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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:119773..121809+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018486 ID=XLOC_018486|Name=XLOC_018486|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2037bp|location=Sequence derived from alignment at sc0000279_pilon:119773..121809+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTTTTAGACATCATGGTTCTTCATACAAGTACGATAGAACTCAT
ATCATCCATACATGGTCATCAGAGGCGAGCTGAACGGTGTATCGAGAAGA
AAGATTTACAGGCTGCGGTAAAATatgggaaaaaagaaatgtgtaGAAGA
TTTGACAAAGCTGGGAGACCACTCATTCGATTTAAGTACACTTTTGCTGA
TGTTGTTTATATTACAGACGAGTCAAGTACACGAGAAATAACAAGTTATG
TTTTGCCTATCCCACTAGATAAAGTTGATGTTCCATTGATTGATCAAAAT
AAATATTATGCTGCTAAACGACGTATTGAAGAAGATCCCTCAATTATCAC
GTCACACTCAGTTTTCGTTGTTGATTGTAGTGGTTCAATGAGAAATGCAG
ATGTTGTAGCCCATCGCAGTAGATTGGATTCCGTACGTTACTCCATTGCT
ACAGAGTTCATCGCAAAACGACTGGACAAACCTTCCTATGGCATCACTCC
ATTTGATGTAGTCACTTTGATTGAAATGCGAGATAATGCCACtgttattt
ttgagaaagaacCAATGAGCTGGATTCTGTACAACAAAATCGTTGATAGA
GCTAAAGAGAGCAGTCCATACTACCATGGCAATTATTTACCATCCATTGA
AAAGGCACATCAGGCCTTGAAAGATGGCGACCATGAAGATTTggcattgt
ttttgttttttcttacagaTGGTAGACCAAGTGATTGTAATGGAGACACA
AACATTCAGTCTATTCTTAACCAAATCTCTGAAATCGGTCAACAGTTCAA
GGACCGGTTGAACTTTGGGATGGTTGCTTATGGTAACCAAAATGAAAACA
TGGAAGTATTGGAAAAAATGACAGCAAGCTTGTCACTCAAAGGATGCACT
GGAAAATTTGAGCGCTCGGATCTCAAAAAACTGAATTCTCTATCAACGTC
TATTGCTGAAATGTCCAGTACATTGACAAACACCCGCACTTTACTCACTG
CTGTCAGAAGTAGCAAACGGAAAGAGAAAGATTATACTCTGACAAAGTTT
AATAGGAATGTCAAGATTCCAGGAATACACTGGCAATCGAAGAATGTATT
TAATCATAGCTTAACCCGTTATGAGTTTATCCGATCTGGGAAAGGATTCC
GCTGGGAAGAGAAACCATTGATGAACAAGTCAGCTGTTGGAATATCCTTT
AATAATCAGCCTTTTGGAGAAGGCGCTGAACGTATTGTTTATCAGCTATG
TGAAATCAACCAGTATGGTAAGAAAGTCGGTGAAAATTTAGTTGCAAAAG
ATGATAAATTTCAGGGTAGTTATGAATATCTCCAGTATCATGAATCCTTT
TGTAAAACGCAAAGGATTTCTCAAAACCTGGCAAAAAAGTTTAATGATCT
TCTAGATCGATCTCCTTATGTTGGGAAGAGTGTTCCTCGTATTACGTTTC
TCGATTGTTATGTTTACACTTTCCTTGATCCAGATGACAATATTGAGTAT
AATTATTTGGCAGAGAGAGAATTGGATAATACACGGTACATAAAGTGGAA
CAATAATGCAGGAGGCGTGCATGGAATGACAAAACAAAAGCGAGTTGTTT
CACAAATTATTgaggaggaagaagaagaagaagaagaagaggaatCAGGA
CCTGAGACGACAAAGTTTGAAGAGGTTGATTCTGCTGATGAAGAGGATCA
TTATGGTGGCctagaaaaaattgaatttctatcAAATGTTAGTGctaaaa
atgttgatattttggACGAGGAAGTACCGCAAGCTTTCACTCATTTCACT
TATATGTGGAGCAAGAGAGAGAAGATGGTGTGTGACCTCCAAGGTGTTCT
TGATCAGGCGAAACGATTGTTTGAGTTTACAGATCCTGCTATCCATTATG
CGTCCCAAAATGGAAGGCGTCATGTTTTTGGACGAACAGACAAGGGAAAA
