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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000454_pilon:141570..148204+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017830 ID=XLOC_017830|Name=XLOC_017830|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6635bp|location=Sequence derived from alignment at sc0000454_pilon:141570..148204+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAAACCATCAGTTTCTATTTGGTAAGGTCattatctttattttat
tagcaatttgtgtttgttatttttctatatcaatattctatatttgtttc
tttgtttgCATATCCCAGGCTGCTTTGCTGCAGTAAGGGCTAAAAAATTC
GACTTTTTAGATTTCTTCTTGATTCAAAGAAAGTATATCTCCAAATCCAG
GGCAATACCCTGGGTTACAAAATAAAGTCTACACTAATGTAGAGTGCCTG
TCATGTGGTATTATCATTAATCTTTGCAATTGAGCCTCCCCTAATCAGaa
gaaaaagttacaaattacAGCTTACAATAATACACCTATCGACCCTGTTG
TGGTCAGCATGAGGAGACTGGTAAATGAAGCTGAATTTGACCCTTATCTG
TTTCCAgatggtgtcaatcgaacgaattgaacaccaaatcaattgaacac
aatcgaatgcATTTGAATGTTACCCAGAATTTGCTGTTTGATTGCTTCAA
TTATtttcgattatgtttgattaatTCAATTGTATTGTACTTGTGCACTC
ACTCTTAGCTAATTTTCTTATGGTGTGGGCCAATATGATTACAATAAAAC
TTAACTTCAAACATTATATCATAATCAAACATAATATTAGCTCAATCTAA
CATAATCAAATATTACCTAGGAATTGGCCTTTCAATTGTgttcaacaatc
gaattgcaatgaTTTGatattattcgattgcgttcaattacATACGATTG
GTTCAATTGGGATTTTAATTCGAACGTCTGTTCAATTAAACTGTCTGGCT
GTTTTAGTACATTAAATATTTATAATAGATGTCAATGATAATAAACCTTC
AGTTTCTTGTAtttatccatttttttttactttattccAGGGAGGATATA
CATCTAAGTGATGCAACAACAATATTATCATTTGAAACTCCtcaagaaat
aaaaaagttagttcCTAAAATAAATACTTATGAATATTGAAATGGAGTGT
taattattctttttctttgggTCATTTTAAGCATTTAATTGGTTCGATGG
TTGATGTTGTATATTGTGTTGTTTTCTATTGTAGTGcaaattttaaaagt
aaaagaaattctttaaaatatttcatttgactatgattatttgattattt
ctttgTTACTTTAGTTTCATTGTGAAGAAATTTAACATTGACTTAATAAA
GGATGGTTTACGTGGAAAGATAATCTTGGACCTCTATTATTACACTTTGG
TGTATCCTTTTCAATGTCACTGCTATCATtaataattgaataaaaaaata
aactttgtcAGGGTACTTGCTTTGCAAGATAAGGTAGATTAGACATGTCT
AAGCCaaagttcaaaaaagaattttataaattctatacaatttttgaagc
ttttatgCCCCTATGtaagacttttttttcaaaaattacaaaattaaatc
GAAATTTCAAGAACATATGATGTTTCAAGGAGTTAATTTTTGAGTATTTG
CAATTTTGGAACCCAGCTTAtttatggtttttgtacccaTTTCAAGAACT
TTTGCCATAATTAatccatttttttctaaatattaaaaAGTTGTTTATCA
CTGGGCTATCCTTGTAAAAATCCTGTATTAGTGAATTATAAggttttttc
aagtaaaattaCTTAGGCTCTTCTTTAACATTGCTTTCATCATATCAGTT
TTGCAAAAGAGAATGGTTTCAATGAAGAGCAAACATCTGCCTTCTTTTCG
ATTGTGAAAAGAACTCATGGCAAAACTATTGGTAATGAATTTTTGGCTAG
CTTTGATGGCCATTCTATTTAgagcttaaagctcaaaaagttaaaaactt
ctgaaggcttcaaaatttttggatgctcTTGTGTATATAGGTATATAAGG
GGAATGCATTTGAATAATATTCAATTTGCTGCAATGACTTCATGAAATTA
