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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000019_pilon:2259199..2263457+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018539 ID=XLOC_018539|Name=XLOC_018539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4259bp|location=Sequence derived from alignment at sc0000019_pilon:2259199..2263457+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATGAAACTTTTAGCTCTCCTTTGCCTTATTGGCGTTTGCGTTGGTTA
CACCATCGAGAAAAACCCTCAAGTGGAAGATAATGAATGGCTTGTGTGGA
GATTAACTCATAAGAAAGCTTACAAAGATTTGGACGAAGAAAGAGTTCGA
TATGCTATTTGGAAAGATAATGCTCAATACATCACTGAATTCAATGCTCA
AAACAAAcacatgaaattgaaaatcaacCATTTCGGAGATTACACCAACC
TTGAGTTCAGGTAAtttacatccctgtttcacATGATTTGATGACCTTAA
CGTATTCTGATCTCCCCAGATGTCTGGAGAGCTTCTAAACTGTTCTAAAT
TCAGAGGAGGTACCAAGGAAATACAATTTCGTACTTAAACATCCCTGTTT
CATCTGAACTTTTAAGCCAATAAATGCATTTGGGGATGAAAATTACTATT
CGTAGGGATTTTAGATTCGATGGTTAATAGCTCAGGAAATGAAAAAGAGA
TTCTAAAGATTCCTTGCACTTCCACACACAATCCCATTGAGGAATCGAAA
GCTAAAAATCGAAAATCCAACCGTTATGACTGCTTGCTCTTATATGGATT
AGCCTGACAcaaaacgccaattttttttatttcaacattAATTGGCTAAA
ATcatcaataaaatgaaaaaaaattaatcaacttGGGTTTCAAGAATACA
TCACCTTTCTAGTTTGAAAGATCATCCGAccaatataatttgtttttcct
tcaGAGCACAAATGAACGGATACCGAACAATGAACAGTACAGGAGCTTCC
ACCTTCATGAGACCAGCTCATTTGCAAGCACCTCAAGAAGTTGACTGGAG
ACAGCAAGGTTACGTAACACCTGTCAAGAATCAAGGACAATGTGGTTCAT
GTTGGGCTTTCTCCACTGTAAGTGGAAAATGTCTTGACAAAAATCAAGCT
CCCCCTTGGATTGTCatcaagcccccccccctgtcaTCTAAATTTCAGAG
ACGAGTTCTAACGTTTACCTATTTTGAAAAGCCCCCTGGATTTCCCAAGt
ttttttGAGATCACCACATATGGATGGAAAATATGACCTCCTCAACATTG
AGGAGTAAAATCTTTTGTCTGGAAAGCCCAATCTTGGACTAATTTGGTAA
AAACACAACAAGATCCTTTTAAAGTAGGCCCGGAGGAAGCAGAGAGACTA
GGGGGACTTCAGCCTCCCCTTTTTTGAGCAAATgcgatttttttctcaaa
ttcctagcaaattttgtctcattttgaGCGTGTCTGATTTTCAGCCGCCC
CACTTTAATGGTTGTTCTGCCGGGCCTACAAAAGGTTCCCACTTTCCCAC
TTTCCCCATCGATGATGTCAGCGAGGAAAGATTTCCTTAATctagtcccg
ggggggggggggcagctgggcaaaaggaccgacgggtatgtgcgggtcct
aagggtaccttttccaatatgtttaaaatgcactgtaagggtcggaaaaa
ctagagatgcactgtaagggtagaaatttcagaaaattcttgaaaattct
agatattttgaccaaaaatactagaattttgaccattttttgcacgaaag
ggatcgaaaatttggagggaaatgcactctaagggtatgattttcactga
tttttgctgcactgtaagggtgcaattttaaaagccaatttttggcccgc
acataccgtcagttcgCAAACCCAGTcccccccGGGAATCTAGTAATTGA
TAAATACAGAAATTTTTGGGAATGATGATTTCTATTTCTACATTTAATTT
TACAGACCGGTTCATTGGAAGGACAACATTTCAAGAAAACTGGACAATTG
GTCAGCTTGAGCGAACAAAATTTAGTTGATTGCTCTGGGGAAGAAGGAAA
CAACGGTTGCAATGGAGGTTTGATGGATTATGCTTTCCGATACATCCAAA
AAGATGGAATCGATACAGAAGAAAGCTACCCATACACTGCACAGGTTTGT
