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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000376_pilon:151367..158718+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018371 ID=XLOC_018371|Name=XLOC_018371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7352bp|location=Sequence derived from alignment at sc0000376_pilon:151367..158718+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCAATGAAACCAGTTTACAAGACTGATGATATTGAAGTTTCTGA
TATTATGTACAAAATGAAGAGCTTACACTGTGAAGAAACTACCACAGGGT
CAAATgtaagattttatatttttgtgtaTGTTTCAGTAGATCTAGGGtac
ctaggggggggggggctgttggCTGTCTTGTAGAAGACAAAACAATTAGA
CAATGTTATCATTAAAGGCCACTTTCCTTAAGAATCCATCAGCAAACCAC
ACCATCAGCAAACTGAGGAAGTGAATATTTTAAATTGACTCGAATCGGTA
TATTTTGTTTCACTTTATGATGAATACTATTATTATGTTGTGTAGCATCG
CTCCATCgctgtaaaatttttttgaatgctAAGAGACAATTgctgacagt
tacatcaatatgccaaaagcATTTTGTTCAatcaccttcacttcaagata
ggccaccaccatagaatgaacttccttttatataggatgaaccatattca
tgtggctttctcagccttgcactccatcacagagcctatttgagatattt
tactaactagcctagagaaaaattttaaacctttattatttgaatgtgTG
CCTTTTTaggtagggtgcgcactcgtcgggattttttgcgcggaacgagg
aagaatttacaaaaatgaacttcaatgaattagtacttacctttgaatca
tccaaatctgttcattcttttttttaaatcaatcaggaattatcagggaa
acaagtaaaaaaaactgcatccaggtatctattttctttccaaagatatt
catgtttttcgacgtcaaggtgaaaacgcgatttagcgctgaccacggca
ccggaaaattctcgacccacattcaaacaaatggctgtcgctattgagct
ggttcatcttttcaatcgcggtttttttagtaaacccagggtaagattag
gctacaatctatcacatgctgctttatttgaaaacctAAAGGCtgtctgg
aattttgaaaaaatagaaggaattgcaatttttcaacaagattgcggatt
ttttcatgtaagcagcatacaccatctgaaagctgaggatttcagctttc
tagtggtgaaatttgtttttagctatcatttccagctcattagcgataag
ctaaagtttaacagtcatcgggccgattttcagaccgtaccggcaaaact
ccccacaccccgccacactggaagactagatttcatccgccatttttggc
gcgattttggtgcttccgaaaattatttcttgctggcgtggtgtaaggag
gcgattctttgaaaaggtgatttttttgtgttttgaaaatggaataactt
tgggaatacttaaccaattctaataaatgacccctcatttttctcacaaa
ggtaaggactttcaaataaaattagtttggtttctaaaaattgaggggaa
aattttggcctgtccaccctattttaggggggggtttcatggttggcgga
ggagcggaatcggccctttttttggacggagtggcggaatttggcgaaaa
tttagacagaattacggaaattgggttctctgacggagacagaaaattag
acaatttttgtgcggaaaaacgaaatttagcaaaaaaatttccggaattt
cggaattggtaaaagatattcaaaatttgcagaattttggacaaaaatat
tgaatttcaaaggaattttcggtgacagaattttggttcaatttaaagac
ggtttgacggaaattggagaaaaaattgacggaattgcgggatcgggtac
cccctgaaacccccctttttaatactcaaatataaaaaaattaaaatttt
taacttggtcattttagtcaaaaaagtcattaaaattgattagcctctgt
gatggagtgcaaggctgaaagccacatgaatatggttcatcctatataaa
aggaagttcattctatggtggcctatcttgaagtgaaggtggttgaacaa
agtgtttttggcatattgatgtaactggcTGAAGAGGGATTTTGACCTCA
AATCGTGCTTGAATGATAAAATAACCCAGAAGTAATTAATCGAACCATAT
CAAAcagtattttttaaatcaaactttGTCGAATTTAATGGAACTTTGCT
