCTACTTGGTAAAATGATACAATTGGATTCTAA
ATTTCATATGACTTTATTGGGTATATCAGTAACTGGTTTTAATGAGATTA
CTAATAAAAACATTGTATCATTTTTCAAACAGCCTACAAGCACTTCTACT
GGGTTACCTTTTTCCAATGGAGTTTCAAACCCTTCGAAAAAGCGTTCAAC
ACCTGAATCCACACTAAACCAACCTGCTTCCAAACAAGCACGCGTTTCGG
ACGGAAAGTGTACGTCGAATAATGCTGTTGagagcaaaacaaactttttt
cgtAAGTCGAACAAAACGAAAAACGATAGAGAGAACACATCAAATTCGTC
CCGTAACCTGCAACCTGAAATTCCATTCGGTTGGGATAAAGACGTTTTTA
AGGAGCTTCCATCTGATATTCAACAAGAACTCTTAGCTTCGAATCAAGTT
CGACCATTGTCTAATAAGAAAGTGCTAtcaccaaaaaaagaaaaaccgaa
aaagaaaaataatttatacaattattttggtaaaaattaaatggaatTTG
ATGACGACATCGATTGTTTCCAAGACAACTTTGAAGAAGAGGAATGGAAC
GAATCTTTGCTTGATGTCCCAAATACATGTCTCGATGTCAACATCACACC
AAATCGTACAAAATGTCACGAACGTTGCATCATTCATATTGATattgatt
gtttttatgctCAAGTTGAGATGATCAAAAATCCAGGACTGCGTGATAAA
CCGATAGGCGTTAAGCAGAAAAATCTGGTAGTGACTACAAACTATGCCGC
CCGTAATGCGGGCGTTCCGAAAAGTTGCTGGATTCCGGAAGCAATGAGAG
CCTGTCcggatttgattttgataaacgGTGAAGATTTACACGATTATCGA
CAATATTCGCAAaagatttttgatgttttgaaatCATTCAAAGTTCCAGT
TGAGAAATTGGGTATGGATGAGAACTATATGGATGTGACTAAGCTAGTTG
AAAAAGAAGTTGGAATCCAAGCTATGTTGCAGGGACATTACTTATTTAGT
CCTGATGAGAAAGTCTGCATTTGTGGTTGTGACGAAAGACTTAAAATAGC
TTCAAACATAGCTCAAAAAGTTCGTTCAAAATTATACGAAGAACTATCGA
TTACGTCATCAGCTGGTATCGGTCATAACAAATTGTTAGCGAAAATGGTC
GGTAGTCGGCACAAACCGAACGATCAAACGACTATTTTTCCGTGCGATAT
CAACAAATTTTTAATGGAATTTGACGACGTTAAGAAACTGCCTGGTATTG
GGTctgcaatggtttcaaaattgaaagaacATGAACTCAGTAAAATAAGT
GCTGTTCAACAAACTTCAAAGCAACTACTTTGTGAGATTTTTGATTCCAC
AACTGCTAACAAAATATGGGATTTTTGTCACGGTGTTGATGACACTGAGG
TTAAAATGTCTCTACCATCCAAAAGTATTGGTGTTGAAGATCGTTTTAAA
GGGATTACTAATCGAGACCAAAGTGTCAAACATATGGAATGGTTACTTGA
TCGTTTGTCGTTACTTTTGCACGAAGATGGCCGACTACCGAGCGTTCTTC
GTATAACAGCACGTGACCATAACAAAGCGAAAGTTGTCAACAAGTTCATG
AGAGAATCACGACAGACGAAAATCTCACCTGAACTTTTCCGCTCATTATC
CAACGATAAGACACTCGAAATTAAAGCGCGATCTAAAGTTCTTTCAATGG
CTGTCGATCTACTTGGTAAAATGATACAATTGGATTCTAAATTTCATATG
ACTTTATTGGGTATATCAGTAACTGGTTTTAATGAGATTACTAATAAAAA
CATTGTATCATTTTTCAAACAGCCTACAAGCACTTCTACTGGGTTACCTT
TTTCCAATGGAGTTTCAAACCCTTCGAAAAAGCGTTCAACACCTGAATCC
ACACTAAACCAACCTGCTTCCAAACAAGCACGCGTTTCGGACGGAAAGTG
TACGTCGAATAATGCTGTTGagagcaaaacaaacttttttcgtAAGTCGA
ACAAAACGAAAAACGATAGAGAGAACACATCAAATTCGTCCCGTAACCTG
CAACCTGAAATTCCATTCGGTTGGGATAAAGACGTTTTTAAGGAGCTTCC
ATCTGATATTCAACAAGAACTCTTAGCTTCGAATCAAGTTCGACCATTGT
CTAATAAGAAAGTGCTAtcaccaaaaaaagaaaaaccgaaaaagaaaaat
aatttatacaattattttggtaaaaattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000107_pilon | genome | sc0000107_pilon:495768..497507 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1740:1 |
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