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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000023_pilon:182173..186287+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018212 ID=XLOC_018212|Name=XLOC_018212|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4115bp|location=Sequence derived from alignment at sc0000023_pilon:182173..186287+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAACAATAATGAATATCACAGAATTTGGCTCCAAGGTGCTAGATGATAT
TGACCAAGCTATTAACAGCGGAAAAATTGACTATGAATGGATTATTTATA
AATTAGACACTTTTGAAAGACTTTTGTCTACTGCTGTTAATCTTTATCCC
ATTTGTGAGGAGGCAATAAACCAAATTGCTTCAATATTGAACCACTTGCA
AAGACTCAGTGACCAGCAGCAAAATGAACAATCAGAAATTCTGTTGACCT
TAGATCATATAGGTGGGCGTGGACGACCGAGACTTTTGATTGATATTGAA
AAACTGCATTATTTGTTATCTTTGAACTTCACAGCAAACgatattgcaaa
tttttttgGCACTAGTAGGTGTGTTCTAGGGGTAAACTAATCAAAAAAGG
TGTACaataatttttgactttttgaattgaattttcattttactttttga
ctttttgatttgatttttactttttattgactttttttgatttttttaaa
acgtgTACAAGAATTTGTATACCAAGAGTATGGTATGTTAAATGGAAGAG
TATACGGGGTAAAACCCTTTCCATCTAAGTATTCAGGCtttaataccggg
tgcgccacaaaaaggtttctctttttaaagtgaattttctcgaggtCTAG
AAATCTAGAAATAGCCAATCCTTTTCCATTGGatagaagaaagataaact
tgatgggtcatttataaaatttggttcattagttcaaaagttatgctcaa
tttaATAAAAcagttactttcagaaaatgctcaaaaacgttaaaaagcat
aattacatgatacatcagtattttcgtttcagtcattaaaaatgataatt
agctgtctaaatgaccttttgttatataaaggaaggttgaatttcaatga
aaggaagaaaattcgtcgaaaaaggcagaaaaatctggtaaaattcataa
aaatacatcaaatatgggtttcgaggtggATCCAGttcttacatagactt
tatccagtctagaaccaaatatctgaggaaaatttcggtaaataaaagta
aattaaattaattttgatgaagattttaaaccctttcgacccttccattt
caaaattaatgtgtttagttactgaaaaatgctcttaatcatgtaaaggc
tattgcgattgccaaaaTTAACATAATAATTTGATAGGTaaaattttaac
gttttcgagcactttctgaaagtaacttctttattcaattaagcataact
tttgatctaatgaatcaaatttaataaatgacccatcaaaatttaagtat
gtctttcttttttccaatgaaataaaaatgattcttttaaaaattttaga
tttcgagaaaattagttccaaagagagaaacttttttgtggcgcacccgg
tagaacactatttttttatttctgtaaCAAAGCAtacacaatagaccttt
tcgcctttgcgtccgccatattgaattgtatgcaaaaatacaggaacgaa
aatgccgtggttggatttagttggaatgtatgcaaaacatatgcaagttt
acacaaagattaaaaagacaacaaagcatcttataaataaatattataat
cattagaacaataaacaATGGAAtgtcttaatccaaaaggaaatatttac
agaacaacaaaagccttttaggaatttgttcttaaagacattgcatattc
tgttttcatgccattaagaaattccacgaagacggagtacacacatcaaa
ctttcaaaacacgcaaactgaaagcagtaattatgacgtcacactttctc
aatgttttgatttgatcatttggcggctctattcccaggagaataatttg
