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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3393762..3397033+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017995 ID=XLOC_017995|Name=XLOC_017995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3272bp|location=Sequence derived from alignment at sc0000001_pilon:3393762..3397033+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCACACGACTGAAAGGTTGTTGTTCAGTTCTGTTCTGTCTGTTTCGGA
AGAGAacataaaagttttattttccaCACTTCACTTTTTAGATTCTATTC
GAGGTGTGCAGATCTTTGAAGACGGCCCATCATTACAAATTCTTCAATTC
GAAGCCAAACAATGGGAAAAGAATAATGATATTATCACACAGAGTCATTC
TCTGGTCAAATTTACGACGAAAGCATTGAAGGATTGCGCCGGCTTGTATC
TGATCTTGAAGAGTTGCGCTGAGGGTAGAAGGTTGGTTGATTATAGATTC
ATCCATTTAAATCGTTATTTTATTCCATAGATAATTTCGCTAGAATTTGG
GTGtcgtgaaaatttttttgcgtatTATATAGTAAAGGAATCCTCAAATT
AATCTGAAAATCAGGTTTTCCTCCAGCACGTTTATTATAATTTAACGCAC
TCAACTTATGTAGACAAGGaatatttccaaatttatttACCTAGGATGAA
TAATCAAACAGTTTACCTAATAGTTCATTTCTTCTTACAGGACTGTATCA
AAGATCGCTACCATTCAAGAGATTACAAGTAACGTTTTAGACAACCCTTA
CAAAATGCCCAAAGACATCCTCATGGCGTTCTTCCAAAACTTCATACGGA
AAGCATCGTCCGCGTCGCCCAAAAAGAACGAAAACCGTCAGAAAACACAA
CGGCAGACTAGCCAACAGCAACATCAACACACAGACTACGAAAATATCAA
CATTGAACAACATTCATTTCTTAAGCATGTCGAGAACACTGactcacaac
aacaacaaaccaTCCTGTCCGTATTATGGGTGGGCTGTCTTCCGTATCTT
TTCCCGGATGAGGAAATCCCGGTTGCCGTTGTCACAACCTCCTTAAACAT
TTTCCTGTTTCGGGTTTTCCACCCAGCTGATGACGAACTGGACTCCAAGG
AAACCCCGACTTTCAATACAGTAGCCTCACTCGAGGAAGCTATGCATTGT
TTCTACAGTTTCCCTTTAAAATCATTGCGCGAAGTTGTCGTTGGGTTGTT
CGATCAAGGATTGCGATTAGAAGTCAGTGATGAAGGACCTCGAGGAACTT
TTGTGCTCTTGACAAGAGATGCGAACAAAACAGGGCAATTTTTAGATGTC
CTCACAAGCCTTGTATCCATCAAAACAGGAGTTCAAGAAGAATCAAATGC
ACCAGTAGAGAACCAAGTCAGTATCGTTTATCCTgacgaaagtaaaatca
acgCTCTGAAAGCACAACTCCAGGAACAAGAAATCTCTCCTCTCGGCAGT
CGTGAAAATCTTATCTCTTACTGCATTGTGTATCAGATTCGTGAAAACAA
CGCACGAAAAGacgcttatgatgacgtcacttCGGTCTACCTGAGGAGCA
TGATTTTAACCAACCTGCGAATCTTTCTATGCGATGAAGATTATGTACAT
TGGCCGCTCCCTTCGTACATTCATTCCGCCCCTTTCACGCCACAGTGGGT
GGTTGATGACGTCAATAAGGCGGAAAGTGTGATTGGTGTTGATTTGTGGG
AAGAGCAGAAGCATAGTCTTAGAGGTAAGgatgtttttttcgaaataatG
