|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3320927..3325441+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_018004 ID=XLOC_018004|Name=XLOC_018004|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4515bp|location=Sequence derived from alignment at sc0000001_pilon:3320927..3325441+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTTGTTGAAGAGTCAATCGAAAAACTAATTAAGGACGGTCGCATCAA
GCAAGTAAAAGAAGCTCCTTTTTGTGTGAATCCTTTGACTGTagcaaaaa
agaatgaaaaattacGACTTGTTATTGATTTGAGGCACATCAACTCTTtt
ataacctgataacagatgttcataattttcttacgcgcacggtaaacctc
taaaggcacttgaaaattatacatctgaggaaaatagtcctcccgcggaa
aattctacaacaagaatcttgttgtgcgccgaaaatataaaaactgatac
ggcgccctattcataaacacaatcacgcaactttgttgtcattcctagtc
cttttagacgaacgcggtccttacgatttcgagattgcatattcgtcaga
ttgtttgttttcacacatccctttagagcttcagcgtggtgtgcagaaaa
cattcacaatctgatctcaggttactcTTTTATCGATCCACCGAAATTTA
AATATGAGGATTTGAAGACTGCTGCAGAAGTTTTTGAGAAAGAGgatttt
ttaataacttttgacTTGACAAGTGGTTATCATCACGTACCGATTAATGA
GGACTTTCAGAGTTTTCTCGGTTTCGCGTGGAGCTTCAAAGGtgtaacaa
aatattttgttttttgtgtccTGCCTTTTGGATTAAATATTGCCTGCtgg
atttttacaaagctcatgCGTCAGCTAGTAAAGAGATGGCGCCGTCTTGG
GATCAGATGTGTTATGTACTTAGATGACGGTATAGcaggtgagaaaaatt
ttgacaaagcTATTTCCAACCGAAGCATTATCCTTCGTGATTTATGGGCC
GCAGGTCTTactattaattttcaaaaatccagtcTCAGGCCAGAACAAAG
AAAATCGTGGCTAGGATTTATCATAGACACAACAAAAATGACATTTACAG
TTCCTGAAGTAAAATTAGAGCGTCTCAATTCCGATATAATCTTTACATTA
CAAGAAGGTTGTTCATcttccagaaaaatttcaaaaatagcaGGTCAAAT
TATATCCATGTCTGGTTCTATTGGTCCACCTGCTTATCTATTCACGAAAC
AAATGTATAAGTTTGTTGAGTCTAATGATACTTGGGATAAAATTCATCTT
CTACCTTATGCCGTTGAGCATGAACTgaacttttggaaaaataatttatc
aaaaactaaatcattccgtatcaaaaccaaacccgaaatcacaaaaatcG
TTTTTTCTGACGCCAGTGAAACTGGTTATGGAGGATATACAgttgaaaaa
ttgggaaaaattatCGCAAAAGGAAGCTTCAACGAATTAGAAAGTAAAAC
TAGTTCCACCTTTCGAGAATTGCTCgctattaaaaatgttttggaGTCTC
TTACAGAATTCGTTAAAAATGAAACTATAGAATGGTTCACAGACAATGAA
AACTCTTGCAGAATCATCAAATCCGGTAGCACAAAACAACATCTTCAAAA
CTTAGCGatcgagatattcaacttttgtGTCATAAATAATACAACTATTT
TTCCTACTTGGATCCCTAGGGACGAAAACTGTGTTTCAGATAGGATCTCG
AAATCCATCGATACAGACAATTGGTCTATAGACATGGAAAGTTTTAACTA
TATACTAAGTCAATTCGGAGTTATTACAGTGGATAGGTTTGCAGATAACC
TCAATGCAAAAGTGGAGCGATTCAATTCAAGAGAATTTTGTCCCGGATCA
TCCGGAGTTAACGCTTTTCTTATCACTGGGGAAACAATGAAATTAATTGG
CTTTGTCCACCAGTACATTTGATTGGAAGAACTATCTCTCATTTAAAAAA
CTGCCAAGGAAAAGGCATTCTTTTTGTACCTTTATGGCCGTCTGCATACT
ATTGGCCATTGCTCACTTCAAATGGGAAAGAATTTAAACGTTTTGTACAA
CGCTTTTTAGTTTTAGATCCTTTTTTCATAAACTATTCAAAGTTACGAAa
gttaattgtatttttgatGGGTTTGCAAATTTTTATTCTCTTGCACTGTA
TATTGATTTTACAACATAACATTCTTAAGAAATCTCGTATGCTCTTGCAA
