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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000454_pilon:151763..155386+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017831 ID=XLOC_017831|Name=XLOC_017831|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3624bp|location=Sequence derived from alignment at sc0000454_pilon:151763..155386+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtattttttcatATGTTGTGGTTACTTCTTCAGTTGGTTGCAAGCACC
AATACAAGCTTACCTGAGACCTGCTCTCTGGTTCCCTGGTCTACGCGCCA
TCCACCAGAAGAAAGAAAGGTGAGTGTTCATATTTATCACATAACTAATA
CTCTCTAGAATACATTCCGACCTTGTTTAATGTTTTGATTCGAACTCTAG
TTCTGAGGATTGCTTTTAGTTATagcattcattttttaatttagcAGCAA
GCCTTAGTAAAGGGGCAGTAGTTTTAAAAATAGCACTATTCACTATTCTG
TCAAGATAAACAACGTATATAGAGGATACTAAATCTAACCGTCCAGATTA
CTGATCTTTACCATCTTTGAGAGGAGTTTTTCGATGTGGATCGAAATATA
TTTACACGAAGAATTTCATTAACACcgattaaagatggcggatacagctt
agtccagggtttataaaggtcagagGGCGGTAACAAAAAAGGGTGGGAAA
CTAATTAAGGGTAAGGGTCTATAGtttttttCTTCTCATTATTATAGGAT
TTTCTTTATATTGCTGGATATTATTAGTAAACGATCTTTAATTAATCTAG
CTATGTAAATGATAAACATCGGTGGACTTCACTATTAACTTTGTCTCACT
CACTTCTTCATAGATGGACAGTATTAGGCGATACCAGGTCCAACTTTGAG
AACATAAAGAACGGAATACAAACACTGAAAGATTGGAGCACAACTACTTA
CGGTGACCAcgaaatgaaaatacaaatagTAAGAACATTTGATTTTAATC
ATTTgctttttccattcaaaataCAGGGGGTAGACGCAGGTAGACGaaca
ttttcaagcaaaaaaataattcttgaaaatgtATGGATATCCCActggaa
aatgataaaattaagattagtTTGAAATTAGAAAAGTTTGCCCACATTCC
AGAAAATGAAATGTCCCATTGTTCCCAATAAGGATAGGAGACTAATAACA
AGACTGATGGTGGACCctgaaaacttgaaaatgtcTCATTACATGGTTCA
GAAACCACATTTTCTTACTCTGAGACACTTcaccaatttttgattttctt
tatggaCGGTGGTACAATCGTTCTTTCGTCAGCGCCATCATCAGAATCAT
AAAAGTGCGAACTAAAGGGACTGGGGACGAGATTGGAGAAACCGTACAAA
ATAATtaagatttaattttgaaactggaaaattttagaatagCTGGGAAG
TTGAAtaaatgtgtgaaaaaaaatttcatgtacTTTTTAGTCTAAACCGC
AACTTTTGCACAACAACAGCTCGTTTATTTAACAGAACACGGATTTGGTT
GAGAATGTATGCAGCCTAATATACCTTCTGATATCCTTTGACCTACACAA
TCAATAAAAACATGTGTATAATGTGCTATGTTAAGTAAACGTTTTTAATT
GCAGAAGACTCTTGTAaattcgaacttcttttattcaaatctttctataa
ttcgaactatttttcgaattttttagtcCCCGTCATGGAAATACCTtcgt
aaaatgctttctataattcgagtttctccctaattcgaactaatGAGATT
TCCCATTGAAGCTTGAATAAATGAGAGTTCgctgtttttatcaaaataac
caGTATGTGATTCAGACTTAAAGCACCCTTAATTGAAGCGTTAGTTGAAA
TGACCCTATAGTGCATCGAATTCTTTTTGTAGGTAGACGAAGAGAAGATG
TTCATCCAAATGCATTTCTTGACACCTTTCATGCAATGGTTGGACGTGGT
GGAGTTGGAGATTAGACCTGGACAACACTCTGGAGCTGAAGTCGAAGTAA
GCTTTTTCCCCGGGCTTACGTGAAATGTCACATTTGAAtttcgctaattc
gaattcAAACTGTTTTTTCCTCCACGAAAGGGAGCAAGAACTAGTTCGGA
TtatgaaataaagaaataaagaaatttggATTAAAGAGAGAGCCCACTGT
GGTTTGTAAAATCAACTAACCATGTGTTTTAAATTAACACTTCCCAGTGT
CATAGACCCGTTGGGACCCCCGCCTCCGAAATTTCGTCCCTTCTGAATAA
AATACCAAACAATTTTAGCCccattgggaaattgactttgattttttcct
CACTTAAAGgttgaatggaaaaaaattgtactccaaaaccatccctactg
aatttgTTGTactgagaacaatagaatttccatccccattgggatttcca
TAGAAATGATCCCAAAATGATACAAGTCATCTGGATGATAGCCGGTCATG
CACATCAGGAGTTGTAATAACAGAGATTATAGGATTATTAGTAAAGTGTT
AAAAGGCCAAAATTAGTCGAAACAAACTGAATGTGATTTGTGTGAGATCT
TGCGATTGGATGTCAAAGTTGTCGCTCCTataattttaaacctttttgcT