AATTGATTTTTGTCTACATCATTTTCAGACTTTTGTCTATATTTATTTAT
ACTGTTCATTTTATTCGCTTTTTTCTTGGTCTTCAATGACAAAACTTCCC
TGGGAAATCAATACTTAGAATATGGTTTGGGGACTGCTAAGGTGTTTTAG
AGAGGAAGGCATGTATGTTTATTTCTTATTGGACCTACGGACGGCAAGGT
CACTTTACTTCGGGAAAATATGCGAAGTTTATTGAGTACTGGAGGCTATA
AATGTCAGCCTGTATGTAAAAAAGCTATAATCAGTGGTGAACTCGACAAT
TAAGGTACCATCACGGATATTTtgatagcgagtttatgtatttgcacttt
tgaggacggtaaagtgactgaagcgatttgaaatAACCCACAGTTTTGAC
CCACAAAATCGAGCACGGTAAAAGTGTTGATTTATCGTTGTCCTCAGTCA
GTACGTAAACTTATCGGTTCagggtcggttcagggttatggaatctgggg
gaggctgagtgttggacgtccataaaacatgtttaaagccgctgcgcctg
tcgcaagtcagggactccagattgcattggttgggtttttgagtggtttt
tggtgtttgtgtttttctgcttggctttttaaaactttatgtctattggt
ttattggttctttttcgcataaaattctcatttcttgacaggatgtttga
ttggtttgatttatatatttacaaaaattcaaaaaaatggaaaaaaacat
ataattataaaaatattagtgcctttttatgtttcatctttattttattt
agtattttcaacactttctctccttgaggtcagatctctgatcttcacca
tatatattttcttttcttgttaCCAGGACGGTACTTGTAAATTCAGCAAA
TCCAACGTTGGAGCTACAGTCTCTGGCTACACCGACGTTTCTCGTGGTGA
TGAAAATGCTCTCAGAGACGCCATCGCATCAGTTGGACCAATCTCCGTCG
CTATTGATGCCAGTCACAGGTAATTTCAAATCAACACAACCTTTAGTAGT
TTAATCTTAAATATTCATGCTACTGTAATcattgcaatgacttcacgaaa
ttagtTTACCTGCTTTTCTATTCAATACATAACTCGAATCTAGCCTAGTT
ATCTACTTAAGCCCCCATTCACAAGGCTAAGGCATACGAATTAggtgctt
taaagatttttttatttttatggatgttaagtttgccttggagtGTAGTC
ACAACATTCAGATTCATCCTGCTAAccgaatcaaactagcttagatttct
agtcTAATTTGAAACCAATCAAGTACAATCAGCTCATGTAAGaagtgacg
taatgtcagaagcaACCGTAGGGACCCTGAGTATGGTTGAAACTACTAAT
ATTGTCCAGTTTTCTTTAAACCCAAAATGTTATTATCCATCAAGCCCTCA
ATTGTTCATTAGAGATTCAACTGATTATCAATCAAACGAGATCactatta
cacccctgtctcacagccccggtggaacttttttcctcagtggggataaa
aattcaaattgggatatataaattctattgttctaaaatccagtggagat
ggttttggagtgcaaattttaaaacattgattttcgaatgggggtgaaat
caaagtcaatttacaAGTGGGACTTTTCCGGGTACTATTTCTTGCCTGTT
TTAACTAATTCCTTCTTCAAATCTCTTTACAGATCCTTCCAATTCTACTC
AACTGGTGTTTACTACGAACCACAGTGCTCTTCCACTAGACTGGATCACG
GTGTATTAGCTGTTGGATATGGGTCAGACAACGGACAAGATTATTGGTTG
GttaaaaacaggtaaaaatGAAACTTACAAACCGAAAATGAAGATTAGGG
AAAGTTTTCAATTCATCATTGTTTCAACTGAACGATATGCTAGTCTGGAG
ACATATGACAAAAACATTTCCAAGAAAAAGCCCTAATACTAACAAAAAGT
TGTCGCGTATAGTGTAGAAATCACTataacattttctgaaaattttgaat
cacaATATACCTTTAGAtgatgataaaaatttcaaaattatcaattgGCT
ATCAATTGACCgtaattttttggtcaattcatttatctatatcttttttt
tcctttcagcTGGGGAATGTCATGGGGCAGCGAAGGTTACATCAAAATGA
GACGAAACTATTACAACAACTGCGGTGTCGCTTCTCAAGCCAGCTATCCA
TTGGTCTAA Coding sequence (CDS) from alignment at sc0000019_pilon:2259199..2263457+ >XLOC_018539 ID=XLOC_018539|Name=XLOC_018539|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000019_pilon:2259199..2263457+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGATGAAACTTTTAGCTCTCCTTTGCCTTATTGGCGTTTGCGTTGGTTA
