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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000332_pilon:259992..263553- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018701 ID=XLOC_018701|Name=XLOC_018701|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3562bp|location=Sequence derived from alignment at sc0000332_pilon:259992..263553- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGTACATTGGACTACAGCAACATGCTCCTTAATAATATGGGGTAA
ATTGCTTGAAATAGAGGGAAATGGCATTCCTATTGATCAAGCATTTTGCA
GGAGGTTCACAAAGGAGATCAAAGATTACAGCAAGAAAATGAACTTTTTG
AATCGTTGCGTGAACGAAGGCGGTAATTTGACCAAACAACGTATCAGAGA
AATCATGAAGGACTTAAAGGTAAGATTGGGAAAATGGTGCGTGAAAGGTG
TGAGGATTACTGCGTTTTTTTCGCACTAAACTGTTTTTTATTAAAACCTT
GAAATTTGAATTGAGGTACAAACTGTTTGCACTTTAAATCTCAAACTGTT
CTTATTTTGTTATCATCTTTTGTGGGCATTTTAGGTCATTTTTTTCCTTT
CCATATGTTTCTACCTAATCGACAAAAAATAAACATTCCTGCCTTGGGCT
TGTGCTTTAATTGTTCCTTATTTTTTGGCCATTTTGAGCCTCATTGTTGT
TCTTATAAAATTGTTGTTATATAAAAAACGATTTAAGTTTGCAAGCAAGT
TTTCAAAATATTACTATATTATTTGAAATCTGAAAAGTCAACAAATTGAA
CTAGACTTTTTTTAGCGGTATTGTTTTCTTTACCTGAAGGAAGAAGTTTC
GGTTGACATTGGAGAAGATGAAAATTATTTGATCAAAGAGCTTCAGCTGA
AAAATAGAAAGGTAAAACTAAACTCTAAACTATATTGTAACTATACAAAT
TGAACCCAATATACACCCCCTTCTCACAGACCCGGTGGAAAATTTTTGAC
CAGTGGGGATAAAATTAAGGAACTAAATTCCAATGGGGATAGAAATTCCT
TTCTTTTTTATGATCGGGGATTTGAATTCTATTGTTTTAACTACAAAAAA
ACCAAAATTTTTCGAGGGGGATAGCATTCTTTGTTATTTTCCACCGGGGA
CAAAAATTCTGGGGTTATTTTCCACCGGGGACGATTTTTGGGGCTATTTT
TCCAGTGGGGCGGGGGTCCCACCGGGGCTGTGAGAAGGGGGTGTCAATAT
GTGGTAGATAAAACTTTTATCTTCTTTTTCTTATCATATGGAAAGTTTCA
TACAAGATCAAACCTAATGATATGGACAACGACAATAAAGGTCGCATTTG
ACAGAAGTAGGAATAGGATGAATGCAAAATTAGGAACTTACCTTTCGCTT
TTGAGCAACTTCGTCACTTTAACTAAACAGTTTTTATATAAAAATCAGTT
GTATCGAGAGAAACCTCGTAATTCTTTTTTTTTTCGATTTTAGCCTTGAA
ATATTCATAATCCTACCTCGGTTAGGGGAGGGGGAGGGACGAAACACCCC
CCCTGAAATATTTTTTGAATAACCTTTATCAAGGAATTGTTATACAGTCT
TGAAACTTTAGAACAATTTCTAATCTTTTATTTTGACAAACTTTCATGGA
AAAACTTATTTTCGTCTGCTCGCTTACGTGAAAAAAAAATACTTTTTCAG
TAAAATCCACTGTATTTATCGCCAGTTTTTTAATTAAAATACATTTTGAT
AGGATAATGCTACATAAAAATTTGACAGAAGTGGCTCGACAAAATTGAAA
AAAATATATTTACTCATCAAACTCTATTTCTTTACTCTATTTCTTTTTGT
TCAATTTTAGCTCCAGATAAAATTGGCTGAAGAGAAATCAAAAAATGAAA
AGTTGAGAAAATGTATTGTTGCAGTAAGTCCAGTCATAACTTTTTACATT
ATATTTCATTATCAATTTTAGTGCTGCTGCAAGGGAATCTGACTCAAGTG