GTCTCATTAATGTTCAACTAATTTGGTGGTCAAATTTTAATcgaataccg
tcaactgctctaacttgggacaattggtcaaaacatgggactgttgatat
ctgttattttcacttactgttaaatctctatGACAACAATCGTCGCTGCA
TGTAGAATAAGAAAACCGTATCtccattttcataattttgagaaagtttc
agTGCCTGTGACTCCATTTCTTAGAGTTATGGatttcttttctaaaaaag
gcTGTCTCGATGCATCAAGGATACATTTTAGAAGAAGAAAGCCGTATATA
ACTCCAAGAAATAGACTAACAGCTTTGAAGTTTTTGGAcctttctgaaaa
ttatgaaaatggaGATACGGCTTTCTTATTCTACAGcgacaaaatttgtt
ttgataacttcattaagtttatcaatcatactttctgtcataacatgtca
caataactttcactgattgtcactgatagcgcgcccttctGCGCCCTTtc
taacttttttgttttcattcaaaatgaccggacgccgattggagaattag
agaacacccACCGCCTAACCGGCTATCGCccatcgcccgatgggattaat
aACTTGCCGCGCgggtgacgtcaaacgctccatcgtttgcTTCTAATTTG
GtttttttCGTTCCAGACAATCGTGTGTGTTGCACTACAaatctttttca
tgaaaaaatataatatgaatattttgatttaaaagcctacttcgatttaa
attttaactttgaattatatttgctcatctcttagaacaaccacttcaaa
aaaccataacatttgacataaactcaagctgaaaaatcaccaacACCAGC
GAAagtacaaaaataataaaatagtaaattattctcctgggaatagaacc
agccaaatgatcaaatcaaaacattgatctgaaccccctGATTTACAGCG
GCTTTTGCTAATGTATTGGGCTTCACCTTGTATATCAAAACGAcggtttt
attatttttttgcatgTGAAAGAATGTGTGGcatcataattactgctttc
agtttgcgtgttttgaaagtttgatgtgtgtactccgtctccgtggaatt
ttttaatggcatgaaaacagaatatgctatgtctttaagaacaaatttct
aaaaggcttttgctgttctgtaaatatttttttttggattaagaaattcc
atcttttattgttctaatggttataatatttctttataagacgcattgtt
gttttttttaaaatctttgtgtaagtttgcatattttccaactaaatcta
GCCAcagctttttcgttcctgtatttttcaTACAATTCAAGATACAATTC
CTGTATTTTTTCATACAATTCAAGACGAAAAAGGGTCTATACtctcaaat
tcttcaaaaaagtttgattaagtttgattacatcaatcgaacttaatcaa
actttattgAGTTCAATGGAACAATAATTTGAGAAAACCCTTCCAGGCCT
CTGCAAGCGGGCGCAAAAAACATCAGCAATCTAAGTTTTTTAAGTTTTGG
TATTGATCCTTGAAAtaatacttaatacttaatCGAAAGGACTATTTGCC
AACTTTCCGGAACTTTTCTTATTGTTGAACTTTGTCAAACGTAATTTTTT
GTTGTACGTAGCTTCATCCCcccttactttttttttttggggggggggct
aagaaatattttgccCTTTAAAGATTAGCCCCCAGgcccaaaatatttgg
ggggaccttgGTGATCTGACTaagactctgggggctgttcagctaatttc
aaaagatctcttatcttactattaaatcaaatataaaaagcaaaagattt
gtaaacacaaaatgttttgaaatttctcaaattttacctcaaaatttggt
gttttctcaaattttacacccttacagtgcactttttcccacttgctcac
aaatcaacccttacagttcactttccaaagtccaaacaacctacccttaa
gggccacaCGTCTgataggtcacttacctggagtgcccccccccccacaa
gtTTATCTTGGGAACTgaagtgttaggggacctagcacaaggcaattttt
gtGGGGAGCTACATTGTTGGGGCGACCTTACtctgttggggggggggggt
ggagctagaaacctggctgaagctatgttgTATTTGTTgaacatttcttg
ttgtcaaactttgtcaaacttaatcgaatactcacaattttagggACTTT
TgattcgattaattacgtctggtatAACAGAAATAATATAGACCAGCGTC
TGAAGATTCAGAAAAGatcttaaaaatggttttcgtagggcaccccttaa
aggatggcaaatttttgatattatgctcctgtgaaaggtgtagaattgac
aaaaaaattgctattcgaatctcctgcagtctTCAAGTGAATCAATTTTT
AGTTGATCAATCGAACTTATCAAAGAATCCCCCTATCAAAAATCCCCTTT
ACTAACGGATTTTTCAAAGTCTGAAAATTAAATATCTGAGGCTCCCAGCA