TGTAACTTTCCTGtttttttACCAAATGCCCAAAATACTGAATCAGCTAT
CCCTCCTGTAAAAGTGACATAAGGTTGCATATCCTTAAGATTGTGatgtt
tttcaaatcttttaatATCTTTTTCATTAGAGACTCCGTATGGTAACACG
GAAGAAGCATTccgttttttccaaaatatgctAACATGTCATTCTGTAAA
GGTATCATGAATTATAATTTATTGCtaactgtttttgtttttttacggGG
TATGTCACAAGTTTTTACGCAATGCAATTGTTCTTTTCACATGACAACGG
GCTTACATAGCAAGGAGTTGCCCGTCAttaagaaaattcattgtgacgtc
aattattttcaaagaaaatggacACTACATTGAAATCATTTGTCTTCATT
TATCATGTCTGACATCAGAAATTCACACAATAATTCACTTTATCTTTTTT
AGTCGTCTATCCCAGTCCTTTAGGCTATAAAGTgttgaaaattggccaaa
agtTATTCTCAAAGGAAACAGTTTTACAAACACAATAATGACCGATTAGT
GAGGGTTGTACTGAAGATATTGCCCTCGGTTTGTAACTTGACCTCAGGCA
ATATTTTCTCGGTACAGAAGCTCTCACTAACCGATAGtcattgttttatt
actggaattctgaaataaaataaaatatactgGTTCCACTTTACTGGGTA
GGAAATTTGAAGGTTCCAGGAgggggggggCAATAAGCAGTTACTGTCCT
CGATTAATTATGACTTTTTGGTGTGTTTACTGACTGAAGATCTGATATCt
ttgaaatggattttcttttgtatttttcagcgTCCACCTTTCTATGTTGA
TCTGTTTAACATCCAGCAAACAAAGATAATTACTGACTATGTTCTAAACA
CGTAAGCATTGTATTTGGGAATTAAATCAGTTCCTTAAAAACGTGGATTG
AATTAAAACATAGATTACTGATTTTGATATCCAGCTATGTTTAGAAATTT
CAGTTATGCTTACATTGAACAAACCAATTTGATTTACCTTTAGatatttc
aaacatttcaaaCTGTACAAGTATGCATTCACACCAAAGGTAGGTCTCAA
AATATTACATAAAGTAGTCCAGGGAAATTTGACATGAGATAACTCAGTAG
CACTTCACTCTCATCATCTTCTTTTCAGGTTACGATGAATGTCTCGATTA
CATACCAAGGCTTGAAACCTGAACCTGAACCTATACGTAAGAAGAATCTC
AAATTCTCCTCCTCCTTGATCTCATCTAGAGAGCAGACAATATCACTCTT
CCTCCCCTCCCCTCTCTCAAAGTTTCTCAAATGTGTAATACTGCAGGTTG
TCTTGGAACGGTGGTCAAAGAAGGTTTGAGGGAGAGCAATTACTCCCATT
AAAAAAGTGACATCAAAAGGAAAACTCTCCGCCATTGATTTAGTTTCGCC
CACTTTGTAACAGCCGTTGTGTCAACAGAAACAGGTTTTCTTCTCCTTAA
TTTATATAACTGGGTACAAGGGGGTAACATAATTGCTCGTTGATATACAA
ATTATTGTAATAGTATTTTGATTCTTCTCTTTTCAGCGGAAATCACTGCA
GAAGATTGTGACGAAAATCGCGATGAAATACCTTATGATGAGTCTTCAAt
aaatgtaagaatattttttgtagATTACGATGCCCGCTGGGATGGCCAtt
tttttGGTCGGCCCTCTTGCTTACTTTTTATCAATGTTTAGTAAGCGAGA
TATAACATATCACttataaaggccggtctccactttcgcgcgaaatgggc
gacagttttttcttaaccttttttgcctgaagaaaagattacgtcataaa
aaagttttgcgcaaacaaaaaaaaaagttgaagagagttctacttttttc
atccgttgcgtcaatttcgaccaatcgaattgcttcatttttcaaccaac
caatgactttccaaaaacatcaaaaaaattttcgctcatttcgtgcgaaa
gtggagaccagcaTTAAAGGATTGATTTCCACAAAGTATTGAAACTTAAA
ATATTGTTTGTGAGTTTATTGTGAATGAACCATACTAGACCAGTGACCGA
GGttgtgaattgtgtcacttcgtagggcaccccctAGATCAGGgcgaatt
tttgatattatgctgcTAATAAgatgtagaattgacaaaaaaaatttgcg
cttcaaatctcctgcagttttcgagtgaatcgatttttagttaatcaaGG
GTCTCCCCTTTACTAACGTTTTTTCCgaagtttgaaaatcatgtATTTGA
TGCTATAATCAGATTCAGTGCTAGAAGTAGGTAAAGAAAATGGCGATATT
