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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000402_pilon:32225..39198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018096 ID=XLOC_018096|Name=XLOC_018096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6974bp|location=Sequence derived from alignment at sc0000402_pilon:32225..39198+ (Clytia hemisphaerica_ch_hm2_pilon)
gcaacTCCAAAGCCAGaaacaaagcaaaaaagtaaGTAAATCAGGCCTAG
ATCCATACTCTCTTATCAAAACACCActtatatacaaaaaatcacaTCAA
AAGCTTCTCAGCGAGAATATGGTAATTATTCCCCAATTTGCATTTGTTTA
CATTGGTTATGAATTTCATGCCAAAATACGGTTGGTAAAGATAGCCAATC
AGATTTATGGATTTTCgattaaatttatcaaaacaatgAAATCACGTGat
tttaacagccaatagaattccgCGTTAGAAACTGACATCTTCATACTTGG
CTATTCCGTCTTATCTTcctatttcatttgtttttattttttctaaggga
CTGTATACACAGGGACAAATTGTAAATATAGATTAGTGTCTCTCAGCTAA
ATCGGATCTAGCTATGAACGGTTGTCAGGAAATGTATTCCGTGCTTAAGG
ATATTATTAACAGGTAGGCATGTTTCAGCCAGTAGTTCGAGAGCTTTCGG
CCTTTCCAACCATCCTCAACGTGTTCGCCGTATcgaaattgtcaaaaaag
ttttgtcagaTCGAACACTAGCGGTCTCTTTGATTACACTCCGGTTGttt
ttttCTACGAAATAACGGAAATGAATAaacccggtttttggtgaggtatt
GTTAGGCATGTTTTACATTTCCAGCATTCCAACGACAAATTTGTAAAAAG
AATCGTCCAAAGAAACCATTGTTAAGATGTGCACAAGATGACTTATATCC
AAACATTGTTAAAGCTTCGTATGGTCGTCATGGTCCCAATGCACAAAAAG
TTTGTTTGACTTATCGTCCTTGGGGATACATCCCAAGATGTTACGAGGAA
GTTACAACCAAGGTATACTTTTATTAAGCctacggatgttcttaactttt
tgaattttaagactaaaaatgttctcaacattttCTTATGTGCACccttt
ttttgaagattttattccattttcctttgaaattgggtgctttagagtcc
acaaaaccttaaatgtttttaacatgttcttgctTAAACTAAACATGTCC
TTATGAGTAGAACATTATAAagctgcaatctgattggatgataTCAGAAT
TAAGAGATCTTGAAATGGCGTGCtttctattgtttttctaacagccaatc
agattgcagctTTATAATGTTCGCCAATAAGCTTATGAGGATTTAATTGA
GTCTATAATAATCTTCTCATCAATGAAGcataagcccaaagggctagaat
cgaatatctttaacctttctcaggcaagaaaaagtgaagccttaaaatag
gcgccgtatttttgacgatggGTCGAATTtagcaatttctttgttttcga
atgatatttttttcgaaatttagcggttaATTTTAGTTCCAATCtgccat
ttgtgtaaaaaccaggtggGCCGGCGCTAGGCCGTgaaactttggtagga
tttgttggctttaaatcctaccaaggagattcgcttttagcccttcgggc
ttatattCATTGTTTCTCACCACTATTGATCACAGGTTCAAGATGTTTGT
AAAGGGAAGAAAGTTTGCAATCCAGAAGCACACAAAAACGCCATTTTGGG
AACCACTAGTTTCTGTTTGAAACGTGACGGTCAAACACCGTACAGACAAT
ACTACTTCGAAGTTGACTACAAATGTTCCGCTCAAAGTAAGCctttatca
tttatttttttataagaaaaatgaggcTCACTAAGAACATAGGAaaatgc
tgagcctggaatgACTGAAGTATAAGCAAATATCAGCTATCAAAATCGGG
TATAAAGCCTGGTATACCTAACAATTTACGCGAAATTAAGTATAGGATAA
GAGCGATTTAGGGATCAAAGTGGCCAAAATAAGAGAATAGCAGagcctct
ttttttttctaaaagcaaTTTCGGAAAATGGGGCTCACTTGGAATAAATT
AGGAACAGACTGGGGTTTTATATGACAGAATTTTAAAGCAAatgtcaaat
