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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000237_pilon:222491..226915- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018089 ID=XLOC_018089|Name=XLOC_018089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4425bp|location=Sequence derived from alignment at sc0000237_pilon:222491..226915- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAAGCTGATCTTTATTGGTGTCATTCTTTGTATGTGTTGCCCATG
CGCAGATGCATACAAATCACCGTACAATTGGGGGGACCGTTATCATGGTA
AATTTATTGGCTCTACTATATATTGTGATCCAAAGCCATACGTCCCCGGT
GGTGGTATTAAAACGATCCAAAAAATTAAGGCTCCCAAAGCTACACTTGA
AGAAAACGAAATCCTCAGTGGTTTTTCAGCAGGTACCCAAGCAACAGGAT
TTATTGCAGGACTTACAGGTTTCATTGGAGAAGGGTCGTCCAAAATAAAA
AACGTTCAAAAAGTTTTTAATACTGCTTCAAAGATGGCATCGACCATGTG
GTTTGTAAGTGGAATCTTGTCTTATCTTGGAGGTGAACCGAGTGCTCAGG
ATATTCTTGATGCTACTAATAAAGCTTTTGAGGAGTTTGCCGAAGACGTC
AATAACAGGATGAGCGAAATGAAAGGCTATGTTGATGGTAAAATTATCGA
GTCCAGAGCCATCATGTTAAAAAGAGAGTACCAGACGTTGATGCCGAAAT
GGTCGGCCTGTCTTCACCATTATCATGAGGAAACTGAAGTGAACCAATGC
CAAAAAAGAGCATACTTAGCTATTCGAAGCGAAAGAGCCAAATTTATGAT
ATTCAAAAATCAATTACAGAAGGGGACAGTAAGCCGGGAACAGTTGAAAG
AATTGGAAATGCAATTTCCTGCATTCCGAGATTATTCCTTTTTAACATTA
CTCGTTTTGCGCTCAGTAAGGGACAGTTTCAAAAACGAAAGAGGCGAATG
GGACGAATACATCGCTTATTTGAAAAAAAGCATCACAGTGTCACAAGAAC
TTATTAAATACGCTCACGAAGTCAACAACGCTATACTCAACTTTTATGGT
GCACAATCAAAGAATCTCTGTAAGAAGACAATGCATTGTAAAGAAATGAA
GGAAACCAAAAAAGCAAAAGACTTTTGGAGTGATAAAAAAGTTGTCGACA
GGTCACGCGCATGTGAATGTCGAATGTTCGCTGATGCTTTACCTCATGAA
TTGTGTGAATATCAAGCACACAATCGGCCAAATGGTCAATGGCATGATTT
CAAAAAATGGCTTGGAATTAACGCAAAAGACATGCTGTACAGACACGAGG
ATATTTATTGGAAACAAACATTATTACTTGTTCAAAAATATTGGCAAGAG
ACTGTAATGTCTCAAGTTCAATTGTGGGAGCAATTCGCAGTCGACACTCA
AAAAGAGCTCCTTTCAATTGCAGGTAATACATAATAATTATTATTGGGCT
ATCGGAAAAAAACCGTGCAACCCCTGTTGAGGAGGTCGCCAACTATTCAC
ACTCTATCCTCTTGGAATTCCAGACAATTTTAGGATTCTACTCCTCTGGA
ATTCCGAATTTTTAAAGATTATCAAACCTTACCCCCATGGAATTCCGCTT
ATTTCTAATGGATTTTTGTCTACCCCTATGGACTTCCACTGCATTTCAAA
CCCTACTTACCCCTTGGAACGGAAATGGACCTCCTCAACAGGGGGTGCAC
GATTTTTTTCTGGAAAAGCCCATTATCATCAATTAATTTTGAGTTGGTAA
CAATGATAGGACCTAGTGTCCTAAATAATTACAGCTTTGGCTGTTTACTA
GTAAAGTCTAACTTTCATAAAAAAAGCTATTTACCAAGCTATCAAGCTCT
TTCTTATAGTGGATAATAAAGTCGTGAGCAATTGCACTGATGATTTTTAA
ACAAGTTTTCAAATGTTCCATTCATTTAGACAATTTAGGTTTTTCTGCAT
TTTCCACCAAGTCTCAGAAAACGGCGGTCACATATGGTACTCAGTGTTTT
TAATGGAGAGCAATTACTCCCATAAAATAAAAAGAATAATACAAAAGAAA