ATAAGGGTGGAATATGCAAAAATGTGCATATGTATTTGGTAACTAGGAAG
AAGAGCCCCAAGACTGTGCAATTACATGGTTgaattaaaagagaaaaaat
ctgGTAGAATGTCTTTGGGGTgaaaatagactaaaattgcaaattttatg
CAATGAGGACTGCTGTAGCAGAAGATCGTGATGTATAaatgtgaaattaa
aaatgaacaaCAGGgggctgtgagataggggtgtaGTAATATACGATAAC
CGAATGTTATTTTACATAAACTATACTCATGTCCTTTATTTCATTCCCCT
CACAATACCCTATATTTAAATTTAACAGTCGTCTAGTGTTCTATTCCTTT
ATATCGATAGTTCAGCATATCCTCAATTCAATTCACTCTTGATATGAATA
ATAATTCGACATCTTTCATTCGTGTTTTAGGCTCATTCATTTTCGACGGG
TGTTTTCCCAATCTGTTTCCCGTTAGCTTTCGTCATCAATGTGGTAAGTG
TTTCTATCTTTGGATTGCTATAAAACATACGTTTGTTGCCAAACTCTTTC
ACAGTGCTTTAGCTTGTATCACATCCATAGAACCATTTGATTCTCCCCTG
TATCAGAAATGCTGCGCCTACACTCCACTGGAAATTTTGGTGAATACTAT
GCCAAACTACTATTTAAGGTACACTTCATTAACCATGAAAAAAGTTCCTG
AACAATTCCTTTTGGAGagtataccttaagtggattaaatttggcaaatt
tggcaAATTAACAAAAATCGTCAAACGTGACCAAATcccccccggtaaaa
tttagaaaatcggtcattcgccaaatcaaatttctgccaaatttaaCATA
AAATCTTTTCAGGTTACAATTTCTATAGATAATGTGAATTTCTTAGTATA
ATACCACGTAATAATCTTTAGTTTGCCAGAACCTAAAACCTTCACTtccg
aatttaaaaaaattaatcattcgccaaattaatcCACCTAAGATATTTTC
GAGCCTAAATAAAGATTTGAGCTTGTTTACAACCAGTATTTAAtttaaca
attttcttttcagcTGTTATTTTTCGTGCCGTTTTACGATTGGGGGCAAA
ATCATGCGAGGTTGGAGAAGATTCGAACATTCTGCAAGATTGGAACTGAC
ATCGAGTTTCTATCCAattgttga Coding sequence (CDS) from alignment at sc0000454_pilon:151763..155386+ >XLOC_017831 ID=XLOC_017831|Name=XLOC_017831|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1044bp|location=Sequence derived from alignment at sc0000454_pilon:151763..155386+ (Clytia hemisphaerica_ch_hm2_pilon)
atgtattttttcatATGTTGTGGTTACTTCTTCAGTTGGTTGCAAGCACC
AATACAAGCTTACCTGAGACCTGCTCTCTGGTTCCCTGGTCTACGCGCCA
TCCACCAGAAGAAAGAAAGatgtattttttcatATGTTGTGGTTACTTCT
TCAGTTGGTTGCAAGCACCAATACAAGCTTACCTGAGACCTGCTCTCTGG
TTCCCTGGTCTACGCGCCATCCACCAGAAGAAAGAAAGATGGACAGTATT
AGGCGATACCAGGTCCAACTTTGAGAACATAAAGAACGGAATACAAACAC
TGAAAGATTGGAGCACAACTACTTACGGTGACCAcgaaatgaaaatacaa
ataATGGACAGTATTAGGCGATACCAGGTCCAACTTTGAGAACATAAAGA
ACGGAATACAAACACTGAAAGATTGGAGCACAACTACTTACGGTGACCAc
gaaatgaaaatacaaataGTAGACGAAGAGAAGATGTTCATCCAAATGCA
TTTCTTGACACCTTTCATGCAATGGTTGGACGTGGTGGAGTTGGAGATTA
GACCTGGACAACACTCTGGAGCTGAAGTCGAAGTAGACGAAGAGAAGATG
TTCATCCAAATGCATTTCTTGACACCTTTCATGCAATGGTTGGACGTGGT
GGAGTTGGAGATTAGACCTGGACAACACTCTGGAGCTGAAGTCGAAGCTC
ATTCATTTTCGACGGGTGTTTTCCCAATCTGTTTCCCGTTAGCTTTCGTC
ATCAATGTGGCTCATTCATTTTCGACGGGTGTTTTCCCAATCTGTTTCCC
GTTAGCTTTCGTCATCAATGTGcTGTTATTTTTCGTGCCGTTTTACGATT
GGGGGCAAAATCATGCGAGGTTGGAGAAGATTCGAACATTCTGCAAGATT
GGAACTGACATCGAGTTTCTATCCAattgttgacTGTTATTTTTCGTGCC
GTTTTACGATTGGGGGCAAAATCATGCGAGGTTGGAGAAGATTCGAACAT
TCTGCAAGATTGGAACTGACATCGAGTTTCTATCCAattgttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000454_pilon | genome | sc0000454_pilon:151763..155386 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 412-522:3514 |
| Aaloc | 349-411:2881 |
| Aaloc | 235-348:1733 |
| Aaloc | 121-234:665 |
| Aaloc | 1-117:1 |
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