TGTTATGTTTTAACAatctggtgccgagaaatggcatttttaaggcgaaa
aatcaacgttttgggcgttttccgatgacgtcagcattttgaTAAGagca
tttcaaaagaaaatcattctCACCGTTGGATAGCCTTGAATTAGTactat
ccaaaaatggtatggtttgttaagtTTTGGTGTCTAGCTCTCGTGATATa
gatatgctgaaaaactgctgactcagcaaaaaatatcgataatttttgat
atctaaaccaaaatatctcgagatctagacatcaaatgaaaactgcagga
gattcgaagggcaaatttttttgtcagttctacaccctattaggagcgta
atatcaaaaatttgggGTGCCCtacaaaaacctgttttaaggctttttCT
GAATCTCGGACACAGGTCTATACAAAAAACATTGTATCTAAATAAAAAAC
CTTGGATCTTAAGACCAAGCAAAGACAATTCTTTGTTGAGTGCTCCTTTT
AAACGTTATTTTATtgtaaagtgaattttaacatttactcttaggttcca
aataaacaggggggttcgaataaacgggggggggggttggaaaattttca
aaattcaaataaacggggggcctaaattgccgggggggggttgCAAATTG
TACTTtggaaaacccaaaaataaggtaaatataggctaaaatcgggctat
ttagagcagaataagggacttttctttgaaagctgataaaattcttaaga
attaataaacggggggagggtcctaataaggtccggggggttggaaaatt
ttcgaaaaattaacaagcggggggggggggcgtttatttggaacctaaga
gtaaatagTAATACCTTGAAATTTAAGTAagactatcctctttctaaCTT
TTAAGCTCAACCAGTAACCAAGACTCTTTTTGCCTCTTGACCCAGCTGAC
GATGTTTCAACCATTATCTTTAATGTTTACAACGTCTAAAtagcgttaga
tgaacgttgaaagaacgttgtgtgccagctggggaggTCATCAAAcgtac
aaattttatttttgagtcctttctgtagttttctttccttatcaaaatat
ttttaatttttaggaaGGGAGTGAAATATCAGTGGAACCTAAAGAATCTG
AAGATGgtgctttgtttgttttatttcatttgatGTTTTTATATCCCATC
AAGGAAAATTCTTCTGCCGACGACCCatttttcgccctgcctattctaat
tgtgaattaaagtgggcagatagttggctgtctaaagtcaatgcattgcc
ctcttttgacgtcaatgccatgtcttctttcaatcttttctaaGCAAAGA
TTTCAACTGTCAACTTTGCGCCCCCTTTTTGCCTACtcaaacaattagaa
taggtagGGCAGAAAGTtgaccgtctaaactagaggtaaacaattaaaat
ggaaaatttaaatTGAAGGTTTATTTCCTATGAAACCAATCATATGGAAA
TAACTTTGCTAATAAGAttacatttttataaataaattgCATACATAAGT
GTTGATTTTAAATCATGTTTGAAGAGAAGCACTTACTTCATAAGTTCTTT
ATTTACATGGGGTCGAATTTCAAAACACgtgaattttgttgaaagtcaCA
CCACTTGTTTTCTATAACGCGTGACTTGGTCCGATCATGTTGTCATAGAT
ATTCATTGCTTGTATTACGAGTTCTCCCTTAATTGGTGTTCCCAActcta
aaattgttttttataccTTTCAGAAAATCCTGCTATGCGAGAGTTGAAGA
GGATTATACGAACCACACTGGACGAACAGATCAATAAAGTATATTTTGTA
CTattacaaaaaaactttcagtttCACTCCCTTCGATCTACCAGACTTTT
TGCCgttcaaaagtttcaaagaaaaGCTCTCAATCAGGGTCTCAATCTCA
ATCTTGCTGAAGCTGCACTAAGAATTGTATCATAGGTTTCTCaattaaag
aacaacatttacCAATTCTATCAGTAGCAGTAATAATCTTAGTTccaaaa
aaggtctatcgaccCCTTGAACACATTTCTGCACGAGTTCTAAAAGGTTC
AACAAAACGATTTGATCTctccttttttttaaatctgtgttgattctttt
aattgaaaatccATGTATTCAGCAAACCAATAACCGTATattcatcaaaa
ttattttagttAAAACTAAACATGGACCAGAAGTTGAAGTCGAATGAAGA
TACAGTGATGTCAAAGATGACGGGCGTGTCTGGGCGTGATCAGCCATCTG
