XLOC_017818 (mRNA) -

Overview
NameXLOC_017818
Unique NameXLOC_017818
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000297_pilon:174626..175247-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017818 ID=XLOC_017818|Name=XLOC_017818|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=622bp|location=Sequence derived from alignment at sc0000297_pilon:174626..175247- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTGTGTTTTCCTGATGGGAAAGTTGGCTCAAAACAATTTTCTAATTT TCAAAAAACATCGGGGAGAGTGGCACCACAAGGACTGTGAGAACTTCATG TAAACTAGTTCAATCCACCCAAGGGTGTGAAAAAAGTGGGAAAATGTTAA GTTTTCCACTTGGCTGAAAGAAGAGAAAAATATAGATTGTGTTCCTCTAT ATCCATTTCTAGGAAACAGATTTAATATTCTCTTTCTTAATGGAGGTGGG CTCTTTAAAATTTATGATCATCTGATTGCTTTCCTTGAAAGCTTAGATAA AGACAATGAAAATCTGCTTGTTCTTGCTGTTAAACGTGATCTCAATGTTC GTAATTTCAAAGTAGGATGTAGAGCACTAGGATTGATCAACAAGCTAATC ACAGGGCCTCTCTGGCGTAAAATGGTAGAAGAAAAATCTGCTATTTCAAT GTCTGAACATTATCAGCACATGTACATGTGTTTCAAAAAGTGGGCTAATA ATCCTGATGATTTTATATTAGGGAAAGATTCCTTATTTGATGATCTTCTC CATAAAGATGATATTTTTGAAGCTTTGATTGAACCTAATGAAACAGACTT TGATTTATTGAAACAGCTCCTC

Coding sequence (CDS) from alignment at sc0000297_pilon:174626..175247-

>XLOC_017818 ID=XLOC_017818|Name=XLOC_017818|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1244bp|location=Sequence derived from alignment at sc0000297_pilon:174626..175247- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTGTGTTTTCCTGATGGGAAAGTTGGCTCAAAACAATTTTCTAATTT
TCAAAAAACATCGGGGAGAGTGGCACCACAAGGACTGTGAGAACTTCATG
TAAACTAGTTCAATCCACCCAAGGGTGTGAAAAAAGTGGGAAAATGTTAA
GTTTTCCACTTGGCTGAAAGAAGAGAAAAATATAGATTGTGTTCCTCTAT
ATCCATTTCTAGGAAACAGATTTAATATTCTCTTTCTTAATGGAGGTGGG
CTCTTTAAAATTTATGATCATCTGATTGCTTTCCTTGAAAGCTTAGATAA
AGACAATGAAAATCTGCTTGTTCTTGCTGTTAAACGTGATCTCAATGTTC
GTAATTTCAAAGTAGGATGTAGAGCACTAGGATTGATCAACAAGCTAATC
ACAGGGCCTCTCTGGCGTAAAATGGTAGAAGAAAAATCTGCTATTTCAAT
GTCTGAACATTATCAGCACATGTACATGTGTTTCAAAAAGTGGGCTAATA
ATCCTGATGATTTTATATTAGGGAAAGATTCCTTATTTGATGATCTTCTC
CATAAAGATGATATTTTTGAAGCTTTGATTGAACCTAATGAAACAGACTT
TGATTTATTGAAACAGCTCCTCAATTTGTGTTTTCCTGATGGGAAAGTTG
GCTCAAAACAATTTTCTAATTTTCAAAAAACATCGGGGAGAGTGGCACCA
CAAGGACTGTGAGAACTTCATGTAAACTAGTTCAATCCACCCAAGGGTGT
GAAAAAAGTGGGAAAATGTTAAGTTTTCCACTTGGCTGAAAGAAGAGAAA
AATATAGATTGTGTTCCTCTATATCCATTTCTAGGAAACAGATTTAATAT
TCTCTTTCTTAATGGAGGTGGGCTCTTTAAAATTTATGATCATCTGATTG
CTTTCCTTGAAAGCTTAGATAAAGACAATGAAAATCTGCTTGTTCTTGCT
GTTAAACGTGATCTCAATGTTCGTAATTTCAAAGTAGGATGTAGAGCACT
AGGATTGATCAACAAGCTAATCACAGGGCCTCTCTGGCGTAAAATGGTAG
AAGAAAAATCTGCTATTTCAATGTCTGAACATTATCAGCACATGTACATG
TGTTTCAAAAAGTGGGCTAATAATCCTGATGATTTTATATTAGGGAAAGA
TTCCTTATTTGATGATCTTCTCCATAAAGATGATATTTTTGAAGCTTTGA
TTGAACCTAATGAAACAGACTTTGATTTATTGAAACAGCTCCTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_017818XLOC_017818-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000297_pilongenomesc0000297_pilon:174626..175247 -
Properties
Property NameValue
Aaloc451-621:172
Aaloc163-450:475
Aaloc100-159:537
Aaloc70-90:558
Aaloc7-69:623