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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2245535..2250511- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018545 ID=XLOC_018545|Name=XLOC_018545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4977bp|location=Sequence derived from alignment at sc0000019_pilon:2245535..2250511- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTCCCAATTCACAGATTCTAAGTAATGAAGTCAATGGTATCAATTC
TACCGAACCCAAAAGCGCTGCTTTAGTGGCTACAAACCGCACAAATTGTA
ATTCGGATAGTTCGAAATTTATTTTCAAGAAGGATCATACCATTATTCAT
ATGGCATCTGGTAGATGCATTGTACCGAAAGGTTAGTACGGTTTCACAAC
GTAATTTAGAATCAAGAAATATCTGTTGAGATAAAAATTACTGAAAGGCA
ATCCAATTAAAAATAACAGTTCCGTAATTTGGTGAACTTTCTCATTATTT
GTATTCATTTTCGAAGTGTGTTTTCCAAAAGAATCAAGACTGTTAAATTC
CCAATTCAAGCCAAATCATTTTCGTTCTCTTGGTCTTCTTAACCCTGTAG
GAATCGGATTGTGCTTCATGGCCAAGCGAATTATCTGAGAAAGAAAATTT
TCCCTTGAGACTGAAAGAAAGACAAGGGCTGCCAAAACTAGCGAAACTGC
TAAAGGGCTACTTAGACTACACAATATATTAACGAACAATATTCGACAAT
ATGGTTTGCGGACCATAATGTACGAAGTAAACAACAGGTACTCTATTATA
AAAAGGAATTTTCTTTCTGTAAACAATCCCCCTTTATTGTTGGAATATTG
CAAATCGAGCTGACAATATATTGCGGACACCTTTTCAATATATTGCCGAC
ATTCAGCAATATATCATCAATATATTGCCTGACAATATAGGGGGGGTTTT
CAGGGGTCTTAAATACCGTCATACCGACAAAAATTTGGGTCAAATACCGT
AATGCCGTCGATAAAAGAAGCCTAATTACCTAAATACCGATACCGGTAGG
AAATGAAATACCGTAATCCCGTCGTTTTTTTCTGGTAATACCGATTTACC
GGGGAAAAAAAAGGCCCAATACCGTCGTACCGTAAAAGTGAAACCCCCCC
CTAATATATTGTGTAGTGTATGTAGCCCTTAAGAAACTGTCTCAAATACC
TATTTTGGCCAAGCATTAGGGCAGGGAAAAATGAAATAACAAACCTCGTA
CAGAGTGGATCTTTTGCGTCCATTTTTTAACGTTAACACAGTCTGACGGA
GTGCCGAGGTTTATCTCATACTATTTCCTCAAATACATAGGTGACACACC
GAACCAACCTATTGTCCTTCTACCAATCAAAAGCAGAGAATGTCGTACAA
GAATATCAAAATTCAAGGCGCTACCTGACGGTAAAATTAGACACAAACAT
ACAGGAAAATGTCTACATTTCAATTTATGTGGGAAGAAATCGAATGAAGG
GTTTTTCGATTTGGTTGATTGTACAAATGGAACATCTCTTCATTATTATG
CAGGAGAGAAATTGTTCAAAAGTAAGCAAAAATTATTTTGCCTACCTGAA
AGCTAAACCATATCATAATACCCCCTTCTCAAGGACCTGGTAAGGTTTTT
AAAGCCAGTGGAGGTAAAATAACAGACTGGAAGTCAATAGGGATCGATAT
TTTAATATTTTTTATGTTTTTTAATGGTATGCTGGGGATCTGAATTCCGT
TGTTTTCAAGTCAGAGAATTCAGTAGGGGTGGGAAAATAGCGGGGAATAG