CAAAGGGAGGGAGAAAAGGAGGAAAGAAGAAATAA Coding sequence (CDS) from alignment at sc0000454_pilon:141570..148204+ >XLOC_017830 ID=XLOC_017830|Name=XLOC_017830|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1620bp|location=Sequence derived from alignment at sc0000454_pilon:141570..148204+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAAACCATCAGTTTCTATTTGATGGGCAAACCATCAGTTTCTATT
TGGGAGGATATACATCTAAGTGATGCAACAACAATATTATCATTTGAAAC
TCCtcaagaaataaaaaaGGAGGATATACATCTAAGTGATGCAACAACAA
TATTATCATTTGAAACTCCtcaagaaataaaaaaTTTCATTGTGAAGAAA
TTTAACATTGACTTAATAAAGGATGGTTTACGTGGAAAGATAATCTTGGA
CCTCTATTATTACACTTTGGTTTTCATTGTGAAGAAATTTAACATTGACT
TAATAAAGGATGGTTTACGTGGAAAGATAATCTTGGACCTCTATTATTAC
ACTTTGGTTTTTGCAAAAGAGAATGGTTTCAATGAAGAGCAAACATCTGC
CTTCTTTTCGATTGTGAAAAGAACTCATGGCAAAACTATTGTTTTGCAAA
AGAGAATGGTTTCAATGAAGAGCAAACATCTGCCTTCTTTTCGATTGTGA
AAAGAACTCATGGCAAAACTATTGAGACTCCGTATGGTAACACGGAAGAA
GCATTccgttttttccaaaatatgctAACATGTCATTCTGTAAAGAGACT
CCGTATGGTAACACGGAAGAAGCATTccgttttttccaaaatatgctAAC
ATGTCATTCTGTAAAGcgTCCACCTTTCTATGTTGATCTGTTTAACATCC
AGCAAACAAAGATAATTACTGACTATGTTCTAAACACcgTCCACCTTTCT
ATGTTGATCTGTTTAACATCCAGCAAACAAAGATAATTACTGACTATGTT
CTAAACACatatttcaaacatttcaaaCTGTACAAGTATGCATTCACACC
AAAGatatttcaaacatttcaaaCTGTACAAGTATGCATTCACACCAAAG
GTTACGATGAATGTCTCGATTACATACCAAGGCTTGAAACCTGAACCTGA
ACCTATACGTTACGATGAATGTCTCGATTACATACCAAGGCTTGAAACCT
GAACCTGAACCTATACCGGAAATCACTGCAGAAGATTGTGACGAAAATCG
CGATGAAATACCTTATGATGAGTCTTCAAtaaatCGGAAATCACTGCAGA
AGATTGTGACGAAAATCGCGATGAAATACCTTATGATGAGTCTTCAAtaa
atgaaGGGAGTGAAATATCAGTGGAACCTAAAGAATCTGAAGATGgaaGG
GAGTGAAATATCAGTGGAACCTAAAGAATCTGAAGATGAAAATCCTGCTA
TGCGAGAGTTGAAGAGGATTATACGAACCACACTGGACGAACAGATCAAT
AAAAAAATCCTGCTATGCGAGAGTTGAAGAGGATTATACGAACCACACTG
GACGAACAGATCAATAAAttAAAACTAAACATGGACCAGAAGTTGAAGTC
GAATGAAGATACAGTGATGTCAAAGATGACGGGCGTGTCTGGGCGTGATC
AGCCATCTGCAAAGGGAGGGAGAAAAGGAGGAAAGAAGAAATAAttAAAA
CTAAACATGGACCAGAAGTTGAAGTCGAATGAAGATACAGTGATGTCAAA
GATGACGGGCGTGTCTGGGCGTGATCAGCCATCTGCAAAGGGAGGGAGAA
AAGGAGGAAAGAAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000454_pilon | genome | sc0000454_pilon:141570..148204 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 685-810:6510 |
| Aaloc | 622-684:6076 |
| Aaloc | 577-618:5414 |
| Aaloc | 511-576:3539 |
| Aaloc | 451-507:3129 |
| Aaloc | 406-450:2995 |
| Aaloc | 334-402:2781 |
| Aaloc | 265-333:2083 |
| Aaloc | 181-261:1700 |
| Aaloc | 94-177:1166 |
| Aaloc | 28-90:892 |
| Aaloc | 1-24:1 |
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