ccgtcagccgaataaggattgttttttaccttcacgggtgatttttcagt
ttgagattctgtctaatgttatggtcttttgaagtgcttgttctaagaga
tgagtgaatataattgtttttagttttcaagagaagcaaatttaatcttt
cttctacaagattacactttaatataatgccaattatgcatgtaagcttt
tatttaatactttctttttgcatatgttttgcatactttctaagggaatt
tcaccacggcaattcggcaaccataatttttgcatacaattcaatatggc
ggacgcaaaggcgaaaaggtctataggaatattttgttgatttcatcTTT
TGATATGCTTTCTATTtctcattcattcattcttttaGAAGTACAATCTG
CAGGAGATTATCAGACCAATCCATTTCAATTAAGAATACCTACTCCAAAA
TGCCAGATTATGAATTAGACGAGTCAGTGAAAACTATTCTTGACGAATTT
CCTAGAACTGGATACCGTAGAATGAAGGGTTTTCTGCAATCTAAAGGACA
CAGGGTACAAGAGAAAAGAGTGCAAGCATCTATGCATCGAGTTGGTTTGG
AAGGAGTATTAAGTCGGTGAGAGTGTTTACTGTATACCATACacgccttt
tttataaggaacacgtttataaggaactttgaaggttgaaaatggtccaa
aaaataaggaattgttaaggaactggtcaggctgagaataagaaaaccaG
TTAAGAAACAGTGAGGTAAACTTGAGTTTGCACACATTTACAAAAGCCTA
ATCAAGAAGATaacaaaatattgacaaaacaacattcaataaacgtcttt
ttttgcattttagtcCATTGTTATACTTATACATAAGTTACATACTTAGC
AAATGCAATCTTGTCATctaagtaaataaggaactcgataaggagcTCCA
GGCTCGGGGCCAAGtcaaggttccttataaaaaacgtgtaggtatATGAA
AAAAGCATATGAGATACCTTAATTTTAATTAAGAAAGTTTGACTGGGAAA
AACTTATGGGGATTTAGTCATAATCAACCAAATTATGTTACCAcctattt
attttttcgccATCTGCAAAATTGAACTCCAAATTTACTTTATCTCATAT
ATATTGTATTCTCCAAATTTCTAATTACCCACCTCCAATGACAGGTTTTT
TGccttttaaagggacattaaagtagtaaaatgtaaacattgcgcgaacc
acgtgtcattaaagagaacaattaaaatcatgtgtccaaaacaaacttgt
aaaacaattgaacgatcaaaattagccatatttggtttgattttttattt
tgacatgtgacatttgttttgattttgtatccgctgcatacagtttgttt
acaaatatcGCAactactgttatgtccctttaaatgaCGATTTTTAGCAA
TACATACAACCGCCAACTTAAGTAAGTTTAAGTTCCTACAAAAATCTCTC
TTCCGTTCCCtcaatattttcttaaaatttatcAATTCATCATTCATTGC
TGGCATCACATGATGTTCAATTCCGGCTTTTATTGGATGTTTGAGGGAAA
TATTTATTTAGTTGATGAATaatcagatgattttttatatCTGGGGCCTT
GTTAAAGATACCTCATATGTTTCTAtgttcacaatttttttgatccaatt
attttatttttttacagctagtttttcatgagataattttttactttCAG
GTCAACTGAGTTAAAAACAGTCCGGAGAAGAAAATACAACGTCCGCGGTA
CAAATGCGTTGTGGCATATCGATGGTAACCACAAGCTTATTAAgtaagtt
ttttgaatttttcatctgTCCTCGTCAATTTAAGCAACTTTTCGATGCCT
TTAAGATTAATACAAGCTTGttgtgtaaaaaaaaaagaaaaatatcgaTA
TTGTGTGACAAATTATATTGACATGAGCAAATCTTTCTTGAATTATTATA
CTGTATTAATTGAAAATCCATTGTTATAGAATAAACAACCGCAAGGTCTT
CGGTCTTGATAGGCTCatattttcaagtttgttttttttactctaGATGG
GGATTGGTTATCCATGGAGGAATCGACGGATTTTCAAGAAGGATTGTTTA
TTTAAATTGTTCCTCAAATAACAAAGCGTCTACTGTCGCTTCATTATTTG
AACGTGCAGTTGGTACCTATGGTTTGCCAAGCAGAGTTCGAGCTGACATG
