XLOC_018541 (mRNA) -

Overview
NameXLOC_018541
Unique NameXLOC_018541
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:2284151..2285299+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018541 ID=XLOC_018541|Name=XLOC_018541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1149bp|location=Sequence derived from alignment at sc0000019_pilon:2284151..2285299+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCCAAAGAGGGCGTTTGGCATCACAACAGGCCGGTATGGCGTCTATGAT GAGCAATGGAATGATGAATGGTCATTCCTTCCTGTCGGGTTTCATCTCCC TTCTACTACGCGCCGAACCATATCCCGTCATCCGATACCCGAACGCCATG GGTAACGGTATGTACGGTGGAGCCGCATCCCCTGGTGGTGGATTTGATAA TTGTGAGTTGGCAGCTAGGCTACTTTTCAGTGCAGTTGAATGGGCCAGAA ATATCCCGTTTTTCCCCGATCTAGCAATTACCGATCAAGTAGCTTTACTG AGGCTAGGTTGGAAGGAATTGTTCATTTTGAATGCCGCCCAATGTCCGAT GCCCATCCAAGTCGCCCATCTATTGACTAATCAGACCAATCACAACGCTT TGAATGACCGCGTGGTTTCCTTTCTCGATCACGTGAGAATTTTACAAGAC CAATTGGATAAACTGAAAGCACTACATGTTGATCCAGCTGAATATGCATG CTTAAAAGCCATCGCTATTTTTACAccaggtaatttttcttcttcttgat cTTGAAAATGTCACACAGGAGAGCATCGTATCAGCTGCGGTCAACCAATA ATTTTCGATTTCTGCTTCTTCTAATGTTCAATCTTCTTAGTCTGATTCAA TTGATGTTTTATATCAGAAGCGTTCTTGTTAGAAGGTCAgctaaatcttt ttctttttcgtttttcaaagGAACTATTATAGTTAGAGATACATGCAATG tttgtttgaatattttgaaaaatttgacagtTCCTTGCATTTATGAGACT GCAAACCAATCCCAGCCCTAAAACCTGTCATTGTTTTTTGTCTATAGATG CACCAGGGCTAAGTGATCCACAATATATCGAAAACTTACAAGAAAAAACA CAATGTGCTTTAGAAGATTACACCAGAACACAATACCCAAACCAACCTAT TCGCTTCGGAAAACTCTTACTTCGGTTACCGTCAATTCGGACCATTAGTC CGACCGTTATTGAACAATTATTCTTTGTCCGTTTGGTCGGAAAAACACCG ATTGAAACTTTGATAAGAGATATGTTATTATCAGGAAACTCATACAATTT ACCTACGTTGAATAATTTTGCTGTTGGTGGTGGTGCAAGCCGTACGTGA

Coding sequence (CDS) from alignment at sc0000019_pilon:2284151..2285299+

>XLOC_018541 ID=XLOC_018541|Name=XLOC_018541|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1662bp|location=Sequence derived from alignment at sc0000019_pilon:2284151..2285299+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCCAAAGAGGGCGTTTGGCATCACAACAGGCCGGTATGGCGTCTATGAT
GAGCAATGGAATGATGAATGGTCATTCCTTCCTGTCGGGTTTCATCTCCC
TTCTACTACGCGCCGAACCATATCCCGTCATCCGATACCCGAACGCCATG
GGTAACGGTATGTACGGTGGAGCCGCATCCCCTGGTGGTGGATTTGATAA
TTGTGAGTTGGCAGCTAGGCTACTTTTCAGTGCAGTTGAATGGGCCAGAA
ATATCCCGTTTTTCCCCGATCTAGCAATTACCGATCAAGTAGCTTTACTG
AGGCTAGGTTGGAAGGAATTGTTCATTTTGAATGCCGCCCAATGTCCGAT
GCCCATCCAAGTCGCCCATCTATTGACTAATCAGACCAATCACAACGCTT
TGAATGACCGCGTGGTTTCCTTTCTCGATCACGTGAGAATTTTACAAGAC
CAATTGGATAAACTGAAAGCACTACATGTTGATCCAGCTGAATATGCATG
CTTAAAAGCCATCGCTATTTTTACAccagGTCCAAAGAGGGCGTTTGGCA
TCACAACAGGCCGGTATGGCGTCTATGATGAGCAATGGAATGATGAATGG
TCATTCCTTCCTGTCGGGTTTCATCTCCCTTCTACTACGCGCCGAACCAT
ATCCCGTCATCCGATACCCGAACGCCATGGGTAACGGTATGTACGGTGGA
GCCGCATCCCCTGGTGGTGGATTTGATAATTGTGAGTTGGCAGCTAGGCT
ACTTTTCAGTGCAGTTGAATGGGCCAGAAATATCCCGTTTTTCCCCGATC
TAGCAATTACCGATCAAGTAGCTTTACTGAGGCTAGGTTGGAAGGAATTG
TTCATTTTGAATGCCGCCCAATGTCCGATGCCCATCCAAGTCGCCCATCT
ATTGACTAATCAGACCAATCACAACGCTTTGAATGACCGCGTGGTTTCCT
TTCTCGATCACGTGAGAATTTTACAAGACCAATTGGATAAACTGAAAGCA
CTACATGTTGATCCAGCTGAATATGCATGCTTAAAAGCCATCGCTATTTT
TACAccagATGCACCAGGGCTAAGTGATCCACAATATATCGAAAACTTAC
AAGAAAAAACACAATGTGCTTTAGAAGATTACACCAGAACACAATACCCA
AACCAACCTATTCGCTTCGGAAAACTCTTACTTCGGTTACCGTCAATTCG
GACCATTAGTCCGACCGTTATTGAACAATTATTCTTTGTCCGTTTGGTCG
GAAAAACACCGATTGAAACTTTGATAAGAGATATGTTATTATCAGGAAAC
TCATACAATTTACCTACGTTGAATAATTTTGCTGTTGGTGGTGGTGCAAG
CCGTACGTGAATGCACCAGGGCTAAGTGATCCACAATATATCGAAAACTT
ACAAGAAAAAACACAATGTGCTTTAGAAGATTACACCAGAACACAATACC
CAAACCAACCTATTCGCTTCGGAAAACTCTTACTTCGGTTACCGTCAATT
CGGACCATTAGTCCGACCGTTATTGAACAATTATTCTTTGTCCGTTTGGT
CGGAAAAACACCGATTGAAACTTTGATAAGAGATATGTTATTATCAGGAA
ACTCATACAATTTACCTACGTTGAATAATTTTGCTGTTGGTGGTGGTGCA
AGCCGTACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018541XLOC_018541-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:2284151..2285299 +
Properties
Property NameValue
Aaloc532-831:850
Aaloc1-528:1