tatttttgaaagttgggGGGTATCAAGTCTAAAAAATATCTATTTTTTCC
AAGAAACTAAGGCTGAAAGAGGTCAAAAATTGGGAAGCACTGAAGGGTTT
AGCTGCAAAAAGCGTTTGTCCATTTACGATAAGTTTCCATACATATTTAT
ACTACCATGTTGAGCCCATTCTTCAGAGGAAAAGATGATTCTTCCTAAGT
TTCACatgaaaacgaaaaagaaagacTGTCGTGTGAGCCAAAAAGGGAAT
GTTTTATAATTAtgaaatcatatttttcttatttaagTTGCTTACTGTCA
AGACACCAATGTGGAAACTGCTAAAAAAGCCACCTGTCAGAATGGACATG
CTCTGTTTATTGATAATGCAAGACTTGTTGCAAAGCTTGGCCAATGTACA
AAGAACTGGGCCAATTCATCCAATTATATTTGCGAACAAGATATCACAAG
TACCATTGCAAAGTAAGATATTTTTTCCCAACtatatgtttttgtttata
agcaagtgtatgccccttggtcaggctcgtgtatgcttaagttcttaaag
catccagacatagcttatgcttattatatgcttatgattcaccccgagcc
aagttttcagtaaaatttcagaacttttgtaaaaaaaaattcagattttg
ggagcagtggaatgctagctagccgtggaatatctttttggacctacccc
ggtggggtggaggtgaaaaattgtgaaaaattggatcattaattttttct
gatttttagcatgaaagtagggtacaatcatagttaaaggatggctcaag
cagatttttgcaaaaaaatttttttggctcaaaaatcgtatttttatcta
taagaaccacttttaataagaatacatcaatgttcttagccatattatta
ttattatttttattaatttttttacgatgaaaatgtcacggtggaggcta
atgatttgagttttctgtaaacacttattatttttttggctgaaaaacga
atctttatctataagaatcactatttatgagtatatatcaatgttattag
ccaaattgtttttttattattattttttctaacagaagaaaatgtcacgg
tagagttcgacggtttgagttttctggaaaccttatttattaagctgtgc
atttttctgatagtggtttttataaaGaaaagcgcttaatagctttttta
tttctttttcaaaaatctttttcaatagtgttgatagtttctctcaatag
atatgctttcattttctttatttttttgtattttgaccagttatgtctta
tgtgtttcattgtttcaatgttcactgattagtttgataaccaggtaggt
ccataaaagtatcgcttgtttaaCTTGACCTCtatcaaacctttttaaac
agataaaaaatgacaacttgaaaaatattccaggcTGGCGTATATTATTC
TATtcgtatatgcttatgttatgcttaggaactCTGCAACTCTGAaactt
catatgcttataagcgttatggtTATAAGAAGAAACATGTAAACGATTGT
TTTTTAATCCAGTTTGACGTTGTTTCAGCGTTCCTCTGATGTTCAAAACT
GATCATAACGTACACCTTCAAAATGATATTCAAAGTTCATAAAATGTTAC
ATTGCCATTATAGGCGGGCCTTACTTCCCCATTTTTGTTCGTTGGGTTTG
CTGATTTAGCAGTGGTCAAATACCGAGGTCATGAATATTTTGAAGGATAT
TGAATCGATATTTCTATGTTAAACAGGTCCCATTTAGGTCGGACATTCTG
ACTTTAGCCTGAAACACATTCAAATCACATAATATGAAAAAGGCTCCCCC
AgtggtaactctgatcacgatatcgcgcaatttttgtcTTCCATCACAAT
CAcgtaaaacagcaaaaaacttggataatcacgcatccctttgaaaaaag
tctcaATGATGTATCAgagctcaaaaatctttcaaatcacgatcacgctt
TGACCTTTGgtcacgcaatcacgaagaaaaaatttccaaatcacgtagtC
ACGTTAGAAAAAATGTCCCTATCACATAAACGGCTTGGAGGCCTCCTGAA
GATTAGCCAGTATCTTTAAGATATATGTGTCTGGTGGTTCTCTTTAAAGG
CTCGAGATCAAATAAACTCCGCTTGATTTCTTTTCAGATATTTCAACGGA
aaacagaaaattcaagatgatATTTACGATTATTTTGCTTATCTGTGTCC
ATCAtacaaaatgttgaaattgaCTTACGAATGTCAAGATGCAGCACAAG
ACAACCAAGGTTTGTATTAGcttatacgttttttataagaatatcccaaa