CGCCCTCCTTCATTAATTTTGAGTATTTTCTGTAAGCGCCGTTGAATAGG
ACGAAAAATATCCATGTTGAACTTGGTATCGTGCAATTTAAGCCTGTACC
TAACCCATATCGGGGTGATTTTTCAAATTTTTAAAAAATCTGTCCGTGTG
AGGGTTTGTAACGTCAAAGCAAAGTTTACCAATGAAACTCTTATCTACAG
GTCCGCCAAATCTCGCCTTGGGTCGACCGACTTCTCAATCAGGCCAAAAT
AGCGGTAGCAATCTTGCCGTCGATGGAAAACATGACAAATGCTTTCCTCA
GGATCACCAGAGTACGAACACAGGTCTGCAACAGAATCCATCTTGGACTG
TCACACTGGACAAAGCTTACGATGTCAGATACATCATTCTTTATGTTGGT
AATTACAACCCTTACGCCCATGCAAACTCACTTTCACATACTGATATTTA
CGTTTATGATAAAAACAACAAACCACATTTTTGTGCAAATACCGGAGACA
TGAGCGTATCTCGTAAAATGATACGAGTTACGTGCAATTTTGGTGCAATA
GGAAATAAAGTCAAGCTTGAAAAGCAAGTCCACGGACAGCTGAATTTATG
TGAAGTTATGGTTTATGGACAAAAAGGTTAGTGAAAGCATTCTGCTTTTG
ATTTCTGCTAGCTACTGTGGGTGCCGAAGGGCAAGGTCAGTGGCTTCCCA
GCTCACACACAACGTTGTTTTAACGTTCATCTAACGTTATGAACGTTATA
TGGACGTAAAAACAACGTTGTGTGTCAGCTGGGTTAGGTAGAGCAAGAAA
AATCATTCTTTATACCGCATGAGACTTGGCCGGTTTAAGAGATGGAACTT
TTACCGCTTACTTTTCTTCACCCCGCTTTCCGAAAGCAATGAAAATGCTA
GATCTAATCTATTGGGCCGATTTTGTTTGCTTTTTCTCTTTTTTTTTGCT
GGAGAAAACCTTATAGGTCGGACAAAAATTTCTTTATGCATGTTTCGCTG
TTAAAGACTAAACCTTATCTCAGCTGAGATAAAGAATGTTGCAACTTTTG
ATAGAATTCGAATCAAGTTGCGGTTATAAACTCGCGTTGAAAAGATATCT
ACGAGTGGAATAATATCTAATATAGAAAATTGAAAAAAATAAAAATGAAG
AAGAAAAAAATCAACTTCTTGTAGAATCGTGGTTATAATTACCATTTCCA
AAGGAGTTGTGCCTCATCTTAGATCATCATCACTGTGAAAAAATATTTCA
CAAATATCCAGTTGATCAAAAGATATCAAGCAAAGTTTACTAAGCAGATA
TTCAATAGGTAAAAGTTGGTTATTGAGATTTATTTACCCGAGGTGACGTA
ATATTCATCAGGGTTAATAAATCCAATAACCAACGTAAACCTATTGAATA
TATGTTTTATCATATGCCCAAAGACGAAAACAAGACATAAGTTTTCTATT
TTGTAGAGAGATTCACACGAATGAAACATTTGAATGTTTTTCTTTCTAAT
TGTTTTTTAATGACTTAAGTCATTAAATTGTTCACAAAATTCACAATTGA
ACTATTTTATTGTCTCTCTTTAATTGCAACAGAATAAATGTGACAAAAAA
ATCAAATTTCGAAAAGAAAATATAAAAAATCTACCGTAGTATATCAGGAA
TTATTCAATGGCTGTTTTTGCCTACGGGTATATAATAATCCCGGGGGGGG
CACTCACGGTAAATGACCTACCAGACGTTCGGCCCTGAAGGGTAGGTTTT
TCATAGTTCAGCTAGTGCACTGTAAGGGTAGGAAATTACAAAACTGCACT
GAACTGCACTGCAAGGGTAGGAAGTTTTGATAAAAGGCCAATTTCTTGGT
AAAATTGGCACAAAATTGGTCAATTTTGGAGGAAAAATTGTAAGGGTCCG
ATTTTAGAAGCCAAATTTTGGCCCGAACGTATGGTCGTTTTCAGATCGAG
TGCCCCTCCCCCCCCCGGGATAATAATATTGGTTAATTGACAATCATTTT
TTGTTGTTTTTTACTACTTTATAGAGTTAACTAGCAATAAACTTTGTTTG
TCTGTTGATTGAATGAATATTTTTGAAAACAATTTTCACAGTGATGAAGA
TTGAAGAATCACTCCTGTGAATATGGTAATTACAATTCTACCAGAAAATG
ATTCTTTTCTTCTTCATTTTTCATTTTCATTTTTCATGTATTTTTCAAAT
TTGTTTTGTTTCATCATGTTCCACTCACGAATGTCTTTTCAACGAGCACA
