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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000402_pilon:15643..20409+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018097 ID=XLOC_018097|Name=XLOC_018097|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4767bp|location=Sequence derived from alignment at sc0000402_pilon:15643..20409+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAGGTGTTTGTATGGGGACGAGGCTCTCATGGTAAGATTATCACATA
TTTCAATaaatattctgttttttttttccaaggTCAGTGATATAGTCCTA
CAGTACTGAGAtagaaaaaatcgcaaaatagaaattttcctccttgtttt
gaattttctgattggcTGATCCACTCCGTTTCGAGAAAGCTGATTGGCTG
TTTTGGCtaagtcaaaaaaattgatcTAATTGGCTTGCTTATACTTTTAA
ACGACCGGGCCCTGGGACTTTCTTCATCAGGAATCTCAATCTGGGCTTTT
GTAATTTCAATATGGATTAGAGAAATAGCACCTTACAATTACAATTTTTT
GAATCGCAAAACTTAATGGTTTGAGCTCTCTAGCGACAACTTCAGTTCAT
TTTGTATAAAGCTACAAgagcatgaaactgccagtagcagaataaaaaaa
gtgtctttCCTTCCTTCCTTACTGACATCGCTCTTCATATGTATGGAGca
ttataaaaaactaaaaactactTACAatgtaatacacgtttttctttaag
aaactagttttaccaagcagcctcaatatTTCTTAagaatcggccttttg
agccttaaatgtttcttacatgtttccaaactttttgacataatcagcat
tctgagcctcatgtttcttaaaagtgtgtttcttaaaaaaaaaaacgtgt
atcctcTCATCTTTCTACTGGGTTcagttgttaaactttttcttttgtaa
tgGTAGTTTTTGGCCTTCATTAACAGCTTTCTTCATATTCCCAGGTAACT
TTGGCTTGAACGACCGTCACAATAGATGTAATCCAACCAATGTCCCGTTG
CCCATGGATACGAAGCCTCGATCCGTTGTCTGTGGAACAGATTGCTCTTT
CATTATTACTGATAAAGGGGCTGTCTATGCTTGTGGAAACAATAGGTGGG
TTTGAtataggctgcacgcatcccctctgatatgttttgatatagtgGGT
GCGTGCGTATCCTGTATAtaaaattctcgtccgagagtttCCCCAGATTt
tgtgttttagagttttagaaacatgattagcttgattagtaagtGAATAT
GAAAGATCTttagatttcattaaatttaaattaaaaattcgaATGGTTAg
aggttaatacaatcattggatttctgaAGCTTTTGAATTGAAACAGGTAA
CTCTGGGACAGGAATTTTGAACacacatcccctatatcaaaatcaattct
ggGGAAGCACGCAGTCTAGGTTTGGTAATACTTTCTTTACTTTCTttact
ttcttttcaaaaatttgttcaaagtGTACCTTAAAATGGCATATACTAGC
CTAACGCTTaagaattaattttgaaaattttgggtgGATTTAGTTTTGCC
ATtcagcagggggggggggggtcggtagtaaaatctcagacataatgacg
tttactacggtggtggtgtgacgaaaaatcgaaaaaaacttttactaccc
agTGTAGTTAAATACTTAAAtaggtggtatctatgtgttaaatgttgaaa
aaattttactacctgggtagttaaactggtaaaattagcaaattttagct
atatTATTGTAATTCTCTCaattttttggaagacttttccgaaaaaatct
aaaaaattttataatttgaaaaaattttctgttggaaagttgtttgctgc
aaacaaaaaatcctcgaaattttttgtcaatataaaaaagaatttgattc
taagggcaaaacatttttgcactaagtgacaaatgtgtcacagaaataat
cattttttagctttttttgtaaaatcagtcctaaaagcaaccaaaaagta
ggtggtctccatgacaaattgtcccaaaaacttttactaccagggtagta
aaatacctcttccaagagtctgggtggtggtatgtaaagattcgtaaaaa
tccttttactactcatatatgtctgagattttactaccggacctcccccc