ATTatctatttgaaaaaagttttgtagCTTAggctttttgaagtttttat
aagctTTATTCTGTAGTGCGAGAGATCGAACCGGGCATTACATCATTATC
ATCAGCCTGACCTCaaataaaaaccttttaagaaaatggttatttcttta
ctttttagGTTCTTATGGACTTTCCTTGACGTTCGAGGGAAATACCCAAC
AGACACCATCATCAGATCTCAAAGGTTCCACTGCGCATGTGTGGAACATG
ATCTTTCAATCATTGTCAGAGCGTGAACAACTCGTTCGCTCGCTTGCTTC
GATATGGAAAAACAGTTTTGGGCAAGACTTGAAAGTTACTAAATCGAATG
TTCTTGCTAGTACGAAGTCTAGCCTTCCTCTCATCAAAGGACACGCCAAG
AAACCGTCCGGAAATATCGCTATCCCGTCTCACCAATCCATCGATTCGCC
CGAAATGTTCACGAGCATCGATCGCGCCCGTTTGAATGAATTATTCCGAA
ACAAGATCGCCCAAGGTGATGACGTTACGACGACAGGTGTTCAATACGTA
GCGTGCGTCGGCTGCAAACCGTACAAATACCCCGATATCGAAATCCCCGT
CGCAGTGCTGTTAGGGAAGTATAAAATCTATCTAATATGTGGACCAAAGA
ATCGTAAATTCTTACTTGCCAATACTCAGTTTGAAGACCAAGAATCGTCA
ACTTCGTTATATTTGACCTCGATTGAGATCAGTGACCTTCAACAGGTCGT
TGTTGGACTTTTCGATCAATGTCTAAGACTGGAGACGGGTTACCCAGAAT
GCACTTTTGTGTTGGTGACACGTGACTTTGATCGAACTAATGAGCTGATA
CAACGTTTAAGTCAAGCCATTCTCGCTTTACCGAAACAAATGAAGGTCTT
GGAAAATGATTCAACGCTAAGCGAAAGCCGTGAAACCACCGCAGAGATTT
TTCAACTCTACAAAAGTGAAGACGAATCGGGGACAAATTATTACCCGAAA
TCCGAATTCATTCATCCGAATTCCAGTATCAAATTTGTGTACCCGAGCGA
CGATTTACTAGAGAAATTACGTGTGAAAATCCAAGAGTATATTCAACTTG
TAGATCTCTTTCCAACGGAAAACGATTTCGGAATTTTACTTTACGCCTTG
GTTttccaaaaacaaaatgaacttGAGACACCTTTCACTTTTGTAATAAG
CGAGACATTTTTATGTCTAATCATGGAAGACCACGTGGGTTATCCTCTTC
CGCTGTTTGTGAAAGAATTACCGGATCGCTCACAGTACGAATTATCGGAT
GTCCGGCTTATTTCATCGCTTGTCCGGGTTGAATTCAGTGATTTTCATTC
CGGTGAATTAAGTTTGATTTTTAACGCATGCGCTGTAGATCCATCGAAAT
ATGGAGATCGCTTCAAAATGGGAAGCGTTGAAGATGACTATTCTTACGTC
ACCGATGTTAACGCGATCCCGAATGCCGGTACCGAGACATCCAAAGAAAA
CGCGGGAAATGTTCCTGGTGTAGAAAGTAACGCTGAGGAAGATAACATTT
TGAGATGGCAATTGAGAGCGCACTCTTACGCGGAGAGGGAAAAGATTTTT
GACATGATTTCGAAAATGTGGACAAATATTTTCACTGGTAAATCCCTACC
TGTAATACGCGTCAAATCTTGA Coding sequence (CDS) from alignment at sc0000001_pilon:3393762..3397033+ >XLOC_017995 ID=XLOC_017995|Name=XLOC_017995|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5658bp|location=Sequence derived from alignment at sc0000001_pilon:3393762..3397033+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCACACGACTGAAAGGTTGTTGTTCAGTTCTGTTCTGTCTGTTTCGGA