GATTCAGCgtgaaaaatagataaaaaatggGTATATTGGTCAAAAACTAA
AACCTACTGTCCATTTCAGTAGGTTCGTTTAGCCCAGCTAAACATACTTC
TAAACTCGCAAATCTTCAAAAATGACAAACGTGCACCACTAACTCACATT
TAGCTGGGCTTACTTAATACTTTACTACCCTCCTTGGAAACAAAGAAGAA
CAAATGAGTGTCAACAGCATATCGTTGTACACATGACTAATAGTTCTAGT
TCAAAATTTGTGTATTCAAAATCGATATTACTTAAACTGTAacttatatt
tttgatattgtgATTAGACCCTTTTCATACAATTTCATACGACAAAAAGG
TCAATCCTACAAGCAGAATAGAAgtgcaaaattttcaatttacgAAAACA
CTTATTATCTGTAAACTTTCAATATCTTGACAGATCTGTATACGTCTTTG
GCCCACCCAACATTCTATGAATGTCTCTCTTTCATTACATTGTTTTTGTT
CATGATTTTCAGGAAACACTGAACCCAAGGATGAAACAACTAGAAGAAAC
ACAACTTCTGATCCTCAAGAAACTAGCCAACCTTGAGAATGAGGTCAAAC
AAATGAGTTTGCAACTCGGCCATAACTATGGCGATGCTTTTCCTGTTCCC
GTCCCTTCAAGCACCACAAGAAGCTCTCAGGTAAACGTCTTATCTAGTCC
TTTTCAATCATTTAACTCTACTTTTAGTCTTACTTTTCACCAAgtacatt
tcatttttcatacaaaaacttcaacaaattattttgaagccttatgttac
AAGAACTTTAATTTCACGTAACTTTTTTACAGTCAACAGCATCAACACTG
CCAAGTGGACCTGTTCAGTTACCAGAGGGCACTCTCGATTTCGTCATCAC
CGTTTCTGCGCAAAATCCTTCCTTCTCACCACTCCTCATCGGAGAGTTAC
TTAGAAAACGAGGTAATTCTCTTTCAATTTGCTATTTGTGACCATACAAG
CGATTCAAAGGACATAAAAAATTCTTACCGGCAACTAGCCGGCTTTGTTT
TTGCCGGCAAATTGCCGGTTATCTGTTTGGTGAAGCTGGCAATGTTATAA
CAGTAGCCGGCAAATTGCCGGATGACATAGAGTAGAAAAAGTGCTGGCAA
AAActggaaactaattttctttgttattatattattttaatAAGGATACA
ATTTTAATGATATTTAAATTTCCGCTTTCTGTAGGTGTTGAAGTGGCATT
CCCCACCCATCTTCATTCGAGCTGTAAAGAGGGAAGCATCACCGCccaaa
ttttctttgttattatattattttaatAAGGATACAATTTTAATGATATT
TAAATTTCCGCTTTCTGTAGGTGTTGAAGTGGCATTCCCCACCCATCTTC
ATTCGAGCTGTAAAGAGGGAAGCATCACCGCCCAAATCTTGCAACCATAC
GGTGGAGAGTTGACCGGTCGATTGAGGACCTCCACCACTGCTAAAGTTTA
TCTTACCATCATGATCAAAGATGGTATgaggaattatttttttgtttata
cgttttttatgtcaaagggatctttttcaattttaatgagGATCATTATA
CAATAGTTAAGATACCTTACAAAAAGAACTAAAAGTGGGGAAAGTTAGGC
TACCATCATGGTGGGGTGTAAATAAGGCTAGATTTTTGTTGGTTCTAAAA
AGTTCTAGCTGGGAAATATTCTGAAGcattgactttaactctaagATTGC
TAGTTGTTTCTCGCAGCGTATTCCAAACAATACGtagttcattttttatc
tttgctACGCGGCGTTACAAATAGGTCCTGCACAGTTTTTcccaaacttt
tttccaaaaccaGCTTTCCAATGTTGTACCGATGATTGCCATTTTCATTC
TTAAGACCACCTTCCTTTAGTTTAGAGTCTTGCCACTCACAAAGTTTTTT
AATACCagaatttgttttaattttgttaaGTTCCGTTCTGCCCAAGCGTC
ATGTATTCCGCTATGCTTCAAACACGAATTATCGGAGATACCAATATCGC
CCGATTTTTAACCCGATTCTTGGTACCGGATTTGTATGACGAGAACAACA
TGGAATCGGTTTCTTCCATCGATCAAATGATGGATATGGCAAAACAGGTA
TGAAgatcttttttttggaatatattTATTGTTTTAGATCTGAAATATTT
AATACACAGATTTCCTATTAGTAGATTCATGTCAAGAactttcagccaat
cagagctaaTTAGGCGTTTTTTGTGAcctttttttacatgaatctgctaa
taggaaatttgtgtattgaaaTAACACtcctttcaatttcttttcaaaat
gacGATTTACCAAACCAACTTCAAATAGGTTTTTCTCAACTTTTGTATTC
TAGTTGGCATCATCAAGCACCAAAGTCAGAGAGGCGGCCATGAAATCCTT
AAACGCCCACTTAGGGCGTAAACAAGAATATTTATCTTGTGATCGATTCA
CTCTTGCCGACATTGCTACCCTGTCCGCCTTATTGAGCAACCGTTCCAAT