ctggattcagCAATCTCACGCGATTGGgcgagttttttttttatcacgAA
AATGGCAAGAATAAAGCTTTTCATGAATAACGTCAaaagcaacgcttacc
tcgttctcaaaatattgctatgatAATTGATTCCCAAAGGAGTTCAACTT
GTTATGCTTCATTTATGTAAAGTAACGCTTGAACCTTGGAAATGGTTTCA
AACGAagcagtcgttgcactcaaaataatttatgaaaaggcctattcgcg
aaattaaatatcACGACAATTTATCTGATTCCAATATTCTTCTTTCTCCT
CAGAAACAACAAGCTTGCATTACTCACAGACAATGAATTGAAGAAaggca
atttttcaaaagtggaaAATGATTGCCTCGTTTTCAAGAAGATCACATGT
CACCCCATATGTGAGCATCGCATTATTTCCATAGCAACCGGTCCAACGCA
TTCTTGTTTCTTGACTGGTAAGTTTGCTgtgattttcaatgatttttatt
gatttgGTTTTACCTGACGTTTATTCGGCCTAAGATTTTGACGTTTTATA
ACGTCTCACAAAATATAGTAATACCAGGGCCAAAAAGTTATTTTGTAAAA
CGGTAATACggtactctcaggtacctaataaacgtGCCCCaacgcttatt
aatttttcgaaaattttccaacccccacggaccttattaggaccccaacg
tttattaaaattcagaaatttcttATCAAGTATTTTTTAGATAGACTGCT
AGATTCATGGTATACAGTACTGTACTTATTTTACGAGGGCTTGTTACAGT
AATTTTTACCAGTTATTGTATCGTCAAAAATATGCTACGTTGGAAATATA
TTCTACACGAAGTCCACCGAAAGAATTTTTCACttattaaactttttaaa
aatctttttcactgCCCTCTTACCTTTCAAGAGTGACAATATTTTGAGTT
CATGTTTTTTGTAGTTCACTTGCAATGacgtgaaattttgattttctctt
tGTTTATTACAGAATCAGGACTTCTAATCACTTGTGGTGCAAACTCAAGC
TACCAGTTGGGTTACGAGAGGCAAGAAAATGATTTACGACCAGGAATTGT
TGAATTATCGAGACAAAATCCGATACATTTGATGGATTGCGGTGACCTAC
ATACCGTGGTTGTCACCTCTGGTAAGACATTGTCTTTATTTAAgtgtaca
ctcttttttttgatGCCACGTGGAAACCTCTCTCCAGGGACATTGACTTT
CGGGGCAtcaatagcgagattatgtatctggaattctctacgaaTTGGTT
AAAGCGGCGAGGGAAATCGATGTTTGACGTGTGGCATtatatcgactttg
cttatacggtgttttggtgttttttccgtacagagcaaagtagacaacga
catgtcgcctttggtgacgacccgcatgggcagccccgcaacggtagccg
tagaatatctccgatacataatctcgctaatgtAGTACGTACGTAGTGAA
GGTGGATGAGGTAGGTTTAGCAAAATCGTTTATCGTTTAAATGACTGCCA
atgtctacccaaaggtaggcgAGGGTTCACTGGATTGCTTGACTTACCCT
TGATGCATTAAGAAGAGAAGAATAAGTGCAAAGTCTATGGTATGACCCCA
CCGAGGATTAAACCAACAACCTTGAACACCGTAGCCGAGGTCTTTACCTT
TGTACTACGATCGCTTAAATACTACAGTGATATTTAAGGAATAACGTTAT
TGACTTAGAGTGAAAAGCAACATTGTTCTTTAGAGTGTTAAAGTGCTAAG
TGCATGCATTTTTGTTTGAGCTGATTATATCATGAGATATAATCTGCAGT
ACTTATGTTTGATATTCATtatatttgcatttttttagACGATCAGATCT
ATAGTTTTGGTAGTAGCCGCCACGGGCGTTTAGGGCGCCGAACAGATGAA
GACTATACTTGGAAACCACAGCtgattgaaattgaagaaaatgacgtcac
aatacAATCACTTTCAGTTTCGCATCGAACGACGCTGTTGGCTGGAAAAG
GTACGATTATAACTTGGATTaaaaaaaTGAgcccacttatttcccatcca
taATACATGGCGGCATGCATGGTTTTAACCCGAATTACAGATTGGAAATA
AAATATATCGCTAGATAAAATAGCcgcatgaaaacaaaaaagggcTAGAT
TCCATCCACCATTCTAAATACGTttcaaaactcaaaactttttgtttttt
cttgcttgGGTTGAAGATTTCGCTCTAGACCGTGGTCTATAATTCTTTCC
TGGTCTCTTATTGCACACCATTTTAACAGTAGGAACagattatttaaaaa
cattaaagtAAAAGTGGTATAAAATCTAGTCTGATTTAGTCACACATATA