AAATCGCAATATGATTCGAATTATATTAAAAGTTACAACCTTTCTTGTCT
CAGCTGCAAATTTGAGATTAATGAACAACATCGTCTATGGACAAATACTA
TATTTCTTTTTCAGTCAAATCTTATGGTAGGAACCTTGCATTAAACGGTT
TAACAAGGCAATCCTCTACCCTATCCAATTTTCCAAGTTCCAAAGCTGTA
GATGGTAACAAAGCTAATTGTTCAAGCAACACGGCATGCTCAAGCACAAT
GGTTTCACAATCTCCTTACGGAAAA Coding sequence (CDS) from alignment at sc0000237_pilon:222491..226915- >XLOC_018089 ID=XLOC_018089|Name=XLOC_018089|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3720bp|location=Sequence derived from alignment at sc0000237_pilon:222491..226915- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAAAGCTGATCTTTATTGGTGTCATTCTTTGTATGTGTTGCCCATG
CGCAGATGCATACAAATCACCGTACAATTGGGGGGACCGTTATCATGGTA
AATTTATTGGCTCTACTATATATTGTGATCCAAAGCCATACGTCCCCGGT
GGTGGTATTAAAACGATCCAAAAAATTAAGGCTCCCAAAGCTACACTTGA
AGAAAACGAAATCCTCAGTGGTTTTTCAGCAGGTACCCAAGCAACAGGAT
TTATTGCAGGACTTACAGGTTTCATTGGAGAAGGGTCGTCCAAAATAAAA
AACGTTCAAAAAGTTTTTAATACTGCTTCAAAGATGGCATCGACCATGTG
GTTTGTAAGTGGAATCTTGTCTTATCTTGGAGGTGAACCGAGTGCTCAGG
ATATTCTTGATGCTACTAATAAAGCTTTTGAGGAGTTTGCCGAAGACGTC
AATAACAGGATGAGCGAAATGAAAGGCTATGTTGATGGTAAAATTATCGA
GTCCAGAGCCATCATGTTAAAAAGAGAGTACCAGACGTTGATGCCGAAAT
GGTCGGCCTGTCTTCACCATTATCATGAGGAAACTGAAGTGAACCAATGC
CAAAAAAGAGCATACTTAGCTATTCGAAGCGAAAGAGCCAAATTTATGAT
ATTCAAAAATCAATTACAGAAGGGGACAGTAAGCCGGGAACAGTTGAAAG
AATTGGAAATGCAATTTCCTGCATTCCGAGATTATTCCTTTTTAACATTA
CTCGTTTTGCGCTCAGTAAGGGACAGTTTCAAAAACGAAAGAGGCGAATG
GGACGAATACATCGCTTATTTGAAAAAAAGCATCACAGTGTCACAAGAAC
TTATTAAATACGCTCACGAAGTCAACAACGCTATACTCAACTTTTATGGT
GCACAATCAAAGAATCTCTGTAAGAAGACAATGCATTGTAAAGAAATGAA
GGAAACCAAAAAAGCAAAAGACTTTTGGAGTGATAAAAAAGTTGTCGACA
GGTCACGCGCATGTGAATGTCGAATGTTCGCTGATGCTTTACCTCATGAA
TTGTGTGAATATCAAGCACACAATCGGCCAAATGGTCAATGGCATGATTT
CAAAAAATGGCTTGGAATTAACGCAAAAGACATGCTGTACAGACACGAGG
ATATTTATTGGAAACAAACATTATTACTTGTTCAAAAATATTGGCAAGAG
ACTGTAATGTCTCAAGTTCAATTGTGGGAGCAATTCGCAGTCGACACTCA
AAAAGAGCTCCTTTCAATTGCAGATGGAAAAGCTGATCTTTATTGGTGTC
ATTCTTTGTATGTGTTGCCCATGCGCAGATGCATACAAATCACCGTACAA
TTGGGGGGACCGTTATCATGGTAAATTTATTGGCTCTACTATATATTGTG
ATCCAAAGCCATACGTCCCCGGTGGTGGTATTAAAACGATCCAAAAAATT
AAGGCTCCCAAAGCTACACTTGAAGAAAACGAAATCCTCAGTGGTTTTTC
AGCAGGTACCCAAGCAACAGGATTTATTGCAGGACTTACAGGTTTCATTG
GAGAAGGGTCGTCCAAAATAAAAAACGTTCAAAAAGTTTTTAATACTGCT
TCAAAGATGGCATCGACCATGTGGTTTGTAAGTGGAATCTTGTCTTATCT
TGGAGGTGAACCGAGTGCTCAGGATATTCTTGATGCTACTAATAAAGCTT
