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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000257_pilon:146398..149356+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_017782 ID=XLOC_017782|Name=XLOC_017782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2959bp|location=Sequence derived from alignment at sc0000257_pilon:146398..149356+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTCAGTCGCAAACTTAGTGACAGATTGACATCACTTGAAAGTAA
ATTTCCTTCATTATAGTTAACTCTTTACTAAAATTATGATTTAAAGTAAT
AccttattgaaaaaataattctgaGTGGCTGACtttaatattgaaaaaat
ttcgaaaatgaagatgaaaaattgagaagaaaataatgaagatttgccaa
aaatgatttattttgaaatcagcGAAGTTTAAAGcttcagaaaaatataa
attcctCTGCTCAGAATAATCTTTTAAACGAGCTATTACGTTTCAATAtg
tatttttttccttcaagagTAATTAACCAAAATGTACGAGCTGCCAATTT
CTTTTGAGATACATTTTTAACTGTTAATCATTGAAACCGTGATCGATGTC
AAAAAGTGTTGTGTGAAAGAGAAGCGTgcgtgtgtgtgtgtgtgtgtgtg
tgtgattTCTTTCTGAGAGTAAAACTTCGATAGTTTTGTTTTTGCTTATA
GTCATTaaaaaaaCATCTGATctaaaatcttgttttttttcaattagata
ATGTTGAAGGTGTCAAGGGGCGTCAACATAAATTGATGGAAATGCTTGTC
AAGATCCACGAGCTGCTAAAATTTCGTGATCAGTCAGCTGCGCGCGATTC
AACGATCCCATCCATTGAGGATGAAAACGATTTTGAATCCGTTGAACACG
CCCTGATGGATGATTCAACAAGAAATGAATTTGtaagtattttcatttta
agcAATGTTAAGTATTCCCGCTTTGTGTAAAGAGTACCAGTATATGCGAT
AAGTAGTCATTGGTGCCACCAAATTCTACAAAATACTAGTTCAAGTAGTA
ATATTTTCAGATTCCATCGAAACTTAACCCAGCTATGCTCTTCAAAGGGC
ATTTGATAGGCAGGgaaaacttaaaacttaaaaccGGCCTTTTTGACTAC
GGGTTTCATCTAGTTGGTACCGTAAACCCGCTCAGCTTCACCATAGAAAA
GGTTTAAGTTTACAATCGCAAAGATTTGCTTATTTTCGAAATTATGATGT
AATTGACCCCCAGGAACATTACAATCATTGCGATTGTAAAGTTGAGCttt
ttttGGTAAAGTAGAGTGGTTTTACGGTATATTTGCATTTCAAATAcggg
gccgtccatatagtacgtacgcaaagattttccaaaaatttgatacccct
tccccccttgtacgcagagaacaatagaaatgatgtcatttaaacaatag
atgtacgcttttgctaaaccccctctccccccttcactgcgtacgtacta
tatggatgaccCCTACCTTCTAAATTCTTAACAACCTTAGTATAGTCGTA
ATTCAGTCGTGGGGAGTGGCTTCTCTTCTCTTGCTATATTATGGGGGGTA
TACGGGGTTTCTGATATCCGAAATTCCGAGCATTTTTGACCTGATTTCTG
ATATTCCCCAAAAATATTGCGCTAATTCCGATACcgaattatattttttt
ctgtagacaattttcacttaaagaaaaacttttctatTCCTGCCCATAAA
ATCAAGGAAGAAACTGTTgggaaaagaatatttttgccaCATACAGTACA
ACTATTACACCCTAATTGTTTGTTATGCTTTACCTAGCAGAGCCCTTTTT
TCTCTACCGTACCATGACaactctttattttttataattgcaTGTCACGT
TTGCATTTTCAATTCATAACCTCCAAGCAATTTTCTAAAACAGTGATTTC
TTTTCTCAATAGGTCAAGAATATCAAGAGGCTGGGAGGGTCTAACTACGT
TGACATGGTCAACATCACACTTGACAGGTAACTTTTACCATTATGGACGG
TTCTATTTTCTATATCCAGTAATGTTTCTTGGTCATGGTATCCAGGATAC
TCACCACTATAATGAAGTCAGATATATTTACGAAGTTAtgcaatttttct
tcttttcacccAATCCGTCACATTTTCCAtcgtttaagggctctgaccat
cgtcaatatattgattttggtatttgagcataaaagttatgtttcaggtt
cctttacacttttaacaaagaattaactttacaaattgctttttaatcca
