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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000327_pilon:113821..115749+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017784 ID=XLOC_017784|Name=XLOC_017784|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1929bp|location=Sequence derived from alignment at sc0000327_pilon:113821..115749+ (Clytia hemisphaerica_ch_hm2_pilon)
atggctAATTCACAGGAAAAGACTGCTGTAAATTATTCTATCCTCGAGGA
AACTGATGTTCCTGGCGCCAAATTAAACAAACCTCCTGAAAGTTGTATCG
TGGAAGAACTTAAAAGATGGCTAGAATgtcattctttaaaaaaatctggg
aaaaagaACGTTTTAATCCAGAGAGTAAGGGATGCATTGCCTATGAATCT
CCCTATCAACCCAAGTGTAGATGGGGGAAAGTGGTATGTCATCAAAGCCa
aaaaaaCCAACACTGCTCCTGTTGCTTCTTCTACATCTGCTGATGCTGTC
CCTTCTACATCTGTTGATGCTGTCCATTCTACTTCTGCTGAAGCTGTCCC
TTCTACTACATCTGCTGATCCTGCTGTTCCTTCTTCACCCACCAGTAATC
ATTTACCATCTGATGGCTGGAAAGTATTCCCCTCTAGAAacattccAaaa
aattttaactACGGACATGTGTATTATTATATGGTGGAATCTATTGGAAC
TGCTGCAGATATTGTTGACAACGATAGTGACAGTGAGGATGACCTGTATA
GTACATGTGACACTGTTACTGCAAAACCTCTGAAAAAAGgtagaaattta
ttgaaaagtgGATTTGTATCAAATACTCAAGATAACTTTAATGAATTGAA
ACAAGAATATTATATTCAATCTCACGTTCACCATTCAATGAAGAATGAAG
ATCCATTAAATGTCAGTGTCATCGTTAGTAATGTTAGTGGGTACGTCAAG
TTTTCAAAGTGTGATTGTCGAGCAAGTGCCATTGGAAGGTGCTGTCATGT
GGCTGCACTACTGTTAAAACTAAGTGACACTTCATCAGAAAATAATATTG
TTATTCAACCATCAACATCAGAGCCTTGTACATGGAACAAGGGCaaaaaa
cgtgaaaaagaacccaaaaaGTTACACGAAGCTGAGTATAGTTCAAGCAA
GAGAAGGCGACCATCTGAATTGTATAATTTTGATCCAGGGCCGGAATCTA
TGAGAAAGGTTTCCAGCGaatcaacaaaagaatttattgtCTCTATGCAG
TCTGACTCTAAGCCATCAATGTGGGAATCACTCTTGCCACTACGCTATGA
AAACTTCAAACTAGAGCAAGCTGACATTGAAGTGTACTGTAATTTGACTC
TgtatttcattgaaaacattgaaagaGAAAACagtgaatttttaaaatat
aaaactttcggAGAAATACCAGGTACTGATGACCAAGCAGATTCTTTTCA
ATGGCATCGCCAAAGGAGGCTTCGTATCACTGCTTCAACCTGCAAAACTG
CAGTTACTCTGGGGGGAAATCTTTCAGAGTATGACTCTTTCCATCCACAT
TTTTCGTTCATAAGTAAGAAACTTTGGTTTCCCTCTAATTACACAAGCAT
CTACATGCAGTATGGGGTAGAATACGAAAAGATTGCATTGAAAGAGTACG
GAGAGAAAAGGAATGCTTCAGTTGCTTTAAGTGGACTGTGGATCAATAAA
AAGTACGCACATTTAGCAGCTAGTCCAGATGGTCTTCTTATCAACGATGG
TAAAATTCAGGGAATTTTGGAagttaaatgtttaaaaattttgaaactgc
aTACTGTTTCTGATATTGTGAATGAAGAATGTCCAAAAGCTGAGGTAGCC
CGACAATGTTTTAAGTTATCTGATGGAAAATTAGTATTGAAGAAATGCCA
TATGTACTATTACCAAATTCAACTGCAGCTTTTGATAACAGAAACTGATT