TGGGGAAAATATCATGTCCTTACTTTCAGATTAAATACTACTAGTACAGA
CTTAAAGTCTATCACTTTTCTGATCAAAAATTTAAAGCATAGATGAAAAT
GAAAGTTGTGAGTGTAATTCTATCGGGGAAAAAGGTGTATCTTCAGCAGA
ATTGGTCCAACTTTAATAGTGGGAAATATTAAAAATGATGGGCGAAATGG
CTGAATTGTATATCCTAATTGTGTTCCGGGGGGGGGGGCAGTCAAGCAAA
TTGACCGACGGGTATGTGCAGCGGTTAAGGGTATGGTTTTCGAAATATCA
GAAATGCACTGTAAGTGTGGACTTTTGATATATGCACTGTAAGGGTGGAA
ATTTCAGCAAATCTGGGAAAAATTGCAAATTTTTGCTCGAAAATGTAGAT
TTTTTTTGCTCTAAAAGAGTTTAAAATTTGAAAAAATGCACTGTAAGGGT
ATTAAGGGTTTGTGTTGAATTTGAAGTTACTTTTCATCTCAATAGAACTG
GAGATGGAAGTAGCAATCACGGAAGATATCATCAAATTCCAATACATTCA
AAGCAATCTCTTATACACCGAATACTTCATATATCCAGTACACAGGCTAA
CCAAAAATAAACACCTGTTAGAAAAACAAACAGCGGCTAGTCAAGATGAT
AACAAACTTAATGTGATGTATTTGATGATTGATTCGATTTCACGGGCTAG
TGGGCAACGTTATTTGAATGAGACTTATAAGATGTTAGAAGAAGACCCGA
ACAGTGTCATCATGAAGGTTTGTACCCAGATGAGATGGAACTTTTATAAG
ATACTTTAATAATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCG
ATGAATTGTGGGATTGTTTCGAGTGTATTACAATAGAAATCTCTTAGGAA
TTCCTCGAGAGAATTCTATTGTTATACACTCGAAACAATCCAACAATGCG
TCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTGGTCATTTT
AAGTTATAAAAATGACGTGTTCTTTAGAAAAAGTAACAAGAATTGTTTTG
TTACTGGTTAATAACGAGCAACCAAATCAAAAAGAGCTTGTAAAAACTCC
ATCTAGTCCCTTTGTACTGGGTGTCCCAGAAAACGTGCCCCTCTTTGAAA
TGAATCTCGTCAAGTTCTATGATCTGTTGAAAAATCAATCCTTTCGCATT
CGAAAGAAGAAGATAACACCTTAAATTTTGAGGGGTCATTATCAAATTTG
GTAAACTAGATCAAAAATTATAATCTAAATGCTAAATCATTAAAAAAATT
AGGTTTAAAAGATGTAGAAATCCTATGAAATAGGCTCTTCATGATGAAAG
GTACCATATCATAATGTAAATATATTTCCAAACCATTTACTACTTTCAAT
ATGTTTTAGGGACACACTATAGTCGGTGACGGGACTACAGCACAAGTGTT
GGCCATATTAGTTGGTGAACAAGAACGACATCTACCTGAAGCACGTCGAG
GTCATAATTTCAGTAAACCTGTTGATAATTGGCCTTGGATTTGGAAAGAG
TATCACCAAAAAGGATATGTATCAGTTTTCGGTGAAGACGATGCTGGGAT
TGGAACTTTTAATTACAGGTGAGTTGGCTGGCTGTCACATGACCAGTAGA
TGATATAAAAGTCACGAGTTCGAATCTCACCTCTAGACTAACCGGTCTTC
TCTCTACCCTCCAGTTCACACAATTTGACAAAAGGCAATATCAAAATGTA
ATATTTGGCGTGCCGGGACTGCCTCTGTGTTTAAAAATAATTTGCTGTGG
ACATAACAACACCGAACCTCGTTCTTTGCGTATTATCAGCTTTTTGATGC
TCACCGATGGCGCCAGGTAATACACTGGTATTGCCTGATTTTTTATTGTG
TCAGATTTTATTTGTTCTTCTATTTTGAAGCATTTGCACTATAGTGTAAC