AACGGTatgttagaattttttaaaacacaCAAATGTAACAAGTTGTGTGA
CTTACTTCGACTCTCAAGCATTAAACggcaaaattaa Coding sequence (CDS) from alignment at sc0000279_pilon:119773..121809+ >XLOC_018486 ID=XLOC_018486|Name=XLOC_018486|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4074bp|location=Sequence derived from alignment at sc0000279_pilon:119773..121809+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATTTTTAGACATCATGGTTCTTCATACAAGTACGATAGAACTCAT
ATCATCCATACATGGTCATCAGAGGCGAGCTGAACGGTGTATCGAGAAGA
AAGATTTACAGGCTGCGGTAAAATatgggaaaaaagaaatgtgtaGAAGA
TTTGACAAAGCTGGGAGACCACTCATTCGATTTAAGTACACTTTTGCTGA
TGTTGTTTATATTACAGACGAGTCAAGTACACGAGAAATAACAAGTTATG
TTTTGCCTATCCCACTAGATAAAGTTGATGTTCCATTGATTGATCAAAAT
AAATATTATGCTGCTAAACGACGTATTGAAGAAGATCCCTCAATTATCAC
GTCACACTCAGTTTTCGTTGTTGATTGTAGTGGTTCAATGAGAAATGCAG
ATGTTGTAGCCCATCGCAGTAGATTGGATTCCGTACGTTACTCCATTGCT
ACAGAGTTCATCGCAAAACGACTGGACAAACCTTCCTATGGCATCACTCC
ATTTGATGTAGTCACTTTGATTGAAATGCGAGATAATGCCACtgttattt
ttgagaaagaacCAATGAGCTGGATTCTGTACAACAAAATCGTTGATAGA
GCTAAAGAGAGCAGTCCATACTACCATGGCAATTATTTACCATCCATTGA
AAAGGCACATCAGGCCTTGAAAGATGGCGACCATGAAGATTTggcattgt
ttttgttttttcttacagaTGGTAGACCAAGTGATTGTAATGGAGACACA
AACATTCAGTCTATTCTTAACCAAATCTCTGAAATCGGTCAACAGTTCAA
GGACCGGTTGAACTTTGGGATGGTTGCTTATGGTAACCAAAATGAAAACA
TGGAAGTATTGGAAAAAATGACAGCAAGCTTGTCACTCAAAGGATGCACT
GGAAAATTTGAGCGCTCGGATCTCAAAAAACTGAATTCTCTATCAACGTC
TATTGCTGAAATGTCCAGTACATTGACAAACACCCGCACTTTACTCACTG
CTGTCAGAAGTAGCAAACGGAAAGAGAAAGATTATACTCTGACAAAGTTT
AATAGGAATGTCAAGATTCCAGGAATACACTGGCAATCGAAGAATGTATT
TAATCATAGCTTAACCCGTTATGAGTTTATCCGATCTGGGAAAGGATTCC
GCTGGGAAGAGAAACCATTGATGAACAAGTCAGCTGTTGGAATATCCTTT
AATAATCAGCCTTTTGGAGAAGGCGCTGAACGTATTGTTTATCAGCTATG
TGAAATCAACCAGTATGGTAAGAAAGTCGGTGAAAATTTAGTTGCAAAAG
ATGATAAATTTCAGGGTAGTTATGAATATCTCCAGTATCATGAATCCTTT
TGTAAAACGCAAAGGATTTCTCAAAACCTGGCAAAAAAGTTTAATGATCT
TCTAGATCGATCTCCTTATGTTGGGAAGAGTGTTCCTCGTATTACGTTTC
TCGATTGTTATGTTTACACTTTCCTTGATCCAGATGACAATATTGAGTAT
AATTATTTGGCAGAGAGAGAATTGGATAATACACGGTACATAAAGTGGAA
CAATAATGCAGGAGGCGTGCATGGAATGACAAAACAAAAGCGAGTTGTTT
CACAAATTATTgaggaggaagaagaagaagaagaagaagaggaatCAGGA
CCTGAGACGACAAAGTTTGAAGAGGTTGATTCTGCTGATGAAGAGGATCA
TTATGGTGGCctagaaaaaattgaatttctatcAAATGTTAGTGctaaaa
atgttgatattttggACGAGGAAGTACCGCAAGCTTTCACTCATTTCACT
TATATGTGGAGCAAGAGAGAGAAGATGGTGTGTGACCTCCAAGGTGTTCT
TGATCAGGCGAAACGATTGTTTGAGTTTACAGATCCTGCTATCCATTATG
CGTCCCAAAATGGAAGGCGTCATGTTTTTGGACGAACAGACAAGGGAAAA