TTTGTGACTTTATTCTTTACTGTTATAAAGGACCTTCTCATGTAGAAAGG
ATTCTACCAGACTTAGAACTTcaacaaaaaatcattactAATACTCGATT
GTTCTGGGAAAAAGTGTATATTCCCGAATATTTTTTGATGCGTGTCCCAA
GAGATCTCTTACCTCTGGTGGTTGAGTGA Coding sequence (CDS) from alignment at sc0000327_pilon:113821..115749+ >XLOC_017784 ID=XLOC_017784|Name=XLOC_017784|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3594bp|location=Sequence derived from alignment at sc0000327_pilon:113821..115749+ (Clytia hemisphaerica_ch_hm2_pilon)
atggctAATTCACAGGAAAAGACTGCTGTAAATTATTCTATCCTCGAGGA
AACTGATGTTCCTGGCGCCAAATTAAACAAACCTCCTGAAAGTTGTATCG
TGGAAGAACTTAAAAGATGGCTAGAATgtcattctttaaaaaaatctggg
aaaaagaACGTTTTAATCCAGAGAGTAAGGGATGCATTGCCTATGAATCT
CCCTATCAACCCAAGTGTAGATGGGGGAAAGTGGTATGTCATCAAAGCCa
aaaaaaCCAACACTGCTCCTGTTGCTTCTTCTACATCTGCTGATGCTGTC
CCTTCTACATCTGTTGATGCTGTCCATTCTACTTCTGCTGAAGCTGTCCC
TTCTACTACATCTGCTGATCCTGCTGTTCCTTCTTCACCCACCAGTAATC
ATTTACCATCTGATGGCTGGAAAGTATTCCCCTCTAGAAacattccAaaa
aattttaactACGGACATGTGTATTATTATATGGTGGAATCTATTGGAAC
TGCTGCAGATATTGTTGACAACGATAGTGACAGTGAGGATGACatggctA
ATTCACAGGAAAAGACTGCTGTAAATTATTCTATCCTCGAGGAAACTGAT
GTTCCTGGCGCCAAATTAAACAAACCTCCTGAAAGTTGTATCGTGGAAGA
ACTTAAAAGATGGCTAGAATgtcattctttaaaaaaatctgggaaaaaga
ACGTTTTAATCCAGAGAGTAAGGGATGCATTGCCTATGAATCTCCCTATC
AACCCAAGTGTAGATGGGGGAAAGTGGTATGTCATCAAAGCCaaaaaaaC
CAACACTGCTCCTGTTGCTTCTTCTACATCTGCTGATGCTGTCCCTTCTA
CATCTGTTGATGCTGTCCATTCTACTTCTGCTGAAGCTGTCCCTTCTACT
ACATCTGCTGATCCTGCTGTTCCTTCTTCACCCACCAGTAATCATTTACC
ATCTGATGGCTGGAAAGTATTCCCCTCTAGAAacattccAaaaaatttta
actACGGACATGTGTATTATTATATGGTGGAATCTATTGGAACTGCTGCA
GATATTGTTGACAACGATAGTGACAGTGAGGATGACGTTCACCATTCAAT
GAAGAATGAAGATCCATTAAATGTCAGTGTCATCGTTAGTAATGTTAGTG
GGTACGTCAAGTTTTCAAAGTGTGATTGTCGAGCAAGTGCCATTGGAAGG
TGCTGTCATGTGGCTGCACTACTGTTAAAACTAAGTGACACTTCATCAGA
AAATAATATTGTTATTCAACCATCAACATCAGAGCCTTGTACATGGAACA
AGGGCaaaaaacgtgaaaaagaacccaaaaaGTTACACGAAGCTGAGTAT
AGTTCAAGCAAGAGAAGGCGACCATCTGAATTGTATAATTTTGATCCAGG
GCCGGAATCTATGAGAAAGGTTTCCAGCGaatcaacaaaagaatttattg
tCTCTATGCAGTCTGACTCTAAGCCATCAATGTGGGAATCACTCTTGCCA
CTACGCTATGAAAACTTCAAACTAGAGCAAGCTGACATTGAAGTGTACTG
TAATTTGACTCTgtatttcattgaaaacattgaaagaGAAAACagtgaat
ttttaaaatataaaactttcggAGAAATACCAGGTACTGATGACCAAGCA