TTGAGGAGTTTGCCGAAGACGTCAATAACAGGATGAGCGAAATGAAAGGC
TATGTTGATGGTAAAATTATCGAGTCCAGAGCCATCATGTTAAAAAGAGA
GTACCAGACGTTGATGCCGAAATGGTCGGCCTGTCTTCACCATTATCATG
AGGAAACTGAAGTGAACCAATGCCAAAAAAGAGCATACTTAGCTATTCGA
AGCGAAAGAGCCAAATTTATGATATTCAAAAATCAATTACAGAAGGGGAC
AGTAAGCCGGGAACAGTTGAAAGAATTGGAAATGCAATTTCCTGCATTCC
GAGATTATTCCTTTTTAACATTACTCGTTTTGCGCTCAGTAAGGGACAGT
TTCAAAAACGAAAGAGGCGAATGGGACGAATACATCGCTTATTTGAAAAA
AAGCATCACAGTGTCACAAGAACTTATTAAATACGCTCACGAAGTCAACA
ACGCTATACTCAACTTTTATGGTGCACAATCAAAGAATCTCTGTAAGAAG
ACAATGCATTGTAAAGAAATGAAGGAAACCAAAAAAGCAAAAGACTTTTG
GAGTGATAAAAAAGTTGTCGACAGGTCACGCGCATGTGAATGTCGAATGT
TCGCTGATGCTTTACCTCATGAATTGTGTGAATATCAAGCACACAATCGG
CCAAATGGTCAATGGCATGATTTCAAAAAATGGCTTGGAATTAACGCAAA
AGACATGCTGTACAGACACGAGGATATTTATTGGAAACAAACATTATTAC
TTGTTCAAAAATATTGGCAAGAGACTGTAATGTCTCAAGTTCAATTGTGG
GAGCAATTCGCAGTCGACACTCAAAAAGAGCTCCTTTCAATTGCAGGTCC
GCCAAATCTCGCCTTGGGTCGACCGACTTCTCAATCAGGCCAAAATAGCG
GTAGCAATCTTGCCGTCGATGGAAAACATGACAAATGCTTTCCTCAGGAT
CACCAGAGTACGAACACAGGTCTGCAACAGAATCCATCTTGGACTGTCAC
ACTGGACAAAGCTTACGATGTCAGATACATCATTCTTTATGTTGGTAATT
ACAACCCTTACGCCCATGCAAACTCACTTTCACATACTGATATTTACGTT
TATGATAAAAACAACAAACCACATTTTTGTGCAAATACCGGAGACATGAG
CGTATCTCGTAAAATGATACGAGTTACGTGCAATTTTGGTGCAATAGGAA
ATAAAGTCAAGCTTGAAAAGCAAGTCCACGGACAGCTGAATTTATGTGAA
GTTATGGTTTATGGACAAAAAGGTCCGCCAAATCTCGCCTTGGGTCGACC
GACTTCTCAATCAGGCCAAAATAGCGGTAGCAATCTTGCCGTCGATGGAA
AACATGACAAATGCTTTCCTCAGGATCACCAGAGTACGAACACAGGTCTG
CAACAGAATCCATCTTGGACTGTCACACTGGACAAAGCTTACGATGTCAG
ATACATCATTCTTTATGTTGGTAATTACAACCCTTACGCCCATGCAAACT
CACTTTCACATACTGATATTTACGTTTATGATAAAAACAACAAACCACAT
TTTTGTGCAAATACCGGAGACATGAGCGTATCTCGTAAAATGATACGAGT
TACGTGCAATTTTGGTGCAATAGGAAATAAAGTCAAGCTTGAAAAGCAAG
TCCACGGACAGCTGAATTTATGTGAAGTTATGGTTTATGGACAAAAAGTC
AAATCTTATGGTAGGAACCTTGCATTAAACGGTTTAACAAGGCAATCCTC
TACCCTATCCAATTTTCCAAGTTCCAAAGCTGTAGATGGTAACAAAGCTA
ATTGTTCAAGCAACACGGCATGCTCAAGCACAATGGTTTCACAATCTCCT
TACGGAAAATCAAATCTTATGGTAGGAACCTTGCATTAAACGGTTTAACA
AGGCAATCCTCTACCCTATCCAATTTTCCAAGTTCCAAAGCTGTAGATGG
TAACAAAGCTAATTGTTCAAGCAACACGGCATGCTCAAGCACAATGGTTT
CACAATCTCCTTACGGAAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000237_pilon | genome | sc0000237_pilon:222491..226915 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1702-1860:160 |
| Aaloc | 1276-1698:2324 |
| Aaloc | 1-1272:4426 |
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