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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:178217..179681+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017901 ID=XLOC_017901|Name=XLOC_017901|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1465bp|location=Sequence derived from alignment at sc0000001_pilon:178217..179681+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTGGGTTGACTAGGAAAGTTTTGGATCTGAAATTTTACCTTAACATTAC
CTCAAGTTCTGAAATTAGAAGTAAGTCTCCTTATGTAGAAGAGAATGAAA
GTTTAAAACATAGgggtttaaaatttcatttaatttcaggacttgaaaaa
tttcatgtctgGCTGTATTCACTGctgtttcttatttttcatttcagata
tATCAGTTACTAATCacaacaaaataaaccaaaatttaTATAAAGTGATA
TCACAAATGGAATCGTTAGATTTGTTaccaaatgaaattttgaaaatggt
attATGCTCTTTGGATTTGAAAAGTGCCCAAAAATTTTCTCTCACTTCAA
AGAGGATAAACAAACTGACATTGTCAAAACTTTGGTCAAAACCAAGATAT
ACAAACGATTCCAAAAATCTTGAGTTTCTTCACAAGATTTCTCGCTTTCC
GATTCGTGAGCTGCATACTCGAGATTTTAAATGCAATTGGCTCGAAATGG
TTGCTTTGGTACCGCAACTCCAGTTTCTTCATATCGATACATACTACGGC
AAATTTTACAAACCTGAAAAATCAATGTTACCATTTCTAAAAGTCCCTGT
TATTATACATACAAATACGTTTGGTATAAAAAGTGAGCaagattttgata
aatttttggCAATCCTTAGTTCAATTGAAGTGGAGGAGCTGATTATTGAT
CATGGCTCCTATTTTTACGACAGTAAAGACCGACAACGTGCCCTTTCCAT
TGAGGAATTCAAATTGCTTTCTGAAAGGGTGCGCATATCTGAATTACATG
TCATTAGTCTTGATTTAAATGAAGAGAATGTCAAAGATTTCATGAAAGTT
TTGGCTTCCATCAAAAACTGCACAGTTATCATGGATAATTTACATCCATC
GTATTTGTTTACTGTCAAAGACCTGGAATCGATGGTTAAGCTTGATATTA
AAATCATATTAATTGATACCAGTTGTTTAGCAGTTTCCACTAACCCAGAA
CTTCTTAATTTTGTCAAAGTcatgagaaaaatgaaatatcttaAAGAATT
TCGATTTTGCAATGAAGATTTTAGAGATGAGATTGTTCCTCCTCCTATGG
AACAACTGACTGATTTACCCTTCAAATCTATTGCAACTGATAATTTCCGA
GTTGAAGAGGGAAAAGTTGGAGATATCGTAAACATCTTATCTCAGATCAA
ATCGTTAAAGGAATTGAAAATTCGACCAGATCATCATACTGATTATAAGA
TGTCACCAAGTGATTTTGCTTTATTCAAGGATCTTCCTGTGACAATAACT
TTCCTTTGTTTGGAGGCATTAAATTTAACAAAGGAGAATGAAGTTGAGTT
TCGTCAAATtatgaaacagatgaaaatcACTAACATTCTGTGGTTCGACC
GCAATTTCGAGGAGCAAGGATTTGAGATTGACATAAAAATTGATGGTGTA
TACGAAACTATTTGA Coding sequence (CDS) from alignment at sc0000001_pilon:178217..179681+ >XLOC_017901 ID=XLOC_017901|Name=XLOC_017901|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2930bp|location=Sequence derived from alignment at sc0000001_pilon:178217..179681+ (Clytia hemisphaerica_ch_hm2_pilon)
CCTGGGTTGACTAGGAAAGTTTTGGATCTGAAATTTTACCTTAACATTAC
CTCAAGTTCTGAAATTAGAAGTAAGTCTCCTTATGTAGAAGAGAATGAAA
GTTTAAAACATAGgggtttaaaatttcatttaatttcaggacttgaaaaa
tttcatgtctgGCTGTATTCACTGctgtttcttatttttcatttcagata
tATCAGTTACTAATCacaacaaaataaaccaaaatttaTATAAAGTGATA
TCACAAATGGAATCGTTAGATTTGTTaccaaatgaaattttgaaaatggt
attATGCTCTTTGGATTTGAAAAGTGCCCAAAAATTTTCTCTCACTTCAA
AGAGGATAAACAAACTGACATTGTCAAAACTTTGGTCAAAACCAAGATAT
ACAAACGATTCCAAAAATCTTGAGTTTCTTCACAAGATTTCTCGCTTTCC
GATTCGTGAGCTGCATACTCGAGATTTTAAATGCAATTGGCTCGAAATGG
