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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000279_pilon:53116..57634- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018472 ID=XLOC_018472|Name=XLOC_018472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4519bp|location=Sequence derived from alignment at sc0000279_pilon:53116..57634- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCTCATCCTGGATAATGATGCTGAGTTTAACGATCTCGTTTTTGAT
TTTCACACCAATCTACGGACGTCCCCAAAAATACAAAAAGGTATTACTGA
AACAATCTTTCTACCTACCCAAAAATTCATCTTATGAGGCATAGATTCTC
GAGCTAAATCTTAAGCTCGGTTTATTGGCAAAAAGACTGGTGATCTTCGC
CATGGTTGTCAATTGATTGAAATTTAGTATCTATGAAAACTTTGTTTGTG
AACTTTTAGAATTGGATTTGAGAGATGAATATTGTTCGATAAACATTATT
CCTTGGAAAATGAAATTTACTAGAATAAGGCGTATCTCTAAAGTAAATTT
TGCTCTTTAAAATCGAATTTAAAAGGTATATTTTCATTGTTTAGAACACC
AGACGAGAGTCAAGCCATCACGGTATGCAAACCCATCTACAGACAACCTG
TCCTTCACATCCACCATTGAAGGATATCGACCACAAACGTTGCATGCAGG
TGTATGATAGTTGTGGACGCGATATGGATTGTGGGATAGGAATGAAATGT
TGTTTTGATGGTTGTGTTTACATGTGCACTGAACCAATCGTCAAGAAAAC
TAAAAGTAGGAATTTTGTGCCCAACCCTTATCTTAAAACCTAATCCACAT
ATCAACTTTAATCAACTTTAAAGAGCCTGTGCTGGAATTTACCAGGGTTT
GAATGACGTCAAATACACCCCCTTCTCGCAGACCCACTGGAAAGGGCCAC
TGGAAAAATTGGCCAAAATATCGTCTTCGGTGGAAAATTACCCTCCGATT
TTTTTCCCACTGATAATAACCAAATGAACTAATCCTCACAAAAATATTAT
GTTTTTTTCCCACCCTACTGAATTTTCTTACTTGAAAACAAAGGAATTGA
AATCCCCAGCCATAAAAAGATATCGGAATATCAATCCCCATCGAGCTTCA
GTCAGTTATTTTTATCCCAACTTGCTTGCAGATTTCACTGAAGATTGGTG
CCTGTGCACCATGAATCTCTGAGTTTGAAACAAAGATATTGTGTCAAAAT
GCTAAACATTTCTACCGGGTCTGTGAGAAGGGGGTGTTCAAATAGGATTC
GCAGACAGATGTAGACTTTTTTCGAACGTTATTTTACCCTGGTAAACATG
AATACATGTTGTCCCTTGTTATTGTGGAATAAGGGTTGATGGGTGTATAG
TACCCAGATGATACAATAGGCCCTGCGTTGTTATAACGTTATTTGAACAT
TGTTTTGACATTCTGTACTTGCCCTATTCTGCTTGTTTTTTCTTATTTAA
GCCTACCCACCTTGTTATTCAGTTTTCTCTGGAAAAGTTTTAGATTATGA
ACATCCTTTGACTAAATTTCTAGGGATATATTTTGAATTTCTCCTTTAAA
GCCATAAAATAATATTAATATTACAATGGAGCAATGTGATCGATTTTCTC
GGTAAATTTTGCGTACTTGCCCTGTGCTTGCAATCTTAATTATTACCATA
CTCTAGTTTTTGATAGAGAAATCTAAAATAGCAAGACTACTCAGTTCCTT
CGGAATTTCCGGGTCGGTAAATGAACATTTGATGTGGATAAGAAAGGATA
TGGAAATCCACTGTTTTAAATGCACCACCAACTTTAAAGTGTCTTCAAAC
TGTTGATCACAAAAGTGTAATTTGGTCCCAGAACCAAGGGAATTGATATA
TGTAATGAATTTACGCGAGAAAGATGCTCATGATAGATGATCAATTTAGC
TTTCAGATTGATGCTTTATCCTTTTAGGTTTAAGCATTTGAATTCTTGAA
ATCTTAGATTTAAAACTTTTTTCAACAAGGATTTTAAAAAGGATAAATTT
AATAGAACATCTTACTCAATGACGCACGTGGGTTTCTAAAGTAGGAGGCG
GAGGGATTTTTAAATAAAAAAATGCTGACTTCATGAATGAAATTCGAAAT