CACCATCGAGAAAAACCCTCAAGTGGAAGATAATGAATGGCTTGTGTGGA
GATTAACTCATAAGAAAGCTTACAAAGATTTGGACGAAGAAAGAGTTCGA
TATGCTATTTGGAAAGATAATGCTCAATACATCACTGAATTCAATGCTCA
AAACAAAcacatgaaattgaaaatcaacCATTTCGGAGATTACACCAACC
TTGAGTTCAGCAGATGAAACTTTTAGCTCTCCTTTGCCTTATTGGCGTTT
GCGTTGGTTACACCATCGAGAAAAACCCTCAAGTGGAAGATAATGAATGG
CTTGTGTGGAGATTAACTCATAAGAAAGCTTACAAAGATTTGGACGAAGA
AAGAGTTCGATATGCTATTTGGAAAGATAATGCTCAATACATCACTGAAT
TCAATGCTCAAAACAAAcacatgaaattgaaaatcaacCATTTCGGAGAT
TACACCAACCTTGAGTTCAGAGCACAAATGAACGGATACCGAACAATGAA
CAGTACAGGAGCTTCCACCTTCATGAGACCAGCTCATTTGCAAGCACCTC
AAGAAGTTGACTGGAGACAGCAAGGTTACGTAACACCTGTCAAGAATCAA
GGACAATGTGGTTCATGTTGGGCTTTCTCCACTAGCACAAATGAACGGAT
ACCGAACAATGAACAGTACAGGAGCTTCCACCTTCATGAGACCAGCTCAT
TTGCAAGCACCTCAAGAAGTTGACTGGAGACAGCAAGGTTACGTAACACC
TGTCAAGAATCAAGGACAATGTGGTTCATGTTGGGCTTTCTCCACTACCG
GTTCATTGGAAGGACAACATTTCAAGAAAACTGGACAATTGGTCAGCTTG
AGCGAACAAAATTTAGTTGATTGCTCTGGGGAAGAAGGAAACAACGGTTG
CAATGGAGGTTTGATGGATTATGCTTTCCGATACATCCAAAAAGATGGAA
TCGATACAGAAGAAAGCTACCCATACACTGCACAGACCGGTTCATTGGAA
GGACAACATTTCAAGAAAACTGGACAATTGGTCAGCTTGAGCGAACAAAA
TTTAGTTGATTGCTCTGGGGAAGAAGGAAACAACGGTTGCAATGGAGGTT
TGATGGATTATGCTTTCCGATACATCCAAAAAGATGGAATCGATACAGAA
GAAAGCTACCCATACACTGCACAGGACGGTACTTGTAAATTCAGCAAATC
CAACGTTGGAGCTACAGTCTCTGGCTACACCGACGTTTCTCGTGGTGATG
AAAATGCTCTCAGAGACGCCATCGCATCAGTTGGACCAATCTCCGTCGCT
ATTGATGCCAGTCACAGGACGGTACTTGTAAATTCAGCAAATCCAACGTT
GGAGCTACAGTCTCTGGCTACACCGACGTTTCTCGTGGTGATGAAAATGC
TCTCAGAGACGCCATCGCATCAGTTGGACCAATCTCCGTCGCTATTGATG
CCAGTCACAGATCCTTCCAATTCTACTCAACTGGTGTTTACTACGAACCA
CAGTGCTCTTCCACTAGACTGGATCACGGTGTATTAGCTGTTGGATATGG
GTCAGACAACGGACAAGATTATTGGTTGGttaaaaacagATCCTTCCAAT
TCTACTCAACTGGTGTTTACTACGAACCACAGTGCTCTTCCACTAGACTG
GATCACGGTGTATTAGCTGTTGGATATGGGTCAGACAACGGACAAGATTA
TTGGTTGGttaaaaacagcTGGGGAATGTCATGGGGCAGCGAAGGTTACA
TCAAAATGAGACGAAACTATTACAACAACTGCGGTGTCGCTTCTCAAGCC
AGCTATCCATTGGTCTAAcTGGGGAATGTCATGGGGCAGCGAAGGTTACA
TCAAAATGAGACGAAACTATTACAACAACTGCGGTGTCGCTTCTCAAGCC
AGCTATCCATTGGTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019_pilon | genome | sc0000019_pilon:2259199..2263457 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 886-984:4161 |
| Aaloc | 757-882:3734 |
| Aaloc | 613-753:2877 |
| Aaloc | 424-612:1806 |
| Aaloc | 262-423:756 |
| Aaloc | 1-258:1 |
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