TTTTTGTAACGTCAGATTTCTTATGACGTTTTGTTTTGAGAAGTTCCACC
CTCTAATTATACAATTATACTTGCTTTTATAGGCTAAATGGCTTCAATAA
CACCCCATCCAATAAATACCTTCGTCCTTGGTACATTGAAATTGATACAC
AAATTCGTTGGTCAAAAAAGTTCTCCACAGACTGCTCACATAAGTTAGCT
TTCCAATACTTAAAGGATCTCTATTACGAATATCAGCAAGAGAAGAAATT
CATTTTTCATGCATCAAACCTTGGGCATAATGAGCCAGCACTGGCAACTT
CAATGGATAATGATTTGAAACAATTATTGAAATATATGAATAAAACAGGT
ACATTTGGGTTGGGTTGGGCTTTAAATTGATTTTTTGGATTCTTCTCCTC
AAATTTGAGTTGAGTTTTAATTGATTTTTAGTTAGTTCTTCTTAATTCCT
ATATTTCAGTCAATTCGTTAATGCTAAGGTATCTCCACTGACTTTTAAAA
ACCCTGACCCCATTTCGGTATAAAAATGTATTGGTATGAATGAAAGACCA
TTCCTTTTTTGAGACCTCGATCCAGCAGTTACCGTTTTTGTATAAGGCCG
TTTTCCTTTTGTTTGTAGGTGCACTTGACAACACGGTGCTTGTGATTTTC
GGTGATCACGGTGACCGAACAGCTGCATTCCGAAAAACCATGCAAGGGAA
GCTAGAAGAAAGACTACCTTTCGTGTCAATCACCGTTCCCTCTAGAATGC
GTAACAAATTCCCTATGGAATTCAAAAACTTGGTAAAAAATTCGGAAATC
TTGACTTCGCATTACGATTTGTATGCTACTAACTTACACTTAGCCAATTT
CCCTGAACTTCCATTAAAACAACATAGATACGGGAAAAGTTTGTTTACCG
ATATTACAGCGCTACAACGGGAATGCGCAGATGCGGGAGTCGAAGAGACG
TGGTGCCCGTGTGTTAGTTATGAAATGGTTGACAAAAATAATGACATTGT
TTTACAAATGGCTTATCAAGTTGTTGAAAAGTTCAATCAATATTTACGTG
AAAATCCAACAGTATCTCAAAAATGTGAGCAGCTTGTGTTAGATGAAGTA
CTGCGCGTGCGTAAAGTCACCACAAGTAAACAAGTAGAATATTTCGTTAC
AACAGAGAATTCAGAATGCGACGGTTGTGGGATACAGTTAAATCAAACGG
CAAGTTTTGTCAATCAGAAATTCGAATTATTAATACAAGTTAAACCATCT
GATGGACAATTTGAAATGTTGGTGGATTATAATTCTATGACGAATCGGAT
TGAGGTCGGGGAAGACTTTGTACAGAGAGTGAGCAGGATAAACCGTTATG
GAGATCAACCGAAATGTGTACAACGACAGTATCCTTATCATAGAGCATTC
TGTTTTTGTAAGGACAACCAGAAATGA Coding sequence (CDS) from alignment at sc0000019_pilon:2245535..2250511- >XLOC_018545 ID=XLOC_018545|Name=XLOC_018545|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3936bp|location=Sequence derived from alignment at sc0000019_pilon:2245535..2250511- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTCCCAATTCACAGATTCTAAGTAATGAAGTCAATGGTATCAATTC
TACCGAACCCAAAAGCGCTGCTTTAGTGGCTACAAACCGCACAAATTGTA
ATTCGGATAGTTCGAAATTTATTTTCAAGAAGGATCATACCATTATTCAT
ATGGCATCTGGTAGATGCATTGTACCGAAAGATGACTCCCAATTCACAGA
TTCTAAGTAATGAAGTCAATGGTATCAATTCTACCGAACCCAAAAGCGCT
