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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:96390..101979- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018474 ID=XLOC_018474|Name=XLOC_018474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5590bp|location=Sequence derived from alignment at sc0000279_pilon:96390..101979- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGACAATTTGCAAGATGCTCAACAACAACAACTGTTTACTTACCG
TGAAGGATACCTTCACAAAAAAGAAGACGAGAAAACAGTATGTATTTAAC
GCTTAGTGTTTATTATAAGACACTTATTTCTTGATTCCAAAGTCAACTCC
ATGAAAAAGAAATTTTGCAACTCCGTAAAAATTTGTACCTGTTTTACATT
ATTTTTTACCATGGCTTTTACCCATTTAAGGACTGTTTTAACGTCTGTCC
AGGCAAAAGCTAGAAATTGAGAGCTACCATATAGAACTACCTGGCCACTT
ATCGCGCTATTCAGTTCAAAAGGCCTAATTAACTGGACTCCAGGCTAACC
CACTATATGCATTGGTTAATATTTAAAAATATTCAAAAATGATCTTGTTG
CTTCAATTTCAATTGCATTTGTTTTACATTTGTTTTTTTCTTAATGATTG
TATACTTTTACTTCCCATTTAGTGGCAAGAATATTGGGTTGCATTGCGTG
GAAATTACTTATCATTCTTCATACACAAAGCTTCTACTGGTGAAATTATT
GACCAGGTATTTACAAAATACAGCTATTTGAGACCATTTTGAATAAGCCT
CCTCTTCTGCAATATCTCTGTCTCTGTTTATTTTCATTGATTAGATGTCA
AAGGCTCTTTTTTTCCCATAGCAATTCCTCAGAGAATTTTCTTGAAGAGC
TTTAGGCCAAAGGATCTATTATAATATCAGTTTTTCAACTTTTTCATCAT
TTCAGTATTGTGGATGTATCAAATTGAATCCAAAAGCCAAATGTATCACA
GCTAAACGAAAGAATTATAGTTTCCCATTCTATTTGGTGACAGATAAAGC
AAGATATTTATTCAAGGTAGAAGCTTTTTTTTCGAACGTAATTTTTCATG
AATGGAATGATTTTTCGAACTGATTAACCTGCTTACAGTTACACTACCCA
TGCACTATAGCACCAGTATGTATCAACAAATGGCCGAGCTGGTCAATTGA
ATAGTAAATTGTAAAAAGAACAAAATTAATGTTGGGCCATTCCAAGAAAT
TGTCACCCACGATTAGACTATGCCCTATTGAAGCGTCTCTATTGGTGCTA
TCAAATGGTGCTTGGTCGTGGCGCTGCTAGGTCCCTACTGGACAGGGGGT
ATCCAGTCAAAAAAAGGCGTAACGTCACGTACACTTTCCTCAGGAATGAC
CGTTCTACATTTTAATTTCTTGACTGTATAATTGACAATAGGCTTTTTGC
GATAACGATATTAGGTTACATGAATAAATCAAATATTAACATATAGACCT
GATCTTCTCCACCTTTCAGACGAGCTCCAATTTGAATCGTCACCAATGGT
TTAATGCAATAGAACAAGCTGCACAGGTTTGCATTTTCATCTTTTTTATT
TCTCAAAACCACCTTTAAAGAGTTATTTTAAGTATAAACCCGTGTACAAG
AAAAAAGAAAGGGTTCTGGAATAACGAGCGTCAAATGAAAATTCTAAAAT
GTTAGTAGTTGATGAATGATGGATTTTTACTCTCTTAAAAACTTAACTCT
GATTCAATATCTTAAGATAAAAACAAGAAATCGACATACTGTACTTTTGC
CCTATGTTGGGCTGAAATCATTGTTCTTTTTTAATAAAAGATATGTTAGA
ATCAAGTTTTTAAGATAGAACCGTGATTGAGGATAATCGAGAATTTTTGC
CAGCACGAAATTCTAATGAAACGTCTTTTAAAAAGATATTTTACTATGCA
GGCTTTGATAAAAATTTCTTAATCATTCTACAGGGTAAAGAGCCAATTGA