AGAGAacataaaagttttattttccaCACTTCACTTTTTAGATTCTATTC
GAGGTGTGCAGATCTTTGAAGACGGCCCATCATTACAAATTCTTCAATTC
GAAGCCAAACAATGGGAAAAGAATAATGATATTATCACACAGAGTCATTC
TCTGGTCAAATTTACGACGAAAGCATTGAAGGATTGCGCCGGCTTGTATC
TGATCTTGAAGAGTTGCGCTGAGGGTAGAAGCAGCACACGACTGAAAGGT
TGTTGTTCAGTTCTGTTCTGTCTGTTTCGGAAGAGAacataaaagtttta
ttttccaCACTTCACTTTTTAGATTCTATTCGAGGTGTGCAGATCTTTGA
AGACGGCCCATCATTACAAATTCTTCAATTCGAAGCCAAACAATGGGAAA
AGAATAATGATATTATCACACAGAGTCATTCTCTGGTCAAATTTACGACG
AAAGCATTGAAGGATTGCGCCGGCTTGTATCTGATCTTGAAGAGTTGCGC
TGAGGGTAGAAGGACTGTATCAAAGATCGCTACCATTCAAGAGATTACAA
GTAACGTTTTAGACAACCCTTACAAAATGCCCAAAGACATCCTCATGGCG
TTCTTCCAAAACTTCATACGGAAAGCATCGTCCGCGTCGCCCAAAAAGAA
CGAAAACCGTCAGAAAACACAACGGCAGACTAGCCAACAGCAACATCAAC
ACACAGACTACGAAAATATCAACATTGAACAACATTCATTTCTTAAGCAT
GTCGAGAACACTGactcacaacaacaacaaaccaTCCTGTCCGTATTATG
GGTGGGCTGTCTTCCGTATCTTTTCCCGGATGAGGAAATCCCGGTTGCCG
TTGTCACAACCTCCTTAAACATTTTCCTGTTTCGGGTTTTCCACCCAGCT
GATGACGAACTGGACTCCAAGGAAACCCCGACTTTCAATACAGTAGCCTC
ACTCGAGGAAGCTATGCATTGTTTCTACAGTTTCCCTTTAAAATCATTGC
GCGAAGTTGTCGTTGGGTTGTTCGATCAAGGATTGCGATTAGAAGTCAGT
GATGAAGGACCTCGAGGAACTTTTGTGCTCTTGACAAGAGATGCGAACAA
AACAGGGCAATTTTTAGATGTCCTCACAAGCCTTGTATCCATCAAAACAG
GAGTTCAAGAAGAATCAAATGCACCAGTAGAGAACCAAGTCAGTATCGTT
TATCCTgacgaaagtaaaatcaacgCTCTGAAAGCACAACTCCAGGAACA
AGAAATCTCTCCTCTCGGCAGTCGTGAAAATCTTATCTCTTACTGCATTG
TGTATCAGATTCGTGAAAACAACGCACGAAAAGacgcttatgatgacgtc
acttCGGTCTACCTGAGGAGCATGATTTTAACCAACCTGCGAATCTTTCT
ATGCGATGAAGATTATGTACATTGGCCGCTCCCTTCGTACATTCATTCCG
CCCCTTTCACGCCACAGTGGGTGGTTGATGACGTCAATAAGGCGGAAAGT
GTGATTGGTGTTGATTTGTGGGAAGAGCAGAAGCATAGTCTTAGAGGACT
GTATCAAAGATCGCTACCATTCAAGAGATTACAAGTAACGTTTTAGACAA
CCCTTACAAAATGCCCAAAGACATCCTCATGGCGTTCTTCCAAAACTTCA
TACGGAAAGCATCGTCCGCGTCGCCCAAAAAGAACGAAAACCGTCAGAAA
ACACAACGGCAGACTAGCCAACAGCAACATCAACACACAGACTACGAAAA
TATCAACATTGAACAACATTCATTTCTTAAGCATGTCGAGAACACTGact
cacaacaacaacaaaccaTCCTGTCCGTATTATGGGTGGGCTGTCTTCCG
TATCTTTTCCCGGATGAGGAAATCCCGGTTGCCGTTGTCACAACCTCCTT