GGAAGTGAAAATGTT Coding sequence (CDS) from alignment at sc0000023_pilon:182173..186287+ >XLOC_018212 ID=XLOC_018212|Name=XLOC_018212|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1716bp|location=Sequence derived from alignment at sc0000023_pilon:182173..186287+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAACAATAATGAATATCACAGAATTTGGCTCCAAGGTGCTAGATGATAT
TGACCAAGCTATTAACAGCGGAAAAATTGACTATGAATGGATTATTTATA
AATTAGACACTTTTGAAAGACTTTTGTCTACTGCTGTTAATCTTTATCCC
ATTTGTGAGGAGGCAATAAACCAAATTGCTTCAATATTGAACCACTTGCA
AAGACTCAGTGACCAGCAGCAAAATGAACAATCAGAAATTCTGTTGACCT
TAGATCATATAGGTGGGCGTGGACGACCGAGACTTTTGATTGATATTGAA
AAACTGCATTATTTGTTATCTTTGAACTTCACAGCAAACgatattgcaaa
tttttttgGCACTAGTAGGAAACAATAATGAATATCACAGAATTTGGCTC
CAAGGTGCTAGATGATATTGACCAAGCTATTAACAGCGGAAAAATTGACT
ATGAATGGATTATTTATAAATTAGACACTTTTGAAAGACTTTTGTCTACT
GCTGTTAATCTTTATCCCATTTGTGAGGAGGCAATAAACCAAATTGCTTC
AATATTGAACCACTTGCAAAGACTCAGTGACCAGCAGCAAAATGAACAAT
CAGAAATTCTGTTGACCTTAGATCATATAGGTGGGCGTGGACGACCGAGA
CTTTTGATTGATATTGAAAAACTGCATTATTTGTTATCTTTGAACTTCAC
AGCAAACgatattgcaaatttttttgGCACTAGTAGAAGTACAATCTGCA
GGAGATTATCAGACCAATCCATTTCAATTAAGAATACCTACTCCAAAATG
CCAGATTATGAATTAGACGAGTCAGTGAAAACTATTCTTGACGAATTTCC
TAGAACTGGATACCGTAGAATGAAGGGTTTTCTGCAATCTAAAGGACACA
GGGTACAAGAGAAAAGAGTGCAAGCATCTATGCATCGAGTTGGTTTGGAA
GGAGTATTAAGTCGAAGTACAATCTGCAGGAGATTATCAGACCAATCCAT
TTCAATTAAGAATACCTACTCCAAAATGCCAGATTATGAATTAGACGAGT
CAGTGAAAACTATTCTTGACGAATTTCCTAGAACTGGATACCGTAGAATG
AAGGGTTTTCTGCAATCTAAAGGACACAGGGTACAAGAGAAAAGAGTGCA
AGCATCTATGCATCGAGTTGGTTTGGAAGGAGTATTAAGTCGGTCAACTG
AGTTAAAAACAGTCCGGAGAAGAAAATACAACGTCCGCGGTACAAATGCG
TTGTGGCATATCGATGGTAACCACAAGCTTATTAAGTCAACTGAGTTAAA
AACAGTCCGGAGAAGAAAATACAACGTCCGCGGTACAAATGCGTTGTGGC
ATATCGATGGTAACCACAAGCTTATTAAATGGGGATTGGTTATCCATGGA
GGAATCGACGGATTTTCAAGAAGGATTGTTTATTTAAATTGTTCCTCAAA
TAACAAAGCGTCTACTGTCGCTTCATTATTTGAACGTGCAGTTGGTACCT
ATGGTTTGCCAAGCAGAGTTCGAGCTGACATGGGAAGTGAAAATGTTATG
GGGATTGGTTATCCATGGAGGAATCGACGGATTTTCAAGAAGGATTGTTT
ATTTAAATTGTTCCTCAAATAACAAAGCGTCTACTGTCGCTTCATTATTT
GAACGTGCAGTTGGTACCTATGGTTTGCCAAGCAGAGTTCGAGCTGACAT
GGGAAGTGAAAATGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023_pilon | genome | sc0000023_pilon:182173..186287 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-867:3948 |
| Aaloc | 607-696:3602 |
| Aaloc | 379-603:2240 |
| Aaloc | 10-375:1 |
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