GCTGGCTTTTCAGATTACACCAAGGCACATTTTTTATAATAAATATATGC
TATGTGAAGCAACAGTGTTTTACTAGTAGTATAACAGGGTGTTAAATACT
GACAGCTTCAGATAGTATATCATATATGCTATCGATCATATATGCTACTA
TATCATCGAAAAACGGAGTGGTGTGGCGCCTTGAGTAAGCACTCACTGGT
GCCCAGGGGCCACCTGAGTATCTCTATCATGTGGTGCATTCAAGCTTTAT
GAAAATTAGTTACCGTGAAAATAAGTTTCCCTAGGTATTCGAATTGAATT
CAATCACAAACTAAAACATTTACTTGCATTTTATTTTAGCTTGAAGGAAC
ATGCAATAAATTGACCACCCGCATCACAAGTTTAGAAACGCTAAACAATG
TACAGAAATGTCAATCGAAAAAGGTAAAAAACTTCATCCATTTTACTTTG
CACAGTAACATACTCGCTGCTTTCCCATAGCTTGATGTCCATTATGGAAC
TATTGGTTCTGTTTTTTACAGAGATTACGAAAAGATTTGGAAATTTCTGC
AATAAAAGTGGAAAGTTTTTTCTTGAAAATGCAATTATTTTGAAGATTTC
TTTTAGATGTCTTTGTATGATGCTTTTTCATAAAAGTCAGGCAATTTTAC
CTATATAATTTTCTTTCGTGTCTTTTAGAAAAGAGACGAATATCGCAGAT
CAGAGCTGGCAATGCAAGAAGAAGTCACCAGACTGGCAGAACTTACTGTG
AAATACGATCAAAATGAGCTCTTCTTAAGATCAAAATTAGTAAGTTTGTT
TGATTTTCACCTGGCTTGTACTACATGGCATTAATTTCATTAGTAAATGA
CTAAATAATACAACTTTCTTTGACCAAAGAAAACATTTTAAGCGATTTGA
GAGGAGAATATTTAAATAAAGGAAAAATTGTTAATCAAAATAACTTTATG
ATGAAACTCTCTAACACTATGAAAGTAGTGCATTTTATTGACTGACAAAA
ACTTTATTATTTACAGGTGGAAGCTGAAAAAGAAAATGTCAAGAGTTCGT
GGACAATTGATGATTTAAAGAAAAAACGCAAGTCCATTGAGGTATTAGAA
TATAATCACATTATTAGACAAAGAAAGTAGAGACTTCCATCCTATCCATG
CTAATTTCTTCACTGCGATAGTAAAAAGGTTCAGTAAAAATGGAAATGAT
TTATGTCAGTATTTTGAGACTTTCATCCACTTATCAGAGGACTAAATTTT
ACGAAACTATATTTCCAATTACCTGTTAGTGAATTTTTCACCAAAATTAA
ACACTATCTAGACCTCTTGGAACTACAGTAGAGACCAAAGAGAAAAATAA
TTTTTTTGGTAAAAGAATGATGCTTTGTAAACCTGCAATGTTTTTCTAAC
TTTTTCAGGATAAAGGGCAACCATCGCCAAAGCGGAGTAAACCGCCAGCA
GAATTAGTTAATGAAAGACGGTTGGCAATTATTCAAGAGTTTGAAAACGA
TCTGAACAACAAACGGTCTGATCACGAGGAGATAAACGACGAGAGAGGAA
ATATTGTGGAGTTTGAAGTTGAAACAGGTAGTGGGCCGAGTGAAGATATG
AACGAGCGGAGCGAAGATGTGAACGATGAAACCGAGCAGAGCGAAGAGAT
AATTGAACCAGAAAATGAAGAAGAGAATTTTGACTTTACCGGTCCGTATG
TAGAAGGAGAGCTGCTCGCGGGAATGAACAATGGAAAAGCCGTCCTTATT
GAAGTTACAAGT Coding sequence (CDS) from alignment at sc0000332_pilon:259992..263553- >XLOC_018701 ID=XLOC_018701|Name=XLOC_018701|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1956bp|location=Sequence derived from alignment at sc0000332_pilon:259992..263553- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGTACATTGGACTACAGCAACATGCTCCTTAATAATATGGGGTAA
ATTGCTTGAAATAGAGGGAAATGGCATTCCTATTGATCAAGCATTTTGCA
GGAGGTTCACAAAGGAGATCAAAGATTACAGCAAGAAAATGAACTTTTTG