GCTTTAGTGGCTACAAACCGCACAAATTGTAATTCGGATAGTTCGAAATT
TATTTTCAAGAAGGATCATACCATTATTCATATGGCATCTGGTAGATGCA
TTGTACCGAAAGGTGACACACCGAACCAACCTATTGTCCTTCTACCAATC
AAAAGCAGAGAATGTCGTACAAGAATATCAAAATTCAAGGCGCTACCTGA
CGGTAAAATTAGACACAAACATACAGGAAAATGTCTACATTTCAATTTAT
GTGGGAAGAAATCGAATGAAGGGTTTTTCGATTTGGTTGATTGTACAAAT
GGAACATCTCTTCATTATTATGCAGGAGAGAAATTGTTCAAAAGTGACAC
ACCGAACCAACCTATTGTCCTTCTACCAATCAAAAGCAGAGAATGTCGTA
CAAGAATATCAAAATTCAAGGCGCTACCTGACGGTAAAATTAGACACAAA
CATACAGGAAAATGTCTACATTTCAATTTATGTGGGAAGAAATCGAATGA
AGGGTTTTTCGATTTGGTTGATTGTACAAATGGAACATCTCTTCATTATT
ATGCAGGAGAGAAATTGTTCAAAAAACTGGAGATGGAAGTAGCAATCACG
GAAGATATCATCAAATTCCAATACATTCAAAGCAATCTCTTATACACCGA
ATACTTCATATATCCAGTACACAGGCTAACCAAAAATAAACACCTGTTAG
AAAAACAAACAGCGGCTAGTCAAGATGATAACAAACTTAATGTGATGTAT
TTGATGATTGATTCGATTTCACGGGCTAGTGGGCAACGTTATTTGAATGA
GACTTATAAGATGTTAGAAGAAGACCCGAACAGTGTCATCATGAAGAACT
GGAGATGGAAGTAGCAATCACGGAAGATATCATCAAATTCCAATACATTC
AAAGCAATCTCTTATACACCGAATACTTCATATATCCAGTACACAGGCTA
ACCAAAAATAAACACCTGTTAGAAAAACAAACAGCGGCTAGTCAAGATGA
TAACAAACTTAATGTGATGTATTTGATGATTGATTCGATTTCACGGGCTA
GTGGGCAACGTTATTTGAATGAGACTTATAAGATGTTAGAAGAAGACCCG
AACAGTGTCATCATGAAGGGACACACTATAGTCGGTGACGGGACTACAGC
ACAAGTGTTGGCCATATTAGTTGGTGAACAAGAACGACATCTACCTGAAG
CACGTCGAGGTCATAATTTCAGTAAACCTGTTGATAATTGGCCTTGGATT
TGGAAAGAGTATCACCAAAAAGGATATGTATCAGTTTTCGGTGAAGACGA
TGCTGGGATTGGAACTTTTAATTACAGGGACACACTATAGTCGGTGACGG
GACTACAGCACAAGTGTTGGCCATATTAGTTGGTGAACAAGAACGACATC
TACCTGAAGCACGTCGAGGTCATAATTTCAGTAAACCTGTTGATAATTGG
CCTTGGATTTGGAAAGAGTATCACCAAAAAGGATATGTATCAGTTTTCGG
TGAAGACGATGCTGGGATTGGAACTTTTAATTACAGGCTAAATGGCTTCA
ATAACACCCCATCCAATAAATACCTTCGTCCTTGGTACATTGAAATTGAT
ACACAAATTCGTTGGTCAAAAAAGTTCTCCACAGACTGCTCACATAAGTT
AGCTTTCCAATACTTAAAGGATCTCTATTACGAATATCAGCAAGAGAAGA
AATTCATTTTTCATGCATCAAACCTTGGGCATAATGAGCCAGCACTGGCA
ACTTCAATGGATAATGATTTGAAACAATTATTGAAATATATGAATAAAAC
AGGCTAAATGGCTTCAATAACACCCCATCCAATAAATACCTTCGTCCTTG
GTACATTGAAATTGATACACAAATTCGTTGGTCAAAAAAGTTCTCCACAG
ACTGCTCACATAAGTTAGCTTTCCAATACTTAAAGGATCTCTATTACGAA
TATCAGCAAGAGAAGAAATTCATTTTTCATGCATCAAACCTTGGGCATAA