attttgaagctttttcgTGTTCTTAATTTCTTATGAAATCGCACAAATaa
cattcacaaaatggtgacaaTAAAAGCATCCAAAGGcttgaaatatttta
ggtgttcttataaaaaacgtgtattgtacATCTCCGGATTTTGACAACAG
CAGCGGACGATTGGATATAGGAGTTTTTTGTGACTGGCGCTCTCGGTTAT
AGAATTGTCAGTTAAAATAGCTTTGGCAGAAAAGGCCCGCCTATTTGACC
AGAAAAACGAGGGGTTTTAATTGCACTTATTTATCGTCATGTTTAccgtt
ttttttaatcaaattccagctggcacaaaacgttgtttcaacctTTATCT
TACGTTATATGAACTTTGTGAACATtggataaacgttaaaacaacgttgt
atgccagctTGGATAAAGCATTTGAATAGTCTTATTCGTCTAGTACTGAC
TAGCTATTCACATAAAATATGCCGCAATAAAAAATCATGCACGTTTTAAC
TTTCAGATAAAGATCATTTTGTCTATGATGACAATTTAGGTGAGTTTTCT
TATAGGGGAAAGAAGTTGTTTAAATCTTACatggctattccagaaaaaaa
ctgtaccccctatgttgaggagatctttttttGGTAAAGGTGACCCCACT
Ggaatctttttcagtttttcaggacccccttggattttttcatcactttt
tggactacccaggattttgtcattttactgaccaccctggttttttacct
cattttactgactcCTTGAAAAACCAGATCTGGctggatttttcattttc
cctgGATCTCACACCTCCTCAAAACAGGGGATACAGACTATTTCTTGAAT
AGCCCATTCACTTTGGCCCACTTTTAATTTATCACAGACCCGCTAACAGC
ACAAAGTGCTAGAACGCTCATCTTTTCACAAATAAAAAGACCTCTTGAAA
TTTCGTGGAAAATTTGGCTTTCAGAGGTTTCTTGTGCGAgttttgctttc
aaaattttttgtatCAAAAAGCTGTATGGTATAATTAGAAGTAAATGCCG
GTGTTTTAACCTTACAATATCAATAAAGTCTGTAATGGGCAGTGAATGTG
TTTATACTacttacagttgactctctctctaattcgatcttcaagggacc
aacatttttcttcgaattagaaaaagattcgaattacagagaatgATTTA
TACCACCCTCCacctgaggggaccaatatcctagttcgaattacagaaat
attcgaattatagaggttcgaattacagaaagtgtTGACTGAATTTGTAA
ACAATTTTAAAGGGTTTTGTGAAAGTTGGGAGGTCAACAAACCTTTGCCC
TCCTTTTTCTGACGTTAATCGAAAAATGATCAAAAGCAGCCATCTCCTTA
GCTACTAAGTGCTCGAAACCGTTCATCCCACAAAAATGGTACTTAATGTC
CTCATTAAATTACCGAAAGGCAGTCAGTCGGCAATCTTTGACAGCATGAA
GACTATTTCataatgatgattttctcaTAATTTAACTGTACTTCATCTTT
ATTTGAAAGCATAACGTTTTAAGCATACTGGACCctagatttggtgaaaa
aataagcatatcttTAGCATATATCAGTGAGCTTTGGTCATTAGTCATTG
TTCTGGGTTTTGTACTTGGGAaggttcatttttcttttccattttaaatg
gttcaaactttttttcggaaaattgagCATATTGTAAGCATAATTTGAAC
TTGATCCCAAAATGTAGTTTTAGCATAACTGAGCCTGGTTTCCAAAAATA
ATTATGCTTAGaaaaaaaCACATGTTTACCTCCAGATTGGATTAGTCAAT
TTTCTGGAGTTACTTTTTACTCATCAAGATAGCTCTCACTACACTTGTCT
AACCGTACAGTAAAATTATAAAAGCCACAGTAACTAACACGGAAGAACAA
TATAGAATAAAATCATGGATTAACAGACCTTTTTGTGATGACTCGAAATA
GTTTAACCCTACTGGAATTCCAGGCACTTTTAACTTTAAACCCCCTCTAA
AACCTTatgaaaatcttgaattttgcaGGGTTTTTACAACTCGTAAACCG
ACTTTCACAAACTCAGTGATTCTCTGGTTTTTGACTTTTCTGAATTCTGA
CCGATAATCAATatatgttttttgaaattgaaaggtttttaaatgaaaaa
aggaatagAAAATTCCCAATAAACTCTAAAGTTCAATACAacatttcaaa
atgttctttatcAGGCAGGAAATATCAATCGCagtaatagacgatatcag
ctttcgataaatgcaatgcattctggtttctagggactctcaaaggaatt