AATCGTTGCGTGAACGAAGGCGGTAATTTGACCAAACAACGTATCAGAGA
AATCATGAAGGACTTAAAGATGTTTGTACATTGGACTACAGCAACATGCT
CCTTAATAATATGGGGTAAATTGCTTGAAATAGAGGGAAATGGCATTCCT
ATTGATCAAGCATTTTGCAGGAGGTTCACAAAGGAGATCAAAGATTACAG
CAAGAAAATGAACTTTTTGAATCGTTGCGTGAACGAAGGCGGTAATTTGA
CCAAACAACGTATCAGAGAAATCATGAAGGACTTAAAGGAAGAAGTTTCG
GTTGACATTGGAGAAGATGAAAATTATTTGATCAAAGAGCTTCAGCTGAA
AAATAGAAAGGAAGAAGTTTCGGTTGACATTGGAGAAGATGAAAATTATT
TGATCAAAGAGCTTCAGCTGAAAAATAGAAAGCTCCAGATAAAATTGGCT
GAAGAGAAATCAAAAAATGAAAAGTTGAGAAAATGTATTGTTGCACTCCA
GATAAAATTGGCTGAAGAGAAATCAAAAAATGAAAAGTTGAGAAAATGTA
TTGTTGCACTTGAAGGAACATGCAATAAATTGACCACCCGCATCACAAGT
TTAGAAACGCTAAACAATGTACAGAAATGTCAATCGAAAAAGCTTGAAGG
AACATGCAATAAATTGACCACCCGCATCACAAGTTTAGAAACGCTAAACA
ATGTACAGAAATGTCAATCGAAAAAGAAAAGAGACGAATATCGCAGATCA
GAGCTGGCAATGCAAGAAGAAGTCACCAGACTGGCAGAACTTACTGTGAA
ATACGATCAAAATGAGCTCTTCTTAAGATCAAAATTAAAAAGAGACGAAT
ATCGCAGATCAGAGCTGGCAATGCAAGAAGAAGTCACCAGACTGGCAGAA
CTTACTGTGAAATACGATCAAAATGAGCTCTTCTTAAGATCAAAATTAGT
GGAAGCTGAAAAAGAAAATGTCAAGAGTTCGTGGACAATTGATGATTTAA
AGAAAAAACGCAAGTCCATTGAGGTGGAAGCTGAAAAAGAAAATGTCAAG
AGTTCGTGGACAATTGATGATTTAAAGAAAAAACGCAAGTCCATTGAGGA
TAAAGGGCAACCATCGCCAAAGCGGAGTAAACCGCCAGCAGAATTAGTTA
ATGAAAGACGGTTGGCAATTATTCAAGAGTTTGAAAACGATCTGAACAAC
AAACGGTCTGATCACGAGGAGATAAACGACGAGAGAGGAAATATTGTGGA
GTTTGAAGTTGAAACAGGTAGTGGGCCGAGTGAAGATATGAACGAGCGGA
GCGAAGATGTGAACGATGAAACCGAGCAGAGCGAAGAGATAATTGAACCA
GAAAATGAAGAAGAGAATTTTGACTTTACCGGTCCGTATGTAGAAGGAGA
GCTGCTCGCGGGAATGAACAATGGAAAAGCCGTCCTTATTGAAGTTACAA
GTGATAAAGGGCAACCATCGCCAAAGCGGAGTAAACCGCCAGCAGAATTA
GTTAATGAAAGACGGTTGGCAATTATTCAAGAGTTTGAAAACGATCTGAA
CAACAAACGGTCTGATCACGAGGAGATAAACGACGAGAGAGGAAATATTG
TGGAGTTTGAAGTTGAAACAGGTAGTGGGCCGAGTGAAGATATGAACGAG
CGGAGCGAAGATGTGAACGATGAAACCGAGCAGAGCGAAGAGATAATTGA
ACCAGAAAATGAAGAAGAGAATTTTGACTTTACCGGTCCGTATGTAGAAG
GAGAGCTGCTCGCGGGAATGAACAATGGAAAAGCCGTCCTTATTGAAGTT
ACAAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000332_pilon | genome | sc0000332_pilon:259992..263553 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 625-978:355 |
| Aaloc | 550-624:747 |
| Aaloc | 439-549:1085 |
| Aaloc | 355-438:1424 |
| Aaloc | 292-354:1903 |
| Aaloc | 220-291:2924 |
| Aaloc | 1-219:3563 |
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