AATGCTGTTTTTATATCCTTTTTGATGCAATTTCAAGTGATCATATCATT
GTTGTATATGAGATCAAATGCATGAAACTGTTGTCTAGATGACTATGTAT
CAATGAACTGAAAAAcgttttatttctatttttttcacgcaaaaattaat
taacaATCATGATTTGACGACGACACAAGCTGTGGTATCAATGCTTTGTT
GCAATACCAATTATGGTATGAATGCTTTGTCGCAATACCAATTATGGTAT
CAATGCTTTGTTGCAATACCAATTATGGTATCAATGCTTTGTTGCAATAC
CAATTACGGTATCAATGCTTTGTTGCAATACCAACTATGCTATCGATGTT
TTGTTGCAATTTGAATTATGGTATCAATGCTTTGTGCAATACCAACTGTA
ATATCAATGCTCTGTTACAATATCAATTATGGTATCAATGCTCTGTTGCA
ATATCAATTATGGTATCAATGCTTTGTTGCAATACCGACTATGGTATCAA
TGCTTTGTTGCAATACCACATTATCTACAGGTAtaagagttatttttaaa
acttttttcatccttattttctTAAGGCATCCCCGAAGAACCCTCACTAG
TGGAAAGGATTGAAGGCATCAAAGACGAAAGACTTAGAGAAAAGGCAACT
ACCCTTCCAGAACTTCTCGATGCTGCCTACGCAAAATCGACCCTCAACAA
GTATAAGTCTGGTTGGAAAAAGTGGAAACAGTGGACCGAAAATTCCAGCG
AAATATCCCACCTCCCCGCTGACCCCTTTTTTGTCGCTATCTATCTCAAC
GACCTGACATCAAACAACGCAACAGAGGGAGCTTTAACAACAGCAATCCT
AGGGATCAGATGGGGCCATCAATCATCTGGTTTTTACTCTCCCACAGGAA
GTCCTTTAGTCAAACTGGCATTCGAGGGTGGCAAACGACTAATTTCGTCC
AAAGAtggaaatccaaaaagaatGCGTAAAGAGCCTCTCACAAcagactt
aagggctctgaccatagtccaaaagttgattttggtatttgaacataaaa
gttatatttcaggttccttaacacttttaacaaagaattgcctttacaaa
ttgttttttaatcgagtcccttaagagtaattaagaatttaattgcaaaa
atgacgttatgaactttaaaaatatgttaataatatgttgcatcaccctc
ttttataaaaagtgcttagttttaatgggtaattaacttttttgtttcaa
aatttctgtacactgtccgcaaagaattgaactattttaaattttgcgga
aaatttttctaaaaagatgtgtcaaaagttatgactgtttttttaagcaa
aatccagatgaaaaattgatgaaaaaccactattttgaagatttcgagac
aaagaagcatttacaaaatttttccgcaaaaatttttattgttcggtaaa
agatacaccatgtaatgcgaaaaaattttcaaaatgtattttcttcgccg
aaactaagctcttcaaagttgaaatactcttcctcgcaaaagtcttcatt
ttcttcttcatcaaattttttcaatgcaatttttgaattttcagattcag
gattagtttttctaacagaaaatgtataacatgccatagttttgttggtt
acatcagtcagaaaacacattttaaacacggcaattatgaaaaattcact
atggtcagagcccttaatcaAAGCCATTATTGATAAGTTTATTTCGACAG
AAAATCTTTTAGACATGCGATTCATTCTGATGACTATTCTTGGcttttca
ggattttttcgTATCAGCGAAATGCTACAGATACAAATCCAACACATTAC
TTTTTGCCAATCAGGGGTGAAAATCTTTTTACCAAAGTCAAAAACAGACC
AAATTAGAGAGGGGAATACCGTCTTCATCAGTGCGACCAAAGGTTCTTAT
TGCCCTATTTATTGGCTACAGAAATATATCAATCTTGCTAAATTATCCCG
ACCAAACGATTATCTGTTCTGCCGACTCTTTAAGTGTAAGATTGGTCATT
CGGCCCATGGAAACCTACCAATTTCATACACCACAGCCAGAGACTCATTG
AAAGGCCACTTAACCGGTATTGTTGAAGACAAGGCTAAGTATGGCTTGCA
TTCTCTTCGCTCTGGGGGTGCAACCGAAGCAGCTAACAACGGTGTGTCAG
ATAGAATGATCTCAAAACATGGTCGCTGGTCGTCCAATACTAGTCGTGAT
ACGTACATTAAAGACAAACCACTGAACAGATTTAAAGTTTCAAGACAATT
AggaatttgaaaatgatgtttAAAAACTCCGCTGCTTGTCTTTTCTTCCT
CGTGTTCACTGCAAGATCTATCCAATAAACTATGCCTTATGTGTCTATTA