ataatctattataattgatctattataattcctttgagagtcccgagaaa
ccagaatgcattgcatttatcgaaagccgatatcgtctatttaaaaatgt
attttttccattgagtttgaagccccgaaGAGACTAGAGAGGAATATTTA
ACTTTCATTAAGcatgaaaaagtgaagccttaagtttgACCCGCACTTAG
AAGGACTTTGAAATCAATAATTTTTACCTTTCCTTACAGGTTATGGTAGC
GGTGGAGGACCTGGTCCAGTCACT Coding sequence (CDS) from alignment at sc0000402_pilon:32225..39198+ >XLOC_018096 ID=XLOC_018096|Name=XLOC_018096|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1470bp|location=Sequence derived from alignment at sc0000402_pilon:32225..39198+ (Clytia hemisphaerica_ch_hm2_pilon)
gcaacTCCAAAGCCAGaaacaaagcaaaaaagcaacTCCAAAGCCAGaaa
caaagcaaaaaaCATTCCAACGACAAATTTGTAAAAAGAATCGTCCAAAG
AAACCATTGTTAAGATGTGCACAAGATGACTTATATCCAAACATTGTTAA
AGCTTCGTATGGTCGTCATGGTCCCAATGCACAAAAAGTTTGTTTGACTT
ATCGTCCTTGGGGATACATCCCAAGATGTTACGAGGAAGTTACAACCAAG
CATTCCAACGACAAATTTGTAAAAAGAATCGTCCAAAGAAACCATTGTTA
AGATGTGCACAAGATGACTTATATCCAAACATTGTTAAAGCTTCGTATGG
TCGTCATGGTCCCAATGCACAAAAAGTTTGTTTGACTTATCGTCCTTGGG
GATACATCCCAAGATGTTACGAGGAAGTTACAACCAAGGTTCAAGATGTT
TGTAAAGGGAAGAAAGTTTGCAATCCAGAAGCACACAAAAACGCCATTTT
GGGAACCACTAGTTTCTGTTTGAAACGTGACGGTCAAACACCGTACAGAC
AATACTACTTCGAAGTTGACTACAAATGTTCCGCTCAAAGTTCAAGATGT
TTGTAAAGGGAAGAAAGTTTGCAATCCAGAAGCACACAAAAACGCCATTT
TGGGAACCACTAGTTTCTGTTTGAAACGTGACGGTCAAACACCGTACAGA
CAATACTACTTCGAAGTTGACTACAAATGTTCCGCTCAAATTGCTTACTG
TCAAGACACCAATGTGGAAACTGCTAAAAAAGCCACCTGTCAGAATGGAC
ATGCTCTGTTTATTGATAATGCAAGACTTGTTGCAAAGCTTGGCCAATGT
ACAAAGAACTGGGCCAATTCATCCAATTATATTTGCGAACAAGATATCAC
AAGTACCATTGCAAATTGCTTACTGTCAAGACACCAATGTGGAAACTGCT
AAAAAAGCCACCTGTCAGAATGGACATGCTCTGTTTATTGATAATGCAAG
ACTTGTTGCAAAGCTTGGCCAATGTACAAAGAACTGGGCCAATTCATCCA
ATTATATTTGCGAACAAGATATCACAAGTACCATTGCAAAATATTTCAAC
GGAaaacagaaaattcaagatgatATTTACGATTATTTTGCTTATCTGTG
TCCATCAtacaaaatgttgaaattgaCTTACGAATGTCAAGATGCAGCAC
AAGACAACCAAGATATTTCAACGGAaaacagaaaattcaagatgatATTT
ACGATTATTTTGCTTATCTGTGTCCATCAtacaaaatgttgaaattgaCT
TACGAATGTCAAGATGCAGCACAAGACAACCAAGATAAAGATCATTTTGT
CTATGATGACAATTTAGATAAAGATCATTTTGTCTATGATGACAATTTAG
GTTATGGTAGCGGTGGAGGACCTGGTCCAGTCACTGTTATGGTAGCGGTG
GAGGACCTGGTCCAGTCACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000402_pilon | genome | sc0000402_pilon:32225..39198 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-735:6942 |
| Aaloc | 670-699:4859 |
| Aaloc | 547-666:4189 |
| Aaloc | 373-543:2290 |
| Aaloc | 220-369:1536 |
| Aaloc | 34-219:677 |
| Aaloc | 1-30:1 |
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