XLOC_018095 (mRNA) -

Overview
NameXLOC_018095
Unique NameXLOC_018095
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000237_pilon:252190..253221+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018095 ID=XLOC_018095|Name=XLOC_018095|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1032bp|location=Sequence derived from alignment at sc0000237_pilon:252190..253221+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTGCACGTGCATCagacttttctttttccttctttCGTCGTAAAGC TGTCAAGATCATGGCTTCATTCAGTAAATGTAAGTTATATATACTGTACT AAGTTATATAATACAGTTTCtttctaaatataaaaaaatactgTCTTAGC TATAAAACTTAGCAACTTGGAACTAACTAGCAAACTTTGCCACATGTATT TGAATTGAGaagtttaataaaattttcacattttttagcTCAACCATCAC CATCTAAACGAATGAAACACAGCGATGAAGTTAGTGGTTTTGTCATTAAC TGCCTGGATGAAATTGTCAAAACACAATCGAAACCAAACAATTATCAATC ACCGAAAAAATCGCGTCCAATTAACTGGTTCAATTTTGGTTTGGTGACAG AAAACAAGAGATATAGATGTGTAAGCTTTTGTCCGCATCACATCGACATT GTAAAGTCTGTCAATAATAGCAAAACATATGGTTTAAAGTTGACAAACGT TGAATTTACTGGGGGTGAAGAATATAAATTGAATATAGAATCAAGAATCG AAAAAATAGAACTGCATAAAAAATACGATCCTGCGCACGCACCATTCGTA ACATTATCAGATTTGTATGGAAAAGAATTTGGCGGATTGGCCTCAATTAA ATGCAAGGTAACAAAAGTCGAAGAATTTGAAGGAAAAGTCGTCCGTTATG AATATATATGTACAGATCCATCAACGTCAATAACACTATCATCATTTCAA GACTTAAAACTCCAAAAACTCAAGAACTATTCGATTACAGATCTAACCAT ATCACACTTCAGTAATGAACTGAGATTGCAACATTCACCAATAACAAACA TAATTGAGTTaaaaaaggcagaaataaaattggactctcaaaagaacata aaaattgaaaatgtcaaCATTACGTCTCTTACAAAACCTGAAATTGATTA CAAATGCAAACGATGTGACCATTTTTATGATCAAAAGCTGGATTTTGTAC CATTGTCCGAAGTGCTCGTTTACATGTCTTGA

Coding sequence (CDS) from alignment at sc0000237_pilon:252190..253221+

>XLOC_018095 ID=XLOC_018095|Name=XLOC_018095|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1746bp|location=Sequence derived from alignment at sc0000237_pilon:252190..253221+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGCTGCACGTGCATCagacttttctttttccttctttCGTCGTAAAGC
TGTCAAGATCATGGCTTCATTCAGTAAATAAAGCTGCACGTGCATCagac
ttttctttttccttctttCGTCGTAAAGCTGTCAAGATCATGGCTTCATT
CAGTAAATcTCAACCATCACCATCTAAACGAATGAAACACAGCGATGAAG
TTAGTGGTTTTGTCATTAACTGCCTGGATGAAATTGTCAAAACACAATCG
AAACCAAACAATTATCAATCACCGAAAAAATCGCGTCCAATTAACTGGTT
CAATTTTGGTTTGGTGACAGAAAACAAGAGATATAGATGTGTAAGCTTTT
GTCCGCATCACATCGACATTGTAAAGTCTGTCAATAATAGCAAAACATAT
GGTTTAAAGTTGACAAACGTTGAATTTACTGGGGGTGAAGAATATAAATT
GAATATAGAATCAAGAATCGAAAAAATAGAACTGCATAAAAAATACGATC
CTGCGCACGCACCATTCGTAACATTATCAGATTTGTATGGAAAAGAATTT
GGCGGATTGGCCTCAATTAAATGCAAGGTAACAAAAGTCGAAGAATTTGA
AGGAAAAGTCGTCCGTTATGAATATATATGTACAGATCCATCAACGTCAA
TAACACTATCATCATTTCAAGACTTAAAACTCCAAAAACTCAAGAACTAT
TCGATTACAGATCTAACCATATCACACTTCAGTAATGAACTGAGATTGCA
ACATTCACCAATAACAAACATAATTGAGTTaaaaaaggcagaaataaaat
tggactctcaaaagaacataaaaattgaaaatgtcaaCATTACGTCTCTT
ACAAAACCTGAAATTGATTACAAATGCAAACGATGTGACCATTTTTATGA
TCAAAAGCTGGATTTTGTACCATTGTCCGAAGTGCTCGTTTACATGTCTT
GAcTCAACCATCACCATCTAAACGAATGAAACACAGCGATGAAGTTAGTG
GTTTTGTCATTAACTGCCTGGATGAAATTGTCAAAACACAATCGAAACCA
AACAATTATCAATCACCGAAAAAATCGCGTCCAATTAACTGGTTCAATTT
TGGTTTGGTGACAGAAAACAAGAGATATAGATGTGTAAGCTTTTGTCCGC
ATCACATCGACATTGTAAAGTCTGTCAATAATAGCAAAACATATGGTTTA
AAGTTGACAAACGTTGAATTTACTGGGGGTGAAGAATATAAATTGAATAT
AGAATCAAGAATCGAAAAAATAGAACTGCATAAAAAATACGATCCTGCGC
ACGCACCATTCGTAACATTATCAGATTTGTATGGAAAAGAATTTGGCGGA
TTGGCCTCAATTAAATGCAAGGTAACAAAAGTCGAAGAATTTGAAGGAAA
AGTCGTCCGTTATGAATATATATGTACAGATCCATCAACGTCAATAACAC
TATCATCATTTCAAGACTTAAAACTCCAAAAACTCAAGAACTATTCGATT
ACAGATCTAACCATATCACACTTCAGTAATGAACTGAGATTGCAACATTC
ACCAATAACAAACATAATTGAGTTaaaaaaggcagaaataaaattggact
ctcaaaagaacataaaaattgaaaatgtcaaCATTACGTCTCTTACAAAA
CCTGAAATTGATTACAAATGCAAACGATGTGACCATTTTTATGATCAAAA
GCTGGATTTTGTACCATTGTCCGAAGTGCTCGTTTACATGTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018095XLOC_018095-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000237_pilongenomesc0000237_pilon:252190..253221 +
Properties
Property NameValue
Aaloc82-873:241
Aaloc1-78:1