XLOC_018209 (mRNA) -

Overview
NameXLOC_018209
Unique NameXLOC_018209
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000023_pilon:195449..197009-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018209 ID=XLOC_018209|Name=XLOC_018209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1561bp|location=Sequence derived from alignment at sc0000023_pilon:195449..197009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCAACCATCGATGTAAATAAAATTTTTCTTTTAAACATACATGTT AAAGCTCTAGTCTAATTTGTGGACGTATTCAAAACCAAAATGTATGGTTC GTTGTATTTTAAGGAAGACAAACCCGTTTTTTAGTCATAGTGGATGACGA ACGATGCATAGTCAAATGACAATTGAACCAGTTGAACAACAATTGAACCA ATCGAATATTACCTAGAATTTTGACGTTCCATTGAGATTCAATTGCGTTA GACAATCGAATTTCAATCGGTCGATTGCGTTCGATTTGGTTCGATTGGTT CGATCGTCAAATGAGATTGTCTGGGCATCATGAAGATTTGGTCACTCGTC ATGGAACCCATACTACTTTTTCCTTTTACTTTTTTTATTCAGGAATGTTT ATCAGCCAAATCAAGGTGGCCCGCCACCAAAAAAAGCATTCACGCCCAAG AAAACGTGGACATGTACTTTTTTTTGTCTATCAGAAAGAAACGCAACACA TACACCATCTTCTTCTCAGTATTTCCAATATGGTAATGCTGGACTTGGAA AGAAGAGGATTCAATTTTCCAACACAGCAAGTCACCTAGACCTCCGTCTC ATGCTTGAGGAAGAATTCCCTAAATTAGCAACATTAGGTGGTCGCTTCAT GTTATACAAGGCTGTTGGTGATAGGAGTGGCAAGCGGCCACTTCAAAGAA TTGAACTGGGCCCTTGTGGGTATTCTGTGCCCTATTTAAGGAATAACTGC AATGTGTCCCACTGTACTATATATGTTGTATCCATTCAAAGTTCACTTGA TATAGCAGAAGTAGTGAAGGTAAGTAACTTTTCTTCTTGGGCCAAAATAA AAAATGTCTTGTTTCCAAGAAATCGGCCTGGTGAACTTTTTTTTGAAGAG TCACTCGGCTGCAAATAATTTTTTTTTTATGTTGCCGAAAGAAACTATTT TCTCTCAAACTGAATATTTCAGACAAGAAAGCTAAAAAAAGCTAAACGTT TTTTAAAGAAAGCACGATAAAAGTTTTGTAGCAGAGTAAATACTGTACAG CAAAGACAACAAACGTTCCTACCAAACAAAACACACATAAGGTTTGTATT TCTGCTTAAAAGAAAAAAATATTTGTCACCCGCATTTCCGGAAACAAGAC TATTTTCTTTTTCTTACTTTGCATTCATTGCATTGTTAGGAAAGGGTTCA CTACCCCCCCAGTCTAGATCAACACCCTACCCAACCCTAGGTTAAACCCT CTTTCAAAATTTTATCCAATCCCACTCAAAAATGAGACATCCCACTTTCA GGGCATTATTCACTACCCATATGAAATAAAATGATAGCATGAATGAGGTG CATTGCAGTATATCCCTTAACCTTAAAAAGTAAAAAAGTTTTAGGGTTTT AACCCAGTCCAAGACCGTAAAACTAGAGATTTAGAAAGATGGGCTCAAAT AACTTTATTTCTCATTTTTTATTAAAATTGTTTTCTTTTTTCCAGCCTTC TTACAATTCACCAACAATTGATTGCCATTTTTGTGGTGACATAATTGAAT TAGCACTCTTA

Coding sequence (CDS) from alignment at sc0000023_pilon:195449..197009-

>XLOC_018209 ID=XLOC_018209|Name=XLOC_018209|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1020bp|location=Sequence derived from alignment at sc0000023_pilon:195449..197009- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGCAACCATCGATATGTTGCAACCATCGATGAATGTTTATCAGCCA
AATCAAGGTGGCCCGCCACCAAAAAAAGCATTCACGCCCAAGAAAACGTG
GACATGTACTTTTTTTTGTCTATCAGAAAGAAACGCAACACATACACCAT
CTTCTTCTCAGTATTTCCAATATGGTAATGCTGGACTTGGAAAGAAGAGG
ATTCAATTTTCCAACACAGCAAGTCACCTAGACCTCCGTCTCATGCTTGA
GGAAGAATTCCCTAAATTAGCAACATTAGGTGGTCGCTTCATGTTATACA
AGGCTGTTGGTGATAGGAGTGGCAAGCGGCCACTTCAAAGAATTGAACTG
GGCCCTTGTGGGTATTCTGTGCCCTATTTAAGGAATAACTGCAATGTGTC
CCACTGTACTATATATGTTGTATCCATTCAAAGTTCACTTGATATAGCAG
AAGTAGTGAAGGAATGTTTATCAGCCAAATCAAGGTGGCCCGCCACCAAA
AAAAGCATTCACGCCCAAGAAAACGTGGACATGTACTTTTTTTTGTCTAT
CAGAAAGAAACGCAACACATACACCATCTTCTTCTCAGTATTTCCAATAT
GGTAATGCTGGACTTGGAAAGAAGAGGATTCAATTTTCCAACACAGCAAG
TCACCTAGACCTCCGTCTCATGCTTGAGGAAGAATTCCCTAAATTAGCAA
CATTAGGTGGTCGCTTCATGTTATACAAGGCTGTTGGTGATAGGAGTGGC
AAGCGGCCACTTCAAAGAATTGAACTGGGCCCTTGTGGGTATTCTGTGCC
CTATTTAAGGAATAACTGCAATGTGTCCCACTGTACTATATATGTTGTAT
CCATTCAAAGTTCACTTGATATAGCAGAAGTAGTGAAGCCTTCTTACAAT
TCACCAACAATTGATTGCCATTTTTGTGGTGACATAATTGAATTAGCACT
CTTACCTTCTTACAATTCACCAACAATTGATTGCCATTTTTGTGGTGACA
TAATTGAATTAGCACTCTTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018209XLOC_018209-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023_pilongenomesc0000023_pilon:195449..197009 -
Properties
Property NameValue
Aaloc445-510:67
Aaloc19-444:1169
Aaloc1-15:1562