AAACATTTTCCTGTTTCGGGTTTTCCACCCAGCTGATGACGAACTGGACT
CCAAGGAAACCCCGACTTTCAATACAGTAGCCTCACTCGAGGAAGCTATG
CATTGTTTCTACAGTTTCCCTTTAAAATCATTGCGCGAAGTTGTCGTTGG
GTTGTTCGATCAAGGATTGCGATTAGAAGTCAGTGATGAAGGACCTCGAG
GAACTTTTGTGCTCTTGACAAGAGATGCGAACAAAACAGGGCAATTTTTA
GATGTCCTCACAAGCCTTGTATCCATCAAAACAGGAGTTCAAGAAGAATC
AAATGCACCAGTAGAGAACCAAGTCAGTATCGTTTATCCTgacgaaagta
aaatcaacgCTCTGAAAGCACAACTCCAGGAACAAGAAATCTCTCCTCTC
GGCAGTCGTGAAAATCTTATCTCTTACTGCATTGTGTATCAGATTCGTGA
AAACAACGCACGAAAAGacgcttatgatgacgtcacttCGGTCTACCTGA
GGAGCATGATTTTAACCAACCTGCGAATCTTTCTATGCGATGAAGATTAT
GTACATTGGCCGCTCCCTTCGTACATTCATTCCGCCCCTTTCACGCCACA
GTGGGTGGTTGATGACGTCAATAAGGCGGAAAGTGTGATTGGTGTTGATT
TGTGGGAAGAGCAGAAGCATAGTCTTAGAGGTTCTTATGGACTTTCCTTG
ACGTTCGAGGGAAATACCCAACAGACACCATCATCAGATCTCAAAGGTTC
CACTGCGCATGTGTGGAACATGATCTTTCAATCATTGTCAGAGCGTGAAC
AACTCGTTCGCTCGCTTGCTTCGATATGGAAAAACAGTTTTGGGCAAGAC
TTGAAAGTTACTAAATCGAATGTTCTTGCTAGTACGAAGTCTAGCCTTCC
TCTCATCAAAGGACACGCCAAGAAACCGTCCGGAAATATCGCTATCCCGT
CTCACCAATCCATCGATTCGCCCGAAATGTTCACGAGCATCGATCGCGCC
CGTTTGAATGAATTATTCCGAAACAAGATCGCCCAAGGTGATGACGTTAC
GACGACAGGTGTTCAATACGTAGCGTGCGTCGGCTGCAAACCGTACAAAT
ACCCCGATATCGAAATCCCCGTCGCAGTGCTGTTAGGGAAGTATAAAATC
TATCTAATATGTGGACCAAAGAATCGTAAATTCTTACTTGCCAATACTCA
GTTTGAAGACCAAGAATCGTCAACTTCGTTATATTTGACCTCGATTGAGA
TCAGTGACCTTCAACAGGTCGTTGTTGGACTTTTCGATCAATGTCTAAGA
CTGGAGACGGGTTACCCAGAATGCACTTTTGTGTTGGTGACACGTGACTT
TGATCGAACTAATGAGCTGATACAACGTTTAAGTCAAGCCATTCTCGCTT
TACCGAAACAAATGAAGGTCTTGGAAAATGATTCAACGCTAAGCGAAAGC
CGTGAAACCACCGCAGAGATTTTTCAACTCTACAAAAGTGAAGACGAATC
GGGGACAAATTATTACCCGAAATCCGAATTCATTCATCCGAATTCCAGTA
TCAAATTTGTGTACCCGAGCGACGATTTACTAGAGAAATTACGTGTGAAA
ATCCAAGAGTATATTCAACTTGTAGATCTCTTTCCAACGGAAAACGATTT
CGGAATTTTACTTTACGCCTTGGTTttccaaaaacaaaatgaacttGAGA
CACCTTTCACTTTTGTAATAAGCGAGACATTTTTATGTCTAATCATGGAA
GACCACGTGGGTTATCCTCTTCCGCTGTTTGTGAAAGAATTACCGGATCG
CTCACAGTACGAATTATCGGATGTCCGGCTTATTTCATCGCTTGTCCGGG
TTGAATTCAGTGATTTTCATTCCGGTGAATTAAGTTTGATTTTTAACGCA
TGCGCTGTAGATCCATCGAAATATGGAGATCGCTTCAAAATGGGAAGCGT
