XLOC_018167 (mRNA) -

Overview
NameXLOC_018167
Unique NameXLOC_018167
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000019_pilon:2410657..2412687-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018167 ID=XLOC_018167|Name=XLOC_018167|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2031bp|location=Sequence derived from alignment at sc0000019_pilon:2410657..2412687- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGAATGGCCTCGTTTATTGAAAGCCACAATGAAACCAGTTTGGTTGAG AATTGATTTTGATCGATGGAAGATTGATGATTCTGAAGATGAGAAACAAA CGGCCGAGGATGAAGATGTTGAACAACAACTCAAGGTGCGTTGCCCGTGG GGTCACTTTTACCTAATTTGGTACTTTAATCTGACAAATTTTTGCCGTTT TTGCGAAAATCAATCTTGCGAAATCACGTGCGATTGATGACTCGCAAAAT TAAATCTAAAAATTAATTTTCTAAACCGTTGATTCGCGAAAATGAATAAA GAAAATGTCGCAATTTTTTGGATCGCGAAATCAAATTGCGCGAAAATTAA TTCGATTAAAGCAGATAAAAGTAAAAAATATCTTGGATTACTGAATTTCT GCTTCTGCTTTTCCATATTTTGTTCAAAATTGGTACGATTTAGTGAAGTT ATACCTAATAAAACACTGAATTTTTATCTTTTTCTTTAGAAAATATCTTT CGAAACGAGGATTAAAAGTGAAGTAGAAAAAGCACAAGAAGATAGTAAGT TCGGAGATAAATGTATATTGTTTAAAGTTGACTAGGCTTTACAATGTATG AAATATCAGAAATAAATGTCTTTTGGAGTTTGATTTTTTAAGTTTTCATT TTTTGTTAATATGATTGAATACGACTAGAACATCTAGCGTAGAGCTGTTT GACATACACTGGCTCACTTCCAAAGAAGCTTCAATAATTCTTTGAATGTT TTTATTGTTTATTATCATTATAGTTAAAATTTGGACAAAGTTGGCATGGT TGACGGTGTATAACTGTGTTCAATTCGCGTGTTTTGCTGTCATTTTTTCC AAATTGATGATCTGTCTATGGAAACATAAATATGGTAGGACCTGTGATTA TAATTTGAAGCCATTTTTCAAAAGTTTAAATCTTAAAAACAACAAGCGAT ATATTTCGGTGTTATAACTACTTTCCAGTTTGAAATACAAGTGTTCTGTA AGACTTTCAAACACTTTTGGAACACTTATAGTAGGAAGAAAATCCAGTTT CAAAAGTCAAATTTAAGTTTTAAAGTCACCGTAAAAATCTTTTCTATTAT GAGCCTTCACCCATTTTATGACTTTTTCATTTTGGCTAATTAGAATCTCA GAGATTGTCCAAATCGTATTTAAATTTGAGAATCAACCTGTCATCTCGCA TTTAAGAGTACCGAATCGTGCCCATCTCTACAATAGCTAGGCGCAATCCA AATCGCTGACCAATAGACGAGCATGAGAATGTGTTATCTTTTTGAAAGAA TCTTTTTCTTTATTTATTTAGATGCTCCATTATATTTCTATAATGAAGTG ATCGACTTGTTTTTGACATGTCAATTAGCAGCGTTTATTGAGATCATTAA CCCACTTGTTGGGATTGTTAAAACTGGTCTACAAGCTCCCTTCATGCAGG TATTAACACTTTGCTAGATTGTAATGCAAAATTTCGAAAATATATTTTAG TGTTTCTTTATTACTCGAATTCTAATAAGGTTGAAGGAAAACTACTTGAT TTCAACGCATAAAATTACTTCATAGGATAAATTTCGCAGAAATCGAATTT GATAATTCGGCGTGGCGGCAAAATTTTAAGATTTCGTAAGGACTTTAAAT TCGTGGATAACAATAAGGGGAGTTCAAATTTTCGATTTCTTTAGTTTTTA CTGCCAAACAGTGTAAGTTGGTTATTGAAGTGCATACGTAAACTTGTACA CGTTTTTTTATACGAACAAACTAAGAGCACAAGGCTTCAATGGCCAAAAT ATTACGACGCTTCATGCTTCTATAATCAACCATTAATTAATTACAATATT TCCCTAGTTTTCCTTCATTAATAGATATTTTTTTATCTAGGTATTTGGTC GGAATTTCATCTTGTTCGTTTTATTGATGCCCGAGAAGAGGTTCCATCAA GACTCCGTGGTCTTCGTATTATTCATTGTCTGGTCCTTCATCGAAATCAT AAGGTATCTGTTTTCTTTTTATCACTTTTGA