GACATTTCTCTAAGAGAGGATTTTTCCTCTCTCTCTTTGCTTTATCAATG
GTCTTATACGTATTTTCTGTGAATGAAAGTCAACGGTTATCAACAGTGAT
TTGATGTTATGTTATCCAATACACTATCTCTCTTTCTCTCCTTATCAACT
TGCTTTCATTCATAATACCAGATATTTCTACTCTAATTTTCATGTTGTGA
TAACAAGAGCCGTTAAAGTTGATATTTGGTAGCAAAGTAAAATGTAGACA
TTATAGTCTTCAGATAAGAGAAAAAAGCTTTTATCTTCTCTTAAAGCCTG
TGAAGCTCATTTCTAAATAGCCCCCATCTACTTTCCAATATAAATGAATA
TTGCGTTATTTCAATACAATTTTAGAAATTGAGCCTTTAAGAAATACTAT
TACATCAGTCAAAGGGAAGAAATACCTATGAACTGGTTATAAACTCTTTA
AATTTGAAGATTATCGATCATAAAATCTTATCATTTTTTCAATCTCTGTA
GCAATCAACAAGATGAATACACCATTACCTCCAAAAGTATCAGGTTCGTG
ATTTTCGACTTTATTGATTTATATCAAAATCACCTGGCCTGGAGCTTTTT
CTAACTTTTCTTAGATATCATCACATAATTTATAATACCAGGGGGAGTAG
GGTATTCGAATCTCTGAAGACCGAACCTTAGAGAGACTAATTTTTTTGTA
AAAAAGTTGTTACTCTTAGTCAGAGTTTCTCTGCGAAAAATTTCCTAAGA
GATATTTTTGAATTTTATGGTTTCAATACCCTTAATAACCGAAAAGGGGA
TAATCATCCCAACCCTTATAGGGACTATTGTTACTTTTTTGTAGTACAAA
AACTTGGCATGTCAAAAATCTGACTCTCATCGTCCACACATACCCAACAT
CTATTTTATTGTTTCCATGTACCCCCTACTCCCGTTTGTAAAATACAAGC
TTACCTGATGAGAATAGTTACCCAATGTTCAAACACTACTCCTAATTAAA
TTTTCACGGACTTGGATTATCTGTTTGTATGAAAACATTTATTTTTCTAC
AGGTAACAGCTGGCAAATTGAGAGTAATACACGGCTAGAGAAAAAAGTCA
CATGCTCGACTAGCAATTTCACAGACCACGAACCAATTCCATGTCGGAAG
GGCTATATGTGTGATATACAACGACATGAGGATGAAAGGAATTCGATCCC
AAATCGAGGCTTTTGCATCAAGAATCCCTTCAAAGGTAAAGTATACTTCT
GCATGAGAATTATCAAATCATTATCAACATAACTCAAGATCACGATCAAG
ATCATAGACTCAGACACCAGAGCCTTAGGTCGGTCTTTAACTTTTTCTTT
TGATTCACTCAACAAATACCATAAACACCACAGCTTAGCTTTCTCTGAAA
TTAAACTGTGGAGACAAACTGCAAGACTTTTATCGCGCATGTCTGATAGA
GAGCAAGATAGAGAGCACATACCACCATTAGCTAAAGTAGATCGATTCCT
AAAACTATATAAAAATATGTGTGCTATGCGCCGAGATTATCCTCTTTCAA
TGAATCTTTTTTACGTTTCTTATTGTGATTGTTTGGTACGACTTTCATCC
AAGATCTTGGATGATTGCCATGGTTAAGTTTGTTCTCCCTGAGTGCATGT
TGAATGAAATCGCAGTTTCTCTTCACAGGATGATGTATGTGATATTTTCA
TGTTTCTTTCTTTCTTTTTCAGAAGTCGATCCGTTTAAGCCAATGGTAGT
GTGGGACGATGTAGACACAGGTACGTTGTCCGTCATTCTCATAGAATACC
AAACCTCCGCTGATATTCTACATTTTGCCTCCGGAACTAGTATTACTCTC
GACAATGCTAAGCTTTACCAACGTGTAAAAGAAGGAATTTCTAATTCAGA
GTAGGCCCAGAAAAGGCCCTATATCATCAACCACTTTGAATTCTCGAACA
TCTCAACAAGAACTTCCTTTCATCAGAATATCTTCTTTTATTCTTAGGGT
GCTATTATCGAGGTCGAAAGCTGAAGGATGGAGAATATTTCTTCAATAAA
TGTAATTTCTGGTAAGTTTTTTTTTAACTTTTCTTTATTGTCCACGTTCA
TACTTTCATTTGAGAATCAAGAATCTTTCCCTGGTCTTATACAATTCATG
AAATCGCCACCTGTTTACGTGTGGCGTGATTGGGGCTTTATTTTGCGTGG
AGGCGTGATTCCATAATTTTCCGGCGCGATGTGTGATAGGGCAAGAGTTT
GATGCGTGATTTGGCTATTTTTAGCAATTTTTTTGCACGATCGTGATGAG
ACCAAAATTTGGCGTGATGACTCTCACCCCGCTGACAGGACCTCATTTTG