ACACACCTTCTTGCCTCCACAGCAGGACAAAGCACTACCACCCAAAATAG
CACTGAACAAAGATGAAGTGGACAACAAACTTGTTGAAGATAAAGAATCA
TTGATACCTGATGAAAGTGAAGAAGAAAATGAAGAAGAGAAAGACGAAGG
TTTTGAGGAGGAGCGAATCGCATCACCTTGCGTTCTTATCAACATACAAC
AGGTTCGAAAAGTATTCCAAAAATTGTATGGGTAATGTTTTATTTCGATT
TTACTTGGGTCAAAAGCTAGTTCATTAGTTAGGGAATCGTGGTGTATATA
GGTAGAGTATTCGGCTACTTTGCGCAAGTCGAGGCTCTTGTCAATCCCTG
GTCAGGTTATAGATACCAGAAACGCCAAAGTTGTACTTGATGCCTCTCTC
CCTAATGCTCAGCGATTTAAAAAAGAAGAAAGAAGGGTAAGTGGGGGCAA
CGTAGGGAGAAAAAGGCTTCCTTGCTATTATTTTGTCTTTTTTGAGCGTC
ATTATAATCAAGATAACTATTTTTGTTTGTTATTACAACTAGTTGGCTGT
ATGAATTCACTTCCAATTTCAAAGTAGCTTTTCATCCTTTGGTTGGAATC
CTGCTACGTAAATACCAGGTCAAAATCCGTAATTTTTTTTCTCAAATATT
TTAGGCGAATACCGATAAAATGCAAAGTTGTTTTTTGAATGGTTCACTCA
CTGCGCAAGAGAATCTTTCTTTCGAGGACGAAATTTCGGATGGTAAATAT
GTCATTTTTTTATTTTTCTCGAATGATTGCTGTTGAGTAGGTCATTTATT
GTTAACTAGAAAACATCAATACAATAGCTCGAAGAATGGCAATAAAACAG
ATTTAACTTTCAGAGAATCAAAATACCCAGGTTTTACTTCTAAAGATGAT
TGACAAGAGGGACATTTTTAATAAACTAGTTTGCTGTTCAAGTACGGAAA
AATTTCCGGGTTTTTTTCTCGATATTGTAATGAACAACCTCTCTGCTTTT
CGCATTCTCAAAAAATTTATATCAATTGACGGATTTGTTCCATAAATATG
GATTCAGAACGTTTCTCTTGTATAATCCGGTTAATCATGTAACCATGTGT
ATTCTTGAGAACGGCTGATTCAAGCAATGTCATTATTTTTCTTATGAAAG
GTTTCGTGTGAACTTTTCAGTCTTTAAAGGGTACTGTATTACCTAGCGAA
AATAACAAAAAAGTTGAAATTCTATGCTATCATGTTTTCTTATGTTGAAG
TATTCAAGTCTGGCTGTTTTGTTATTCAGGGTTTATGCTTCTAAGGTCTC
GCCTCCAGACGGCTGATTTACATTGAATTTTATACGCGAGCGTTTTTTTT
TCATAGTGCTTGTTAATTTTCTTTCTTGATTTTTGACGAAGACGTTCTTA
CTCTTTTTTTACTTTCAAACGATAAATGCGCGTTTTGATCAGAATTTAAT
CTCCTTGTAAATTGACTCCACGCGCGCTCTCTTGTTATAAAGTCTCTCTT
GTCGAGAAAGAAGCCGTAATATCTGTGAATATGAAGATTGAAATTAATAT
GTTTTTTATTCTTTTTGACTGTGTATAAAATAAGAAGATATATCTTGTTC
GAAAACAGTGTGGTTCTGAAGGGTTTTTTTTCTTTTTACCGCGTCTGTTA
GAAAGTGGTCAACCAGCGCTTTGAAGTTCTTTTTATTAAGCTGTGTTTTT
TCCTTTCTTTCTTGATCATGCTTTGCTATTGAAAAAATGTAATTTTGAAA
TTTTGGTCTTGTCCCTTTTTCATTTCAATGTCAACATTTTTTAAAGCTGG
TTTATATCATTTGTCACTGCTTCTAACCGTATCTCATTTTTATGTACTTT
CTTACTCTCGTATGTAGGAAAGGCATATTTGGGAACAGCCCTTCTATTTA
GCTTTCCTTTAAATATTATAGTTTAATGATTGTATATACATTGATCAAGT
TCGTGGATTTTGTTGACAGTCCACTGGCTATTCCTGAGTCTCGCCTTCTC
GCTTTTGCCAAGGTTTTTCATAGAAATAATAATTTACTAATTTACATGGT
AGATGACCGAGATTGGATAAATGTGTTATTACCTGTGTCTAAGGGAATAT
TCAATGTGGTTTGACATCAGGACTGCATGTTTCGTATGTTTTATAAATTA
