XLOC_018644.3 (mRNA) -

Overview
NameXLOC_018644.3
Unique NameXLOC_018644.3
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000242_pilon:462402..463800-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018644.3 ID=XLOC_018644.3|Name=XLOC_018644.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1399bp|location=Sequence derived from alignment at sc0000242_pilon:462402..463800- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCGACTAGTTGAAATTCTTATACGATGGTCGCTACATCATACAGC CTTCCACACTGACATTAGGAAGATGTATAATTCAGTTCGTCTTCGTGAAC ATCATTGGTGCCTACAACGATATATCTGGGAGGAACAACTTGACAAAACC AAAATCCCAAAAGAGAAAGTCATAAAGACATTGATCTATGGTGTGAAGTC ATCAGGTAATCAATCAGAGCGAGCCCTGAGGGAAACCGGACGACTGTCCT CTGAAGACTACCCAGAAGTTGCTAAAATCGTCATGAAGGATATCTATGTT GACGACTGTCTATCCGGTGAGAAGTCAATGGAGCTTGCCACTCAACGTGC TGATGAACTTGAGATCGTGGTCAATCGTGGAGGTTTCTCACTCAAAGGAA TAACATTCTCCCACCAAAAACCAAAGCCAGACCTGACATCAGATGGTGAA AGCATTGGTGTCGCTGGAATGAAGTGGTATCCGGAAGAAGATGTTGTGTC ATTAGATGTCAGCGAGCTAAACTTTGCCAAGAAAGTCAGAGGCAAGAAAC CTGTCAAAATCAATGATGTACCACTTAACCTCACTCGCAGACAATGTGTC TCAAAAGTAGCTGAACTCTATGACATATCTGGGAAAATCACACCACTGAC AGCCGCAATGAAGCTTGATCTACATCACCTTGTTGATCTTGGCATTGGAT GGGACGATCGTATCCCAGACAATCTTCGACAAATATGGGACTCACATTTC AAAATGATGGAAGAAATCTCCCAAATAAAATACAGACGTGCAATCGTACC AGAGGATGCCATCAATTTAGAGATCAACTCAATCGATACAGCAGACGCTT CTAAAAACATCGCATGTGTTGCAATCTACGCACGTTTCAAGAGAAAGTGT GGGAAGTTTTCATGCCAACTTGTTTTCGCACGCTCAAGACTCATCCCAGA TGGAACTACTCAACCAAGAGGTGAACTCTTTGCAGCAACTCTCAACGCAC ACACTGGAGAAGTCGTTAGAAGAGCCTTTGGATCAAACCTCAAATCAAGC TTGAAACTGACAGACAGCCAAATTGCCTTGTTCTGGATCAATGGTGTTGA GAAGCAACTAAAGCCATGGGTCCGCAGTCGTGTTACTGAAGTCCACCGAT TCACTGAACTAGCATCATGGAAGTTTGTCTCGACCGAAAATATGATCGCA GACATTGGAACTAGGAGAGGTACAACCATTTCTGATGTATCATCAAATTC AACTTGGTTCAACGGGTTTGATTGGATGCATGATCCTGAGGATACCTTCC CCGTGAAATCTGTCGATCAAGTCAAACTCACAAATGAAGAACTCAAAGCT GCAAAGAAAGAACAGATTCTCCCAATTGTTGATCCAATCACTATACCTC

Coding sequence (CDS) from alignment at sc0000242_pilon:462402..463800-

>XLOC_018644.3 ID=XLOC_018644.3|Name=XLOC_018644.3|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1764bp|location=Sequence derived from alignment at sc0000242_pilon:462402..463800- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACCGACTAGTTGAAATTCTTATACGATGGTCGCTACATCATACAGC
CTTCCACACTGACATTAGGAAGATGTATAATTCAGTTCGTCTTCGTGAAC
ATCATTGGTGCCTACAACGATATATCTGGGAGGAACAACTTGACAAAACC
AAAATCCCAAAAGAGAAAGTCATAAAGACATTGATCTATGGTGTGAAGTC
ATCAGGTAATCAATCAGAGCGAGCCCTGAGGGAAACCGGACGACTGTCCT
CTGAAGACTACCCAGAAGTTGCTAAAATCGTCATGAAGGATATCTATGTT
GACGACTGTCTATCCGGTGAGAAGTCAATGGAGCTTGCCACTCAACGTGC
TGATGAACTTGAGATCGTGGTCAATCGTGGAGGTTTCTCACTCAAAGGAA
TAACATTCTCCCACCAAAAACCAAAGCCAGACCTGACATCAGATGGTGAA
AGCATTGGTGTCGCTGGAATGAAGTGGTATCCGGAAGAAGATGTTGTGTC
ATTAGATGTCAGCGAGCTAAACTTTGCCAAGAAAGTCAGAGGCAAGAAAC
CTGTCAAAATCAATGATGTACCACTTAACCTCACTCGCAGACAATGTGTC
TCAAAAGTAGCTGAACTCTATGACATATCTGGGAAAATCACACCACTGAC
AGCCGCAATGAAGCTTGATCTACATCACCTTGTTGATCTTGGCATTGGAT
GGGACGATCGTATCCCAGACAATCTTCGACAAATATGGGACTCACATTTC
AAAATGATGGAAGAAATCTCCCAAATAAAATACAGACGTGCAATCGTACC
AGAGATGAACCGACTAGTTGAAATTCTTATACGATGGTCGCTACATCATA
CAGCCTTCCACACTGACATTAGGAAGATGTATAATTCAGTTCGTCTTCGT
GAACATCATTGGTGCCTACAACGATATATCTGGGAGGAACAACTTGACAA
AACCAAAATCCCAAAAGAGAAAGTCATAAAGACATTGATCTATGGTGTGA
AGTCATCAGGTAATCAATCAGAGCGAGCCCTGAGGGAAACCGGACGACTG
TCCTCTGAAGACTACCCAGAAGTTGCTAAAATCGTCATGAAGGATATCTA
TGTTGACGACTGTCTATCCGGTGAGAAGTCAATGGAGCTTGCCACTCAAC
GTGCTGATGAACTTGAGATCGTGGTCAATCGTGGAGGTTTCTCACTCAAA
GGAATAACATTCTCCCACCAAAAACCAAAGCCAGACCTGACATCAGATGG
TGAAAGCATTGGTGTCGCTGGAATGAAGTGGTATCCGGAAGAAGATGTTG
TGTCATTAGATGTCAGCGAGCTAAACTTTGCCAAGAAAGTCAGAGGCAAG
AAACCTGTCAAAATCAATGATGTACCACTTAACCTCACTCGCAGACAATG
TGTCTCAAAAGTAGCTGAACTCTATGACATATCTGGGAAAATCACACCAC
TGACAGCCGCAATGAAGCTTGATCTACATCACCTTGTTGATCTTGGCATT
GGATGGGACGATCGTATCCCAGACAATCTTCGACAAATATGGGACTCACA
TTTCAAAATGATGGAAGAAATCTCCCAAATAAAATACAGACGTGCAATCG
TACCAGAGTCAAACTCACAAATGAAGAACTCAAAGCTGCAAAGAAAGAAC
AGATTCTCCCAATTGTTGATCCAATCACTATACCTCTCAAACTCACAAAT
GAAGAACTCAAAGCTGCAAAGAAAGAACAGATTCTCCCAATTGTTGATCC
AATCACTATACCTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018644.3XLOC_018644.3-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000242_pilongenomesc0000242_pilon:462402..463800 -
Properties
Property NameValue
Aaloc805-882:79
Aaloc1-804:1400