AACGGTatgttagaattttttaaaacacaCAAATGTAACAAGTTGTGTGA
CTTACTTCGACTCTCAAGCATTAAACggcaaaattaaATGTCATTTTTAG
ACATCATGGTTCTTCATACAAGTACGATAGAACTCATATCATCCATACAT
GGTCATCAGAGGCGAGCTGAACGGTGTATCGAGAAGAAAGATTTACAGGC
TGCGGTAAAATatgggaaaaaagaaatgtgtaGAAGATTTGACAAAGCTG
GGAGACCACTCATTCGATTTAAGTACACTTTTGCTGATGTTGTTTATATT
ACAGACGAGTCAAGTACACGAGAAATAACAAGTTATGTTTTGCCTATCCC
ACTAGATAAAGTTGATGTTCCATTGATTGATCAAAATAAATATTATGCTG
CTAAACGACGTATTGAAGAAGATCCCTCAATTATCACGTCACACTCAGTT
TTCGTTGTTGATTGTAGTGGTTCAATGAGAAATGCAGATGTTGTAGCCCA
TCGCAGTAGATTGGATTCCGTACGTTACTCCATTGCTACAGAGTTCATCG
CAAAACGACTGGACAAACCTTCCTATGGCATCACTCCATTTGATGTAGTC
ACTTTGATTGAAATGCGAGATAATGCCACtgttatttttgagaaagaacC
AATGAGCTGGATTCTGTACAACAAAATCGTTGATAGAGCTAAAGAGAGCA
GTCCATACTACCATGGCAATTATTTACCATCCATTGAAAAGGCACATCAG
GCCTTGAAAGATGGCGACCATGAAGATTTggcattgtttttgttttttct
tacagaTGGTAGACCAAGTGATTGTAATGGAGACACAAACATTCAGTCTA
TTCTTAACCAAATCTCTGAAATCGGTCAACAGTTCAAGGACCGGTTGAAC
TTTGGGATGGTTGCTTATGGTAACCAAAATGAAAACATGGAAGTATTGGA
AAAAATGACAGCAAGCTTGTCACTCAAAGGATGCACTGGAAAATTTGAGC
GCTCGGATCTCAAAAAACTGAATTCTCTATCAACGTCTATTGCTGAAATG
TCCAGTACATTGACAAACACCCGCACTTTACTCACTGCTGTCAGAAGTAG
CAAACGGAAAGAGAAAGATTATACTCTGACAAAGTTTAATAGGAATGTCA
AGATTCCAGGAATACACTGGCAATCGAAGAATGTATTTAATCATAGCTTA
ACCCGTTATGAGTTTATCCGATCTGGGAAAGGATTCCGCTGGGAAGAGAA
ACCATTGATGAACAAGTCAGCTGTTGGAATATCCTTTAATAATCAGCCTT
TTGGAGAAGGCGCTGAACGTATTGTTTATCAGCTATGTGAAATCAACCAG
TATGGTAAGAAAGTCGGTGAAAATTTAGTTGCAAAAGATGATAAATTTCA
GGGTAGTTATGAATATCTCCAGTATCATGAATCCTTTTGTAAAACGCAAA
GGATTTCTCAAAACCTGGCAAAAAAGTTTAATGATCTTCTAGATCGATCT
CCTTATGTTGGGAAGAGTGTTCCTCGTATTACGTTTCTCGATTGTTATGT
TTACACTTTCCTTGATCCAGATGACAATATTGAGTATAATTATTTGGCAG
AGAGAGAATTGGATAATACACGGTACATAAAGTGGAACAATAATGCAGGA
GGCGTGCATGGAATGACAAAACAAAAGCGAGTTGTTTCACAAATTATTga
ggaggaagaagaagaagaagaagaagaggaatCAGGACCTGAGACGACAA
AGTTTGAAGAGGTTGATTCTGCTGATGAAGAGGATCATTATGGTGGCcta
gaaaaaattgaatttctatcAAATGTTAGTGctaaaaatgttgatatttt
ggACGAGGAAGTACCGCAAGCTTTCACTCATTTCACTTATATGTGGAGCA
AGAGAGAGAAGATGGTGTGTGACCTCCAAGGTGTTCTTGATCAGGCGAAA
CGATTGTTTGAGTTTACAGATCCTGCTATCCATTATGCGTCCCAAAATGG
AAGGCGTCATGTTTTTGGACGAACAGACAAGGGAAAAAACGGTatgttag
aattttttaaaacacaCAAATGTAACAAGTTGTGTGACTTACTTCGACTC
TCAAGCATTAAACggcaaaattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:119773..121809 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1612-2028:1621 |
| Aaloc | 1-1611:1 |
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