GAAGGTTCGAAAATCTTTGGAATAAGAGAAATACTGTTTTGGTCACCATA
CTTTTTTACGATATTGAATTGTCGGGCTTTATTTCGTCACAAAGGTTTTA
ATTTTTTTAATTTTCCAATTTCGCGAACTCGAAAACAACCAATTTCCGTA
TGATAGGGTATTCTTTCAACCATTCTTTTTGGATATGGAGCATCCAGTTT
GAAATAAAATTTTCTTGTGATCTCTTCTTTGTCCTTTACATTACTGAAAC
TTTTTTAATTACATCTCTCTTATAATACAAGGGGAGAGGTGTTATGTTGG
GTTTTACATATTGTGAACAAAATGATTATTATGAATTAAACGAAAGAATA
TATTGGTAAAGAAGAAAAATGTGCGAAACACTATAACAATAAGTTTTTAA
TATTTTGATTGATATAAATATCGTTTTGATTCCTTTTCAATTTAAATATT
ATTTTTTACTGTAGACAGACTGATTGAAAGATATCGAGAGATTTACTGCA
ACGAAGAAACTTCTACCAAAATGATCTCACAGAAGAAAGGTATTGCTTGA
ATTACAGAAATTTTCAATGGCTTGTCTTTGTCTTAAGCCCATAGGTTCGG
GTTACTCAGTTGGAAGAGCATTCGCCTTTCAAACTGGGGTTGGAAGTCGA
TCCTCGGTTGTCGCAAACTTAGCAAATAAATACACATTTTTTAAAGCAAG
GTCTTTTAGACTCCGCGAAGCCTTGAAATGTTCAAAAATTTTCGGCCATC
GAAGCCTTACGTTTTTAGAGAAAAACGTGCAAGTGTTCATTTGCTGCTAT
TAATACAAAGAAATTTTGAGAATCTGTTTTAACATTTCAGGAGATCATTT
GGATGGAACTCCAAAAGCCGTGACGTCATACAACTATCCACAAATATCCA
AAAACTTGTTACGCATCCAATCACAAGATCGAATTACAAGGCTGACCAAG
TCTGCTGAATCTTTACGAGGTATGTTTGAATATACTTTAAGTCGAACCCA
CAACTTTATACCACTGGATAACTGCATTGTTACTAGATCTAAAATGCCAT
TATTTCAAAATCACTTTAAACAAATACTAAAAAAGACTGAAAATTAGATA
AGTAAGTCTGCGACCGCGCTCGGAGGCGACCCGAAGGCTCCTCTTTCGAT
AGCTCTCTACCCGGAGGTAGGGGAGGGCACCACTATTTCTCCCTGTATAG
CTCCGCTTACCCTTGATTATTCTCTTAATTGCTGAGCATCAAGTAGAGAG
GCATCAAGTACCATTTTGGGAATCTTTGTTATGACCCGGCAGGGGGTTGA
ACCCATAACCTTGCGCACCGTAGCCGGATGCTCTACAACTGCACTATGGT
CGCTAAAATGGCATACTTGGAGATTCTATGGACTAATAACCTCGCTACCT
GGTCGCCCTATATACATTTCATCTCGTCTCTGATTATAACTCTTCCTTTT
CGTTCCTACAGGATTAACATTGAACCAGTCGTCCATCGAAGCAAAACTCT
CCACACAATCAACACAACAAAATCGAAGCTTACAATCTCGTAAAAGTTTA
TTTTCAAGGCATTTGATTGGTTCAGCACCTGAAGTTAAAAACATTACTAA
TCGACATTTTAACAACATAGCAGGTGGCCCTGGATCATAA Coding sequence (CDS) from alignment at sc0000279_pilon:96390..101979- >XLOC_018474 ID=XLOC_018474|Name=XLOC_018474|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000279_pilon:96390..101979- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAGACAATTTGCAAGATGCTCAACAACAACAACTGTTTACTTACCG
TGAAGGATACCTTCACAAAAAAGAAGACGAGAAAACAATGTCAGACAATT
TGCAAGATGCTCAACAACAACAACTGTTTACTTACCGTGAAGGATACCTT
CACAAAAAAGAAGACGAGAAAACATGGCAAGAATATTGGGTTGCATTGCG
TGGAAATTACTTATCATTCTTCATACACAAAGCTTCTACTGGTGAAATTA
TTGACCAGTGGCAAGAATATTGGGTTGCATTGCGTGGAAATTACTTATCA