GATTCTTTTCAATGGCATCGCCAAAGGAGGCTTCGTATCACTGCTTCAAC
CTGCAAAACTGCAGTTACTCTGGGGGGAAATCTTTCAGAGTATGACTCTT
TCCATCCACATTTTTCGTTCATAAGTAAGAAACTTTGGTTTCCCTCTAAT
TACACAAGCATCTACATGCAGTATGGGGTAGAATACGAAAAGATTGCATT
GAAAGAGTACGGAGAGAAAAGGAATGCTTCAGTTGCTTTAAGTGGACTGT
GGATCAATAAAAAGTACGCACATTTAGCAGCTAGTCCAGATGGTCTTCTT
ATCAACGATGGTAAAATTCAGGGAATTTTGGAagttaaatgtttaaaaat
tttgaaactgcaTACTGTTTCTGATATTGTGAATGAAGAATGTCCAAAAG
CTGAGGTAGCCCGACAATGTTTTAAGTTATCTGATGGAAAATTAGTATTG
AAGAAATGCCATATGTACTATTACCAAATTCAACTGCAGCTTTTGATAAC
AGAAACTGATTTTTGTGACTTTATTCTTTACTGTTATAAAGGACCTTCTC
ATGTAGAAAGGATTCTACCAGACTTAGAACTTcaacaaaaaatcattact
AATACTCGATTGTTCTGGGAAAAAGTGTATATTCCCGAATATTTTTTGAT
GCGTGTCCCAAGAGATCTCTTACCTCTGGTGGTTGAGTGAGTTCACCATT
CAATGAAGAATGAAGATCCATTAAATGTCAGTGTCATCGTTAGTAATGTT
AGTGGGTACGTCAAGTTTTCAAAGTGTGATTGTCGAGCAAGTGCCATTGG
AAGGTGCTGTCATGTGGCTGCACTACTGTTAAAACTAAGTGACACTTCAT
CAGAAAATAATATTGTTATTCAACCATCAACATCAGAGCCTTGTACATGG
AACAAGGGCaaaaaacgtgaaaaagaacccaaaaaGTTACACGAAGCTGA
GTATAGTTCAAGCAAGAGAAGGCGACCATCTGAATTGTATAATTTTGATC
CAGGGCCGGAATCTATGAGAAAGGTTTCCAGCGaatcaacaaaagaattt
attgtCTCTATGCAGTCTGACTCTAAGCCATCAATGTGGGAATCACTCTT
GCCACTACGCTATGAAAACTTCAAACTAGAGCAAGCTGACATTGAAGTGT
ACTGTAATTTGACTCTgtatttcattgaaaacattgaaagaGAAAACagt
gaatttttaaaatataaaactttcggAGAAATACCAGGTACTGATGACCA
AGCAGATTCTTTTCAATGGCATCGCCAAAGGAGGCTTCGTATCACTGCTT
CAACCTGCAAAACTGCAGTTACTCTGGGGGGAAATCTTTCAGAGTATGAC
TCTTTCCATCCACATTTTTCGTTCATAAGTAAGAAACTTTGGTTTCCCTC
TAATTACACAAGCATCTACATGCAGTATGGGGTAGAATACGAAAAGATTG
CATTGAAAGAGTACGGAGAGAAAAGGAATGCTTCAGTTGCTTTAAGTGGA
CTGTGGATCAATAAAAAGTACGCACATTTAGCAGCTAGTCCAGATGGTCT
TCTTATCAACGATGGTAAAATTCAGGGAATTTTGGAagttaaatgtttaa
aaattttgaaactgcaTACTGTTTCTGATATTGTGAATGAAGAATGTCCA
AAAGCTGAGGTAGCCCGACAATGTTTTAAGTTATCTGATGGAAAATTAGT
ATTGAAGAAATGCCATATGTACTATTACCAAATTCAACTGCAGCTTTTGA
TAACAGAAACTGATTTTTGTGACTTTATTCTTTACTGTTATAAAGGACCT
TCTCATGTAGAAAGGATTCTACCAGACTTAGAACTTcaacaaaaaatcat
tactAATACTCGATTGTTCTGGGAAAAAGTGTATATTCCCGAATATTTTT
TGATGCGTGTCCCAAGAGATCTCTTACCTCTGGTGGTTGAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000327_pilon | genome | sc0000327_pilon:113821..115749 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-1797:676 |
| Aaloc | 1-543:1 |
|