CTTTCTACATTACATGGAAGCTTTCTTTTATACTTCCCATATAGAAATtt
agaaagaaatattttcgtGGAAGCCCTTTGAATTATCTGTTAGTGgtaca
aagatttttgaaagttaAAGTTATTACATTAcacaggaaattttttttga
ttaacTAGGCTATGGCAATGTGtatttccagatctggaaatctAGATTTT
TCCTAACCAATCCCTAGCTAGGGAGGGTGCAACAGCTCTCTAGTTAGTTA
TGTAAAGTAGTTTTGCCTCAGTTTGctaataagaaaatttgaaaattcat
gtggttgaaattattttactttttttcagttCACAACGCTTCAACATTGA
CTCCGATGAACTATTAA Coding sequence (CDS) from alignment at sc0000402_pilon:15643..20409+ >XLOC_018097 ID=XLOC_018097|Name=XLOC_018097|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1416bp|location=Sequence derived from alignment at sc0000402_pilon:15643..20409+ (Clytia hemisphaerica_ch_hm2_pilon)
CAACAGGTGTTTGTATGGGGACGAGGCTCTCATGCAACAGGTGTTTGTAT
GGGGACGAGGCTCTCATGGTAACTTTGGCTTGAACGACCGTCACAATAGA
TGTAATCCAACCAATGTCCCGTTGCCCATGGATACGAAGCCTCGATCCGT
TGTCTGTGGAACAGATTGCTCTTTCATTATTACTGATAAAGGGGCTGTCT
ATGCTTGTGGAAACAATAGGTAACTTTGGCTTGAACGACCGTCACAATAG
ATGTAATCCAACCAATGTCCCGTTGCCCATGGATACGAAGCCTCGATCCG
TTGTCTGTGGAACAGATTGCTCTTTCATTATTACTGATAAAGGGGCTGTC
TATGCTTGTGGAAACAATAGAAACAACAAGCTTGCATTACTCACAGACAA
TGAATTGAAGAAaggcaatttttcaaaagtggaaAATGATTGCCTCGTTT
TCAAGAAGATCACATGTCACCCCATATGTGAGCATCGCATTATTTCCATA
GCAACCGGTCCAACGCATTCTTGTTTCTTGACTGAAACAACAAGCTTGCA
TTACTCACAGACAATGAATTGAAGAAaggcaatttttcaaaagtggaaAA
TGATTGCCTCGTTTTCAAGAAGATCACATGTCACCCCATATGTGAGCATC
GCATTATTTCCATAGCAACCGGTCCAACGCATTCTTGTTTCTTGACTGAA
TCAGGACTTCTAATCACTTGTGGTGCAAACTCAAGCTACCAGTTGGGTTA
CGAGAGGCAAGAAAATGATTTACGACCAGGAATTGTTGAATTATCGAGAC
AAAATCCGATACATTTGATGGATTGCGGTGACCTACATACCGTGGTTGTC
ACCTCTGAATCAGGACTTCTAATCACTTGTGGTGCAAACTCAAGCTACCA
GTTGGGTTACGAGAGGCAAGAAAATGATTTACGACCAGGAATTGTTGAAT
TATCGAGACAAAATCCGATACATTTGATGGATTGCGGTGACCTACATACC
GTGGTTGTCACCTCTGACGATCAGATCTATAGTTTTGGTAGTAGCCGCCA
CGGGCGTTTAGGGCGCCGAACAGATGAAGACTATACTTGGAAACCACAGC
tgattgaaattgaagaaaatgacgtcacaatacAATCACTTTCAGTTTCG
CATCGAACGACGCTGTTGGCTGGAAAAGACGATCAGATCTATAGTTTTGG
TAGTAGCCGCCACGGGCGTTTAGGGCGCCGAACAGATGAAGACTATACTT
GGAAACCACAGCtgattgaaattgaagaaaatgacgtcacaatacAATCA
CTTTCAGTTTCGCATCGAACGACGCTGTTGGCTGGAAAAGttCACAACGC
TTCAACATTGACTCCGATGAACTATTAAttCACAACGCTTCAACATTGAC
TCCGATGAACTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000402_pilon | genome | sc0000402_pilon:15643..20409 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 673-708:4732 |
| Aaloc | 511-669:3891 |
| Aaloc | 352-507:3015 |
| Aaloc | 187-348:2305 |
| Aaloc | 37-183:797 |
| Aaloc | 1-33:1 |
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