TTCTTCATACACAAAGCTTCTACTGGTGAAATTATTGACCAGTATTGTGG
ATGTATCAAATTGAATCCAAAAGCCAAATGTATCACAGCTAAACGAAAGA
ATTATAGTTTCCCATTCTATTTGGTGACAGATAAAGCAAGATATTTATTC
AAGTATTGTGGATGTATCAAATTGAATCCAAAAGCCAAATGTATCACAGC
TAAACGAAAGAATTATAGTTTCCCATTCTATTTGGTGACAGATAAAGCAA
GATATTTATTCAAGACGAGCTCCAATTTGAATCGTCACCAATGGTTTAAT
GCAATAGAACAAGCTGCACAGACGAGCTCCAATTTGAATCGTCACCAATG
GTTTAATGCAATAGAACAAGCTGCACAGGGTAAAGAGCCAATTGAACACA
CCTTCTTGCCTCCACAGCAGGACAAAGCACTACCACCCAAAATAGCACTG
AACAAAGATGAAGTGGACAACAAACTTGTTGAAGATAAAGAATCATTGAT
ACCTGATGAAAGTGAAGAAGAAAATGAAGAAGAGAAAGACGAAGGTTTTG
AGGAGGAGCGAATCGCATCACCTTGCGTTCTTATCAACATACAACAGGGT
AAAGAGCCAATTGAACACACCTTCTTGCCTCCACAGCAGGACAAAGCACT
ACCACCCAAAATAGCACTGAACAAAGATGAAGTGGACAACAAACTTGTTG
AAGATAAAGAATCATTGATACCTGATGAAAGTGAAGAAGAAAATGAAGAA
GAGAAAGACGAAGGTTTTGAGGAGGAGCGAATCGCATCACCTTGCGTTCT
TATCAACATACAACAGGCGAATACCGATAAAATGCAAAGTTGTTTTTTGA
ATGGTTCACTCACTGCGCAAGAGAATCTTTCTTTCGAGGACGAAATTTCG
GATGGCGAATACCGATAAAATGCAAAGTTGTTTTTTGAATGGTTCACTCA
CTGCGCAAGAGAATCTTTCTTTCGAGGACGAAATTTCGGATGACAGACTG
ATTGAAAGATATCGAGAGATTTACTGCAACGAAGAAACTTCTACCAAAAT
GATCTCACAGAAGAAAGACAGACTGATTGAAAGATATCGAGAGATTTACT
GCAACGAAGAAACTTCTACCAAAATGATCTCACAGAAGAAAGGAGATCAT
TTGGATGGAACTCCAAAAGCCGTGACGTCATACAACTATCCACAAATATC
CAAAAACTTGTTACGCATCCAATCACAAGATCGAATTACAAGGCTGACCA
AGTCTGCTGAATCTTTACGAGGAGATCATTTGGATGGAACTCCAAAAGCC
GTGACGTCATACAACTATCCACAAATATCCAAAAACTTGTTACGCATCCA
ATCACAAGATCGAATTACAAGGCTGACCAAGTCTGCTGAATCTTTACGAG
GATTAACATTGAACCAGTCGTCCATCGAAGCAAAACTCTCCACACAATCA
ACACAACAAAATCGAAGCTTACAATCTCGTAAAAGTTTATTTTCAAGGCA
TTTGATTGGTTCAGCACCTGAAGTTAAAAACATTACTAATCGACATTTTA
ACAACATAGCAGGTGGCCCTGGATCATAAGATTAACATTGAACCAGTCGT
CCATCGAAGCAAAACTCTCCACACAATCAACACAACAAAATCGAAGCTTA
CAATCTCGTAAAAGTTTATTTTCAAGGCATTTGATTGGTTCAGCACCTGA
AGTTAAAAACATTACTAATCGACATTTTAACAACATAGCAGGTGGCCCTG
GATCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:96390..101979 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 856-1032:178 |
| Aaloc | 727-852:799 |
| Aaloc | 652-723:1175 |
| Aaloc | 562-648:3137 |
| Aaloc | 343-561:3808 |
| Aaloc | 286-342:4272 |
| Aaloc | 175-285:4836 |
| Aaloc | 91-174:5119 |
| Aaloc | 28-90:5567 |
| Aaloc | 1-24:5591 |
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