TTGTTTGAGATTTGA Coding sequence (CDS) from alignment at sc0000001_pilon:3320927..3325441+ >XLOC_018004 ID=XLOC_018004|Name=XLOC_018004|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2046bp|location=Sequence derived from alignment at sc0000001_pilon:3320927..3325441+ (Clytia hemisphaerica_ch_hm2_pilon)
GCTTTTGTTGAAGAGTCAATCGAAAAACTAATTAAGGACGGTCGCATCAA
GCAAGTAAAAGAAGCTCCTTTTTGTGTGAATCCTTTGACTGTagcaaaaa
agaatgaaaaattacGACTTGTTATTGATTTGAGGCACAGCTTTTGTTGA
AGAGTCAATCGAAAAACTAATTAAGGACGGTCGCATCAAGCAAGTAAAAG
AAGCTCCTTTTTGTGTGAATCCTTTGACTGTagcaaaaaagaatgaaaaa
ttacGACTTGTTATTGATTTGAGGCACAgttactcTTTTATCGATCCACC
GAAATTTAAATATGAGGATTTGAAGACTGCTGCAGAAGTTTTTGAGAAAG
AGgattttttaataacttttgacTTGACAAGTGGTTATCATCACGTACCG
ATTAATGAGGACTTTCAGAGTTTTCTCGGTTTCGCGTGGAGCTTCAAAGG
tgtaacaaaatattttgttttttgtgtccTGCCTTTTGGATTAAATATTG
CCTGCtggatttttacaaagctcatgCGTCAGCTAGTAAAGAGATGGCGC
CGTCTTGGGATCAGATGTGTTATGTACTTAGATGACGGTATAGcaggtga
gaaaaattttgacaaagcTATTTCCAACCGAAGCATTATCCTTCGTGATT
TATGGGCCGCAGGTCTTactattaattttcaaaaatccagtcTCAGGCCA
GAACAAAGAAAATCGTGGCTAGGATTTATCATAGACACAACAAAAATGAC
ATTTACAGTTCCTGAAGTAAAATTAGAGCGTCTCAATTCCGATATAATCT
TTACATTACAAGAAGGTTGTTCATcttccagaaaaatttcaaaaatagca
GGTCAAATTATATCCATGTCTGGTTCTATTGGTCCACCTGCTTATCTATT
CACGAAACAAATGTATAAGTTTGTTGAGTCTAATGATACTTGGGATAAAA
TTCATCTTCTACCTTATGCCGTTGAGCATGAACTgaacttttggaaaaat
aatttatcaaaaactaaatcattccgtatcaaaaccaaacccgaaatcac
aaaaatcGTTTTTTCTGACGCCAGTGAAACTGGTTATGGAGGATATACAg
ttactcTTTTATCGATCCACCGAAATTTAAATATGAGGATTTGAAGACTG
CTGCAGAAGTTTTTGAGAAAGAGgattttttaataacttttgacTTGACA
AGTGGTTATCATCACGTACCGATTAATGAGGACTTTCAGAGTTTTCTCGG
TTTCGCGTGGAGCTTCAAAGGtgtaacaaaatattttgttttttgtgtcc
TGCCTTTTGGATTAAATATTGCCTGCtggatttttacaaagctcatgCGT
CAGCTAGTAAAGAGATGGCGCCGTCTTGGGATCAGATGTGTTATGTACTT
AGATGACGGTATAGcaggtgagaaaaattttgacaaagcTATTTCCAACC
GAAGCATTATCCTTCGTGATTTATGGGCCGCAGGTCTTactattaatttt
caaaaatccagtcTCAGGCCAGAACAAAGAAAATCGTGGCTAGGATTTAT
CATAGACACAACAAAAATGACATTTACAGTTCCTGAAGTAAAATTAGAGC
GTCTCAATTCCGATATAATCTTTACATTACAAGAAGGTTGTTCATcttcc
agaaaaatttcaaaaatagcaGGTCAAATTATATCCATGTCTGGTTCTAT
TGGTCCACCTGCTTATCTATTCACGAAACAAATGTATAAGTTTGTTGAGT
CTAATGATACTTGGGATAAAATTCATCTTCTACCTTATGCCGTTGAGCAT
GAACTgaacttttggaaaaataatttatcaaaaactaaatcattccgtat
caaaaccaaacccgaaatcacaaaaatcGTTTTTTCTGACGCCAGTGAAA
CTGGTTATGGAGGATATACATGTTCACTGCAAGATCTATCCAATAAACTA
TGCCTTATGTGTCTATTATTGTTTGAGATTTGATGTTCACTGCAAGATCT
ATCCAATAAACTATGCCTTATGTGTCTATTATTGTTTGAGATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3320927..3325441 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-1023:4453 |
| Aaloc | 142-960:473 |
| Aaloc | 1-138:1 |
|