TTCGCAGAGATAATTTTAGTAGATGAATTTCATGCATGGGGAATGTGATA
GGGCGCCTTAAGTATAAACTTCTAAGCTATATTTCCGCTTGATTTTTATT
TCAGCTTTTGCTCGAACACTATTATCAATTGTCAAACAGCACCTTGTCAT
TCAACCAAACGAACCAAGCTGTCTCGATTACCCATCTCTTATAACGACGA
GTCAATGAATTATATATAA Coding sequence (CDS) from alignment at sc0000279_pilon:53116..57634- >XLOC_018472 ID=XLOC_018472|Name=XLOC_018472|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000279_pilon:53116..57634- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATCTCATCCTGGATAATGATGCTGAGTTTAACGATCTCGTTTTTGAT
TTTCACACCAATCTACGGACGTCCCCAAAAATACAAAAAGATGATCTCAT
CCTGGATAATGATGCTGAGTTTAACGATCTCGTTTTTGATTTTCACACCA
ATCTACGGACGTCCCCAAAAATACAAAAAGAACACCAGACGAGAGTCAAG
CCATCACGGTATGCAAACCCATCTACAGACAACCTGTCCTTCACATCCAC
CATTGAAGGATATCGACCACAAACGTTGCATGCAGGTGTATGATAGTTGT
GGACGCGATATGGATTGTGGGATAGGAATGAAATGTTGTTTTGATGGTTG
TGTTTACATGTGCACTGAACCAATCGTCAAGAAAACTAAAAAACACCAGA
CGAGAGTCAAGCCATCACGGTATGCAAACCCATCTACAGACAACCTGTCC
TTCACATCCACCATTGAAGGATATCGACCACAAACGTTGCATGCAGGTGT
ATGATAGTTGTGGACGCGATATGGATTGTGGGATAGGAATGAAATGTTGT
TTTGATGGTTGTGTTTACATGTGCACTGAACCAATCGTCAAGAAAACTAA
AACAATCAACAAGATGAATACACCATTACCTCCAAAAGTATCAGCAATCA
ACAAGATGAATACACCATTACCTCCAAAAGTATCAGGTAACAGCTGGCAA
ATTGAGAGTAATACACGGCTAGAGAAAAAAGTCACATGCTCGACTAGCAA
TTTCACAGACCACGAACCAATTCCATGTCGGAAGGGCTATATGTGTGATA
TACAACGACATGAGGATGAAAGGAATTCGATCCCAAATCGAGGCTTTTGC
ATCAAGAATCCCTTCAAAGGTAACAGCTGGCAAATTGAGAGTAATACACG
GCTAGAGAAAAAAGTCACATGCTCGACTAGCAATTTCACAGACCACGAAC
CAATTCCATGTCGGAAGGGCTATATGTGTGATATACAACGACATGAGGAT
GAAAGGAATTCGATCCCAAATCGAGGCTTTTGCATCAAGAATCCCTTCAA
AGAAGTCGATCCGTTTAAGCCAATGGTAGTGTGGGACGATGTAGACACAG
AAGTCGATCCGTTTAAGCCAATGGTAGTGTGGGACGATGTAGACACAGGG
TGCTATTATCGAGGTCGAAAGCTGAAGGATGGAGAATATTTCTTCAATAA
ATGTAATTTCTGGGTGCTATTATCGAGGTCGAAAGCTGAAGGATGGAGAA
TATTTCTTCAATAAATGTAATTTCTGCTTTTGCTCGAACACTATTATCAA
TTGTCAAACAGCACCTTGTCATTCAACCAAACGAACCAAGCTGTCTCGAT
TACCCATCTCTTATAACGACGAGTCAATGAATTATATATAACTTTTGCTC
GAACACTATTATCAATTGTCAAACAGCACCTTGTCATTCAACCAAACGAA
CCAAGCTGTCTCGATTACCCATCTCTTATAACGACGAGTCAATGAATTAT
ATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000279_pilon | genome | sc0000279_pilon:53116..57634 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 640-753:115 |
| Aaloc | 577-636:571 |
| Aaloc | 529-573:846 |
| Aaloc | 346-525:1516 |
| Aaloc | 304-342:2067 |
| Aaloc | 91-300:4126 |
| Aaloc | 1-90:4520 |
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