ATCCCTTAgaagtaattaagaatttgattgcaaaaatgaggttatgaact
ttaaaaagattctaCTACTtccaaaccttatttttagaattatgaCGATA
CGATTCCAAAGCGAGTGGAATTTGGATGGGCGTAATAACAAGAGAGCGTT
CAAGGACACAAAATTATGTTCAGCAATAACAGGTACATTTTTCATGTCTC
TTTGGTTTCAAGTTATATAAACTGATATGGGTTTTATCAAAACACTTCTT
TCGCAGAGGATTGATGAATTTCCTGGAAATCAAAGCATTGTGAGAATGAG
ATAAACTTTATTAAAGATTTACTAAAGGCTAAAGCATATCGAgctgataa
aaataaataaaaatgagtaGATATGATACCCCTGCATCAGGCATATTGAA
TCCTCTCATCGAATCACTTTCTAAGGTTAGTCATCAAATTAGTGACCTAC
ACCGTATGTAAGgccattttcaaacaaacaagaagtaaaaacctttcttt
ttatcaattattttgaatttgttttaaaattcgacccttgcagtgctatc
tcacagaaacacacccttacagtgcattttgggatgctgaaaaaccccac
ccttaagcccGGCACATGACATAGGCCAGATCACATTAGTGccccccccT
CCCCGGGTTTTCAGATCAAGTTAAAATCCGTCTTTTTAATATGATAGTGC
ATGAAAAGTTTTAATAATTATCTATTTCTCATAGATGCAGTCCTCGCGGC
ATTCCCAAAGACGGcggatgcaacagatcagaagaTTAAGTCTGCCATCG
GAAAGCATTTAAAGCGTGCACCTTTCAAGaagggtggtacaggaaaacta
aataaatag Coding sequence (CDS) from alignment at sc0000257_pilon:146398..149356+ >XLOC_017782 ID=XLOC_017782|Name=XLOC_017782|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1032bp|location=Sequence derived from alignment at sc0000257_pilon:146398..149356+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTCAGTCGCAAACTTAGTGACAGATTGACATCACTTGAAAATGA
ATGTCAGTCGCAAACTTAGTGACAGATTGACATCACTTGAAAataATGTT
GAAGGTGTCAAGGGGCGTCAACATAAATTGATGGAAATGCTTGTCAAGAT
CCACGAGCTGCTAAAATTTCGTGATCAGTCAGCTGCGCGCGATTCAACGA
TCCCATCCATTGAGGATGAAAACGATTTTGAATCCGTTGAACACGCCCTG
ATGGATGATTCAACAAGAAATGAATTTataATGTTGAAGGTGTCAAGGGG
CGTCAACATAAATTGATGGAAATGCTTGTCAAGATCCACGAGCTGCTAAA
ATTTCGTGATCAGTCAGCTGCGCGCGATTCAACGATCCCATCCATTGAGG
ATGAAAACGATTTTGAATCCGTTGAACACGCCCTGATGGATGATTCAACA
AGAAATGAATTTGTCAAGAATATCAAGAGGCTGGGAGGGTCTAACTACGT
TGACATGGTCAACATCACACTTGACAGGTCAAGAATATCAAGAGGCTGGG
AGGGTCTAACTACGTTGACATGGTCAACATCACACTTGACAGaattatga
CGATACGATTCCAAAGCGAGTGGAATTTGGATGGGCGTAATAACAAGAGA
GCGTTCAAGGACACAAAATTATGTTCAGCAATAACAGaattatgaCGATA
CGATTCCAAAGCGAGTGGAATTTGGATGGGCGTAATAACAAGAGAGCGTT
CAAGGACACAAAATTATGTTCAGCAATAACAGATGCAGTCCTCGCGGCAT
TCCCAAAGACGGcggatgcaacagatcagaagaTTAAGTCTGCCATCGGA
AAGCATTTAAAGCGTGCACCTTTCAAGaagggtggtacaggaaaactaaa
taaatagATGCAGTCCTCGCGGCATTCCCAAAGACGGcggatgcaacaga
tcagaagaTTAAGTCTGCCATCGGAAAGCATTTAAAGCGTGCACCTTTCA
AGaagggtggtacaggaaaactaaataaatag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000257_pilon | genome | sc0000257_pilon:146398..149356 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 394-516:2837 |
| Aaloc | 298-390:2189 |
| Aaloc | 232-294:1763 |
| Aaloc | 49-231:550 |
| Aaloc | 1-45:1 |
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