XLOC_018010 (mRNA) -

Overview
NameXLOC_018010
Unique NameXLOC_018010
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000606_pilon:62273..63317+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_018010 ID=XLOC_018010|Name=XLOC_018010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1045bp|location=Sequence derived from alignment at sc0000606_pilon:62273..63317+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGGCTCCGATATTCAATCGATCCAGACGTAGTAAAAACTCAAGATAC CGTTTACGTCATCGGTCGAATAGCAAGTTCGAATCCTATTGGAAAATATC TGGCatggaactttgctaatgaaaACTGGAACAAAATCATGGAAATGTTA GTATAACCTCTGTCATTTATttaattgattcgaatcaattttgctccatt gtcccatgGACAAAATTAGCGTGTCTTTTGGGCATTTGCCTCACTTTTTG TCtcatgaaacaaaacaaaaaaaaccatGGGACATGCACtttttttttag tgttggtgggatggagcatgttgcattgaaaaaaaacttctcgtgtccct aaGCATTTTGACATTTCACATGAAAATTGAATTGGAATAACTAtttgtgt ttttatattttcatagagctaaagaaaacaattttcacGTCGCGTACATA ACTTCGAGACTAACCAGTCAATTCACCACTCAATATGATCTGGAAATGGT AAGTTTATTATAAAGTATAAGAATATTTGGACCAAAATATCTCGAAACTT GGTAAAATTACTTTGTGTATGTATTATCATGCGAAGGTGTTTTCATGCTT TCATGTGTTCCTTGATGACGTTAGTAGTTTTCTATAAAGATATTAAATTT TGGTGCTTACCCAAATCTGAATTTTAGAAGTTCTACCTTGTTCCGTTGAA AAGATGTTCAAttttgtatattGCATGAAAAAACAATACATTTgacttga aaaatgtttcaaagatGCTGTTCAAAGGTGTTAACGCATTTAAATGGCTC GTATATCGTTTGGGGTGATTTTGGATTTTCGTGCCGTATTTAGAACATAA ATTCGAAACAAGAATGTTTAAGGATTTTCACTTTCTTACCATTAGGCGGA GGAAATGTGGAGAAGATATCCGGATGCCGGAACCGGTGCTAATGCACGTC TCCAAGGCATTGAAAAGATCAAGGGAAACATTTATTGGCTTTCTCAAAAT TATGGAACCCTTCAGGCTTGGTTGAAGAAAAATACAATGCAATGA

Coding sequence (CDS) from alignment at sc0000606_pilon:62273..63317+

>XLOC_018010 ID=XLOC_018010|Name=XLOC_018010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=756bp|location=Sequence derived from alignment at sc0000606_pilon:62273..63317+ (Clytia hemisphaerica_ch_hm2_pilon)
AGATGGCTCCGATATTCAATCGATCCAGACGTAGTAAAAACTCAAGATAC
CGTTTACGTCATCGGTCGAATAGCAAGTTCGAATCCTATTGGAAAATATC
TGGCatggaactttgctaatgaaaACTGGAACAAAATCATGGAAATAGAT
GGCTCCGATATTCAATCGATCCAGACGTAGTAAAAACTCAAGATACCGTT
TACGTCATCGGTCGAATAGCAAGTTCGAATCCTATTGGAAAATATCTGGC
atggaactttgctaatgaaaACTGGAACAAAATCATGGAAATagctaaag
aaaacaattttcacGTCGCGTACATAACTTCGAGACTAACCAGTCAATTC
ACCACTCAATATGATCTGGAAATGagctaaagaaaacaattttcacGTCG
CGTACATAACTTCGAGACTAACCAGTCAATTCACCACTCAATATGATCTG
GAAATGGCGGAGGAAATGTGGAGAAGATATCCGGATGCCGGAACCGGTGC
TAATGCACGTCTCCAAGGCATTGAAAAGATCAAGGGAAACATTTATTGGC
TTTCTCAAAATTATGGAACCCTTCAGGCTTGGTTGAAGAAAAATACAATG
CAATGAGCGGAGGAAATGTGGAGAAGATATCCGGATGCCGGAACCGGTGC
TAATGCACGTCTCCAAGGCATTGAAAAGATCAAGGGAAACATTTATTGGC
TTTCTCAAAATTATGGAACCCTTCAGGCTTGGTTGAAGAAAAATACAATG
CAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_018010XLOC_018010-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000606_pilongenomesc0000606_pilon:62273..63317 +
Properties
Property NameValue
Aaloc229-378:896
Aaloc148-228:418
Aaloc1-144:1