TTTAATTCGCTGCCCAAAAACGTCAAACCGTGGTTTCAACGCATCGCTTC
GAATTTcgatttgagaaatttcactTTGCCAGCTGCTTGGAGTAGCGCTT
AA Coding sequence (CDS) from alignment at sc0000376_pilon:151367..158718+ >XLOC_018371 ID=XLOC_018371|Name=XLOC_018371|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000376_pilon:151367..158718+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCAATGAAACCAGTTTACAAGACTGATGATATTGAAGTTTCTGA
TATTATGTACAAAATGAAGAGCTTACACTGTGAAGAAACTACCACAGGGT
CAAATATGTATTCAATGAAACCAGTTTACAAGACTGATGATATTGAAGTT
TCTGATATTATGTACAAAATGAAGAGCTTACACTGTGAAGAAACTACCAC
AGGGTCAAATGAAACACTGAACCCAAGGATGAAACAACTAGAAGAAACAC
AACTTCTGATCCTCAAGAAACTAGCCAACCTTGAGAATGAGGTCAAACAA
ATGAGTTTGCAACTCGGCCATAACTATGGCGATGCTTTTCCTGTTCCCGT
CCCTTCAAGCACCACAAGAAGCTCTCAGGAAACACTGAACCCAAGGATGA
AACAACTAGAAGAAACACAACTTCTGATCCTCAAGAAACTAGCCAACCTT
GAGAATGAGGTCAAACAAATGAGTTTGCAACTCGGCCATAACTATGGCGA
TGCTTTTCCTGTTCCCGTCCCTTCAAGCACCACAAGAAGCTCTCAGTCAA
CAGCATCAACACTGCCAAGTGGACCTGTTCAGTTACCAGAGGGCACTCTC
GATTTCGTCATCACCGTTTCTGCGCAAAATCCTTCCTTCTCACCACTCCT
CATCGGAGAGTTACTTAGAAAACGAGTCAACAGCATCAACACTGCCAAGT
GGACCTGTTCAGTTACCAGAGGGCACTCTCGATTTCGTCATCACCGTTTC
TGCGCAAAATCCTTCCTTCTCACCACTCCTCATCGGAGAGTTACTTAGAA
AACGAGGTGTTGAAGTGGCATTCCCCACCCATCTTCATTCGAGCTGTAAA
GAGGGAAGCATCACCGCCCAAATCTTGCAACCATACGGTGGAGAGTTGAC
CGGTCGATTGAGGACCTCCACCACTGCTAAAGTTTATCTTACCATCATGA
TCAAAGATGGTGTTGAAGTGGCATTCCCCACCCATCTTCATTCGAGCTGT
AAAGAGGGAAGCATCACCGCCCAAATCTTGCAACCATACGGTGGAGAGTT
GACCGGTCGATTGAGGACCTCCACCACTGCTAAAGTTTATCTTACCATCA
TGATCAAAGATGTTCCGTTCTGCCCAAGCGTCATGTATTCCGCTATGCTT
CAAACACGAATTATCGGAGATACCAATATCGCCCGATTTTTAACCCGATT
CTTGGTACCGGATTTGTATGACGAGAACAACATGGAATCGGTTTCTTCCA
TCGATCAAATGATGGATATGGCAAAACAGTTCCGTTCTGCCCAAGCGTCA
TGTATTCCGCTATGCTTCAAACACGAATTATCGGAGATACCAATATCGCC
CGATTTTTAACCCGATTCTTGGTACCGGATTTGTATGACGAGAACAACAT
GGAATCGGTTTCTTCCATCGATCAAATGATGGATATGGCAAAACAGTTGG
CATCATCAAGCACCAAAGTCAGAGAGGCGGCCATGAAATCCTTAAACGCC
CACTTAGGGCGTAAACAAGAATATTTATCTTGTGATCGATTCACTCTTGC
CGACATTGCTACCCTGTCCGCCTTATTGAGCAACCGTTCCAATTTTAATT
CGCTGCCCAAAAACGTCAAACCGTGGTTTCAACGCATCGCTTCGAATTTc
gatttgagaaatttcactTTGCCAGCTGCTTGGAGTAGCGCTTAATTGGC
ATCATCAAGCACCAAAGTCAGAGAGGCGGCCATGAAATCCTTAAACGCCC
ACTTAGGGCGTAAACAAGAATATTTATCTTGTGATCGATTCACTCTTGCC
GACATTGCTACCCTGTCCGCCTTATTGAGCAACCGTTCCAATTTTAATTC
GCTGCCCAAAAACGTCAAACCGTGGTTTCAACGCATCGCTTCGAATTTcg
atttgagaaatttcactTTGCCAGCTGCTTGGAGTAGCGCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000376_pilon | genome | sc0000376_pilon:151367..158718 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-972:7104 |
| Aaloc | 559-723:6683 |
| Aaloc | 406-555:6073 |
| Aaloc | 274-402:5533 |
| Aaloc | 106-273:5213 |
| Aaloc | 1-105:1 |
|