Coding sequence (CDS) from alignment at sc0000019_pilon:2410657..2412687-

>XLOC_018167 ID=XLOC_018167|Name=XLOC_018167|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1140bp|location=Sequence derived from alignment at sc0000019_pilon:2410657..2412687- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGAATGGCCTCGTTTATTGAAAGCCACAATGAAACCAGTTTGGTTGAG
AATTGATTTTGATCGATGGAAGATTGATGATTCTGAAGATGAGAAACAAA
CGGCCGAGGATGAAGATGTTGAACAACAACTCAAGGAAGAATGGCCTCGT
TTATTGAAAGCCACAATGAAACCAGTTTGGTTGAGAATTGATTTTGATCG
ATGGAAGATTGATGATTCTGAAGATGAGAAACAAACGGCCGAGGATGAAG
ATGTTGAACAACAACTCAAGAAAATATCTTTCGAAACGAGGATTAAAAGT
GAAGTAGAAAAAGCACAAGAAGATAAAAATATCTTTCGAAACGAGGATTA
AAAGTGAAGTAGAAAAAGCACAAGAAGATATTAAAATTTGGACAAAGTTG
GCATGGTTGACGGTGTATAACTGTGTTCAATTCGCGTGTTTTGCTGTCAT
TTTTTCCAAATTGATGATCTGTCTATGGAAACATAAATATGTTAAAATTT
GGACAAAGTTGGCATGGTTGACGGTGTATAACTGTGTTCAATTCGCGTGT
TTTGCTGTCATTTTTTCCAAATTGATGATCTGTCTATGGAAACATAAATA
TGATGCTCCATTATATTTCTATAATGAAGTGATCGACTTGTTTTTGACAT
GTCAATTAGCAGCGTTTATTGAGATCATTAACCCACTTGTTGGGATTGTT
AAAACTGGTCTACAAGCTCCCTTCATGCAGATGCTCCATTATATTTCTAT
AATGAAGTGATCGACTTGTTTTTGACATGTCAATTAGCAGCGTTTATTGA
GATCATTAACCCACTTGTTGGGATTGTTAAAACTGGTCTACAAGCTCCCT
TCATGCAGGTATTTGGTCGGAATTTCATCTTGTTCGTTTTATTGATGCCC
GAGAAGAGGTTCCATCAAGACTCCGTGGTCTTCGTATTATTCATTGTCTG
GTCCTTCATCGAAATCATAAGGTATCTGTTTTCTTTTTATCACTTTTGAG
TATTTGGTCGGAATTTCATCTTGTTCGTTTTATTGATGCCCGAGAAGAGG
TTCCATCAAGACTCCGTGGTCTTCGTATTATTCATTGTCTGGTCCTTCAT
CGAAATCATAAGGTATCTGTTTTCTTTTTATCACTTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018167XLOC_018167-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019_pilongenomesc0000019_pilon:2410657..2412687 -
Properties
Property NameValue
Aaloc430-570:142
Aaloc304-429:709
Aaloc193-300:1257
Aaloc136-189:1543
Aaloc1-135:2032