TTGCTTTGGTACCGCAACTCCAGTTTCTTCATATCGATACATACTACGGC
AAATTTTACAAACCTGAAAAATCAATGTTACCATTTCTAAAAGTCCCTGT
TATTATACATACAAATACGTTTGGTATAAAAAGTGAGCaagattttgata
aatttttggCAATCCTTAGTTCAATTGAAGTGGAGGAGCTGATTATTGAT
CATGGCTCCTATTTTTACGACAGTAAAGACCGACAACGTGCCCTTTCCAT
TGAGGAATTCAAATTGCTTTCTGAAAGGGTGCGCATATCTGAATTACATG
TCATTAGTCTTGATTTAAATGAAGAGAATGTCAAAGATTTCATGAAAGTT
TTGGCTTCCATCAAAAACTGCACAGTTATCATGGATAATTTACATCCATC
GTATTTGTTTACTGTCAAAGACCTGGAATCGATGGTTAAGCTTGATATTA
AAATCATATTAATTGATACCAGTTGTTTAGCAGTTTCCACTAACCCAGAA
CTTCTTAATTTTGTCAAAGTcatgagaaaaatgaaatatcttaAAGAATT
TCGATTTTGCAATGAAGATTTTAGAGATGAGATTGTTCCTCCTCCTATGG
AACAACTGACTGATTTACCCTTCAAATCTATTGCAACTGATAATTTCCGA
GTTGAAGAGGGAAAAGTTGGAGATATCGTAAACATCTTATCTCAGATCAA
ATCGTTAAAGGAATTGAAAATTCGACCAGATCATCATACTGATTATAAGA
TGTCACCAAGTGATTTTGCTTTATTCAAGGATCTTCCTGTGACAATAACT
TTCCTTTGTTTGGAGGCATTAAATTTAACAAAGGAGAATGAAGTTGAGTT
TCGTCAAATtatgaaacagatgaaaatcACTAACATTCTGTGGTTCGACC
GCAATTTCGAGGAGCAAGGATTTGAGATTGACATAAAAATTGATGGTGTA
TACGAAACTATTTGACCTGGGTTGACTAGGAAAGTTTTGGATCTGAAATT
TTACCTTAACATTACCTCAAGTTCTGAAATTAGAAGTAAGTCTCCTTATG
TAGAAGAGAATGAAAGTTTAAAACATAGgggtttaaaatttcatttaatt
tcaggacttgaaaaatttcatgtctgGCTGTATTCACTGctgtttcttat
ttttcatttcagatatATCAGTTACTAATCacaacaaaataaaccaaaat
ttaTATAAAGTGATATCACAAATGGAATCGTTAGATTTGTTaccaaatga
aattttgaaaatggtattATGCTCTTTGGATTTGAAAAGTGCCCAAAAAT
TTTCTCTCACTTCAAAGAGGATAAACAAACTGACATTGTCAAAACTTTGG
TCAAAACCAAGATATACAAACGATTCCAAAAATCTTGAGTTTCTTCACAA
GATTTCTCGCTTTCCGATTCGTGAGCTGCATACTCGAGATTTTAAATGCA
ATTGGCTCGAAATGGTTGCTTTGGTACCGCAACTCCAGTTTCTTCATATC
GATACATACTACGGCAAATTTTACAAACCTGAAAAATCAATGTTACCATT
TCTAAAAGTCCCTGTTATTATACATACAAATACGTTTGGTATAAAAAGTG
AGCaagattttgataaatttttggCAATCCTTAGTTCAATTGAAGTGGAG
GAGCTGATTATTGATCATGGCTCCTATTTTTACGACAGTAAAGACCGACA
ACGTGCCCTTTCCATTGAGGAATTCAAATTGCTTTCTGAAAGGGTGCGCA
TATCTGAATTACATGTCATTAGTCTTGATTTAAATGAAGAGAATGTCAAA
GATTTCATGAAAGTTTTGGCTTCCATCAAAAACTGCACAGTTATCATGGA
TAATTTACATCCATCGTATTTGTTTACTGTCAAAGACCTGGAATCGATGG
TTAAGCTTGATATTAAAATCATATTAATTGATACCAGTTGTTTAGCAGTT
TCCACTAACCCAGAACTTCTTAATTTTGTCAAAGTcatgagaaaaatgaa
atatcttaAAGAATTTCGATTTTGCAATGAAGATTTTAGAGATGAGATTG
TTCCTCCTCCTATGGAACAACTGACTGATTTACCCTTCAAATCTATTGCA
ACTGATAATTTCCGAGTTGAAGAGGGAAAAGTTGGAGATATCGTAAACAT
CTTATCTCAGATCAAATCGTTAAAGGAATTGAAAATTCGACCAGATCATC
ATACTGATTATAAGATGTCACCAAGTGATTTTGCTTTATTCAAGGATCTT
CCTGTGACAATAACTTTCCTTTGTTTGGAGGCATTAAATTTAACAAAGGA
GAATGAAGTTGAGTTTCGTCAAATtatgaaacagatgaaaatcACTAACA
TTCTGTGGTTCGACCGCAATTTCGAGGAGCAAGGATTTGAGATTGACATA
AAAATTGATGGTGTATACGAAACTATTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:178217..179681 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-1467:545 |
| Aaloc | 160-546:155 |
| Aaloc | 151-153:152 |
| Aaloc | 1-150:1 |
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