TGAGCCAGCACTGGCAACTTCAATGGATAATGATTTGAAACAATTATTGA
AATATATGAATAAAACAGGTGCACTTGACAACACGGTGCTTGTGATTTTC
GGTGATCACGGTGACCGAACAGCTGCATTCCGAAAAACCATGCAAGGGAA
GCTAGAAGAAAGACTACCTTTCGTGTCAATCACCGTTCCCTCTAGAATGC
GTAACAAATTCCCTATGGAATTCAAAAACTTGGTAAAAAATTCGGAAATC
TTGACTTCGCATTACGATTTGTATGCTACTAACTTACACTTAGCCAATTT
CCCTGAACTTCCATTAAAACAACATAGATACGGGAAAAGTTTGTTTACCG
ATATTACAGCGCTACAACGGGAATGCGCAGATGCGGGAGTCGAAGAGACG
TGGTGCCCGTGTGTTAGTTATGAAATGGTTGACAAAAATAATGACATTGT
TTTACAAATGGCTTATCAAGTTGTTGAAAAGTTCAATCAATATTTACGTG
AAAATCCAACAGTATCTCAAAAATGTGAGCAGCTTGTGTTAGATGAAGTA
CTGCGCGTGCGTAAAGTCACCACAAGTAAACAAGTAGAATATTTCGTTAC
AACAGAGAATTCAGAATGCGACGGTTGTGGGATACAGTTAAATCAAACGG
CAAGTTTTGTCAATCAGAAATTCGAATTATTAATACAAGTTAAACCATCT
GATGGACAATTTGAAATGTTGGTGGATTATAATTCTATGACGAATCGGAT
TGAGGTCGGGGAAGACTTTGTACAGAGAGTGAGCAGGATAAACCGTTATG
GAGATCAACCGAAATGTGTACAACGACAGTATCCTTATCATAGAGCATTC
TGTTTTTGTAAGGACAACCAGAAATGAGTGCACTTGACAACACGGTGCTT
GTGATTTTCGGTGATCACGGTGACCGAACAGCTGCATTCCGAAAAACCAT
GCAAGGGAAGCTAGAAGAAAGACTACCTTTCGTGTCAATCACCGTTCCCT
CTAGAATGCGTAACAAATTCCCTATGGAATTCAAAAACTTGGTAAAAAAT
TCGGAAATCTTGACTTCGCATTACGATTTGTATGCTACTAACTTACACTT
AGCCAATTTCCCTGAACTTCCATTAAAACAACATAGATACGGGAAAAGTT
TGTTTACCGATATTACAGCGCTACAACGGGAATGCGCAGATGCGGGAGTC
GAAGAGACGTGGTGCCCGTGTGTTAGTTATGAAATGGTTGACAAAAATAA
TGACATTGTTTTACAAATGGCTTATCAAGTTGTTGAAAAGTTCAATCAAT
ATTTACGTGAAAATCCAACAGTATCTCAAAAATGTGAGCAGCTTGTGTTA
GATGAAGTACTGCGCGTGCGTAAAGTCACCACAAGTAAACAAGTAGAATA
TTTCGTTACAACAGAGAATTCAGAATGCGACGGTTGTGGGATACAGTTAA
ATCAAACGGCAAGTTTTGTCAATCAGAAATTCGAATTATTAATACAAGTT
AAACCATCTGATGGACAATTTGAAATGTTGGTGGATTATAATTCTATGAC
GAATCGGATTGAGGTCGGGGAAGACTTTGTACAGAGAGTGAGCAGGATAA
ACCGTTATGGAGATCAACCGAAATGTGTACAACGACAGTATCCTTATCAT
AGAGCATTCTGTTTTTGTAAGGACAACCAGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2245535..2250511 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1162-1968:808 |
| Aaloc | 895-1158:1345 |
| Aaloc | 685-891:1969 |
| Aaloc | 415-684:2881 |
| Aaloc | 184-411:3836 |
| Aaloc | 1-180:4978 |
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