TGAAGATGACTATTCTTACGTCACCGATGTTAACGCGATCCCGAATGCCG
GTACCGAGACATCCAAAGAAAACGCGGGAAATGTTCCTGGTGTAGAAAGT
AACGCTGAGGAAGATAACATTTTGAGATGGCAATTGAGAGCGCACTCTTA
CGCGGAGAGGGAAAAGATTTTTGACATGATTTCGAAAATGTGGACAAATA
TTTTCACTGGTAAATCCCTACCTGTAATACGCGTCAAATCTTGAGTTCTT
ATGGACTTTCCTTGACGTTCGAGGGAAATACCCAACAGACACCATCATCA
GATCTCAAAGGTTCCACTGCGCATGTGTGGAACATGATCTTTCAATCATT
GTCAGAGCGTGAACAACTCGTTCGCTCGCTTGCTTCGATATGGAAAAACA
GTTTTGGGCAAGACTTGAAAGTTACTAAATCGAATGTTCTTGCTAGTACG
AAGTCTAGCCTTCCTCTCATCAAAGGACACGCCAAGAAACCGTCCGGAAA
TATCGCTATCCCGTCTCACCAATCCATCGATTCGCCCGAAATGTTCACGA
GCATCGATCGCGCCCGTTTGAATGAATTATTCCGAAACAAGATCGCCCAA
GGTGATGACGTTACGACGACAGGTGTTCAATACGTAGCGTGCGTCGGCTG
CAAACCGTACAAATACCCCGATATCGAAATCCCCGTCGCAGTGCTGTTAG
GGAAGTATAAAATCTATCTAATATGTGGACCAAAGAATCGTAAATTCTTA
CTTGCCAATACTCAGTTTGAAGACCAAGAATCGTCAACTTCGTTATATTT
GACCTCGATTGAGATCAGTGACCTTCAACAGGTCGTTGTTGGACTTTTCG
ATCAATGTCTAAGACTGGAGACGGGTTACCCAGAATGCACTTTTGTGTTG
GTGACACGTGACTTTGATCGAACTAATGAGCTGATACAACGTTTAAGTCA
AGCCATTCTCGCTTTACCGAAACAAATGAAGGTCTTGGAAAATGATTCAA
CGCTAAGCGAAAGCCGTGAAACCACCGCAGAGATTTTTCAACTCTACAAA
AGTGAAGACGAATCGGGGACAAATTATTACCCGAAATCCGAATTCATTCA
TCCGAATTCCAGTATCAAATTTGTGTACCCGAGCGACGATTTACTAGAGA
AATTACGTGTGAAAATCCAAGAGTATATTCAACTTGTAGATCTCTTTCCA
ACGGAAAACGATTTCGGAATTTTACTTTACGCCTTGGTTttccaaaaaca
aaatgaacttGAGACACCTTTCACTTTTGTAATAAGCGAGACATTTTTAT
GTCTAATCATGGAAGACCACGTGGGTTATCCTCTTCCGCTGTTTGTGAAA
GAATTACCGGATCGCTCACAGTACGAATTATCGGATGTCCGGCTTATTTC
ATCGCTTGTCCGGGTTGAATTCAGTGATTTTCATTCCGGTGAATTAAGTT
TGATTTTTAACGCATGCGCTGTAGATCCATCGAAATATGGAGATCGCTTC
AAAATGGGAAGCGTTGAAGATGACTATTCTTACGTCACCGATGTTAACGC
GATCCCGAATGCCGGTACCGAGACATCCAAAGAAAACGCGGGAAATGTTC
CTGGTGTAGAAAGTAACGCTGAGGAAGATAACATTTTGAGATGGCAATTG
AGAGCGCACTCTTACGCGGAGAGGGAAAAGATTTTTGACATGATTTCGAA
AATGTGGACAAATATTTTCACTGGTAAATCCCTACCTGTAATACGCGTCA
AATCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3393762..3397033 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1318-2829:1761 |
| Aaloc | 283-1314:542 |
| Aaloc | 1-279:1 |
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